| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485828
Identifier: 124485828
GI number: 124485828
Start: 1007949
End: 1008761
Strand: Reverse
Name: 124485828
Synonym: Mlab_1008
Alternate gene names: NA
Gene position: 1008761-1007949 (Counterclockwise)
Preceding gene: 124485829
Following gene: 124485820
Centisome position: 55.89
GC content: 43.67
Gene sequence:
>813_bases ATGAATCTTAATGAAATCAGAAAAGAATGGATTGCACATAACACGAACCCAGCGTCCGAAATTGAATTATGGGATTCACA GGCAGAGGATCCTACCTACCATCAGATGCCCACATTTCAGGACAATAAATTCCTGCAGTTGTTGGAACAGGAACACATGA TTGACAGTACCTCTGACGTACTGGATATCGGGTGCGGCGCCGGTGTGTATTCTCTTGCATTGGCTCAGCGTGTACAATCC GTAACAGGCGTTGATTTTTCCCCGAACATGATTCAGAAAGCACAGGAGAAGTTAACGGAACATCAAAAAACGAATGTGGT TTTTACGTGTAAGGATTGGAATGCCGTGGATCTCGAACAGGAAGGATTCAAAGAGCGTTTTGATTTGGTTTTTGCCCATA CCTCGCCGGCCATATCTGATGCAGCCACATTTGAAAAAATGAATGCATCCAGCAAACGTTTCTGTGCTGTATCCAATCCG ACCAAAATGATTGAACCGGTCATGTCGGAGGTCCATAAAATTGCAGGAGTAAAAGAAGATGAAGCAAGTTGCGGAAACAC GCTTATCTACCAGCTGGACATGTTATTCCAGATGGGGTATTTGCCGAAACTTGCATACGAGAATCAGATCTGGAAAATGG ATCAGTCATACGAGGATGCCTGTTCCTATTATCTGGGCCGAACAACATATGCAAAACCACTGACGGAAGATGAAAGTAAT GCCGTTAAGGAATATCTCTCTTCGATTACAAAGGATGGACGGATTACCGATCAGATAAATGCGACGGTCACTACGCTCTA TTGGGAAAAATAA
Upstream 100 bases:
>100_bases TTGTGAGTATTATTTAAAAAAATGTTATCTGTGGGCATTGATGGACTGCACAGAGAACAAGATGACCACTATCTAACCAT AAAAAAAGGAGAAACATTAC
Downstream 100 bases:
>100_bases ATCCTTTAAAGGAAATGGCGGGGATCTCCCCGTCATTTCATCCAATTAAAGATAATATTTACCAGTACAGATCGCCGGCG TAATCACGATAACTGCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; PfkB-Family Carbohydrate Kinase; Methyltransferase Domain Protein; RNA Cap Guanine-N2 Methyltransferase
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNLNEIRKEWIAHNTNPASEIELWDSQAEDPTYHQMPTFQDNKFLQLLEQEHMIDSTSDVLDIGCGAGVYSLALAQRVQS VTGVDFSPNMIQKAQEKLTEHQKTNVVFTCKDWNAVDLEQEGFKERFDLVFAHTSPAISDAATFEKMNASSKRFCAVSNP TKMIEPVMSEVHKIAGVKEDEASCGNTLIYQLDMLFQMGYLPKLAYENQIWKMDQSYEDACSYYLGRTTYAKPLTEDESN AVKEYLSSITKDGRITDQINATVTTLYWEK
Sequences:
>Translated_270_residues MNLNEIRKEWIAHNTNPASEIELWDSQAEDPTYHQMPTFQDNKFLQLLEQEHMIDSTSDVLDIGCGAGVYSLALAQRVQS VTGVDFSPNMIQKAQEKLTEHQKTNVVFTCKDWNAVDLEQEGFKERFDLVFAHTSPAISDAATFEKMNASSKRFCAVSNP TKMIEPVMSEVHKIAGVKEDEASCGNTLIYQLDMLFQMGYLPKLAYENQIWKMDQSYEDACSYYLGRTTYAKPLTEDESN AVKEYLSSITKDGRITDQINATVTTLYWEK >Mature_270_residues MNLNEIRKEWIAHNTNPASEIELWDSQAEDPTYHQMPTFQDNKFLQLLEQEHMIDSTSDVLDIGCGAGVYSLALAQRVQS VTGVDFSPNMIQKAQEKLTEHQKTNVVFTCKDWNAVDLEQEGFKERFDLVFAHTSPAISDAATFEKMNASSKRFCAVSNP TKMIEPVMSEVHKIAGVKEDEASCGNTLIYQLDMLFQMGYLPKLAYENQIWKMDQSYEDACSYYLGRTTYAKPLTEDESN AVKEYLSSITKDGRITDQINATVTTLYWEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30748; Mature: 30748
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNEIRKEWIAHNTNPASEIELWDSQAEDPTYHQMPTFQDNKFLQLLEQEHMIDSTSDV CCHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH LDIGCGAGVYSLALAQRVQSVTGVDFSPNMIQKAQEKLTEHQKTNVVFTCKDWNAVDLEQ HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHH EGFKERFDLVFAHTSPAISDAATFEKMNASSKRFCAVSNPTKMIEPVMSEVHKIAGVKED HHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCC EASCGNTLIYQLDMLFQMGYLPKLAYENQIWKMDQSYEDACSYYLGRTTYAKPLTEDESN HHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHH AVKEYLSSITKDGRITDQINATVTTLYWEK HHHHHHHHHCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MNLNEIRKEWIAHNTNPASEIELWDSQAEDPTYHQMPTFQDNKFLQLLEQEHMIDSTSDV CCHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH LDIGCGAGVYSLALAQRVQSVTGVDFSPNMIQKAQEKLTEHQKTNVVFTCKDWNAVDLEQ HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHH EGFKERFDLVFAHTSPAISDAATFEKMNASSKRFCAVSNPTKMIEPVMSEVHKIAGVKED HHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCC EASCGNTLIYQLDMLFQMGYLPKLAYENQIWKMDQSYEDACSYYLGRTTYAKPLTEDESN HHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHH AVKEYLSSITKDGRITDQINATVTTLYWEK HHHHHHHHHCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA