| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485739
Identifier: 124485739
GI number: 124485739
Start: 912493
End: 914316
Strand: Reverse
Name: 124485739
Synonym: Mlab_0917
Alternate gene names: NA
Gene position: 914316-912493 (Counterclockwise)
Preceding gene: 124485740
Following gene: 124485738
Centisome position: 50.66
GC content: 54.93
Gene sequence:
>1824_bases ATGACCGACGATCCTGTTGCAACCGCGAAAAACCTCTCAGTCGGCATGGAACTTTTCAATGCCGGAAAATATTCGGAGGT CATCTCCTTTTCATCCGGCACGAGCGACCCCGCTCTCCTTCTTTTAGCTGCCAGAAGCTACATGGAAACAGGTCTCTACG ACACCGCCGGATCCCTTTTGAAAGATCTCATCCGGCTCATGCCGGCTTCTTCGTATCTGCACAGTTATCTCGGTCTCGTT CTTGAACATTCGGATACGATCAAAGCCGCCGAAGAGTATGCGACCGCCCTGATCCTCGACCCGGAGAACAAAACCGCTCT TCGAAGATATTCGTCTCTTCTTCTCGCAAACGAGGATCTGCGTGGCGCCATTCCCTCGCTTCGTGCTCTGGTCAGGCTGG AAAACCGCCCCGAAGACATCAGAACACTTATGCAGACGCTTACCCGCGTCGGCGAGCCGAGCGAAGCGATTGCTCTCCAT ATCCAGAACTTCGGCGGCGAGACATTCAGTCACGAGTACATCGATGCACTGTATACGGAAAAGGAGTATCAGAAGGCGAT GCAGCTTTCCCTTCGGGCATGGAACGCCGTCAAAGACACGGTCTATCTCAGGCAGAGTCTCGAGGCGCTTGCCGCACTCG ATCCGGCCGGGGCCGAGCGGGCATACCGCTCGGCGCTCGACAGTCTCGAAGAGGCAGGCGTCGAAGACGAAACCGTTTCG CAGATCCGGTTCTCCTACATCCTTCTCGAAAAACTTCTCGGGAACTATACCTCTGCGAGGTATGAGCTGGGTGAACTTCT CAAAACCGCAAACGATCCGGTATACCGCCTGCTTTTCGCCGAACTCGAGTCACGTCTTGAAAACGACGATGCGGCGAACA GCGTGTACCGGGGTTTGATCACCCAGCTCTGCAGTGCCGACGACGCCGATCCACTTCTTCAGGAACTGGTCATCTCCAAA TTCACCGCATTTCTCTCGACCGTACGCACGAAAGAAGAGGTGGCTGGAATCATCAGCGTCATCCTCTCGCCGTATCCGAC CCCGGTATGTCTTGCCTGGATCGGCAAAGCATACGAAGACGCCGGCTCCCTTTCGCAGGCACGCGACTGGTACTACCGTG CCTACCGTGCGGACTTCATCAAAGGCGGCATCTCCTATGCCGGTTTTCTCAAACGGAGCGGGGACGAACGTGAGTGCGAG ACGACGATCCGGTATATGGTCGCGAATACCGTTAAAGTCCGCGACATCGAGACGATCGCCGATGCCGTCTTCAACGGCGG GGAAGAGATCTATAAAATTGCCAAAGCCAAGGATATGATCATCAAAAAGCTCGGCAGCGTCACGGATCGGCTCTCTTCGA ACGGCCGCGAGATGCTTTCGGCAGGATATCTGTATTCTGCAGTCGATTCTTTGGAGCGGCAGGATTACGAGACCTGCAAA TGGTGCTGTCTTGCAGGAATCGACGTCCTTCCCTGCTATCCTGAAAAGATCCGCGTCGAGGATTTCATGGATGTCCTTTC GCGTCTGAAAGGCCGGGTGCTCGCCGAGCGTCCGGTCATCGTTGAAACACAGGAAGAAGAGGAGGAGCCGGATGTCCAAA ACAGCGATCTTTCGTTTCTCGATGAACGCGAGTCGACTGTCTTCATTTTCTTAAAAGAGCACCGCGAAGCAACGGAAATG GATCTTCGCGCCGTTCTCGAGACCCGGCGGGTCACCGGGATCGTAAACTCGATGCTGGCGAAACTTGCCGAACACGGGAT CTCTTTAATAGAGAAACGCGGTGTGGGCGAACGCGGCGAGGTATACGGCTATGTCGGAACATAA
Upstream 100 bases:
>100_bases GGATAAAGTCGTCGCTGACGGCAGCATTGTCACTGCCCAAACCCCCTTCGATGCCGAGGAGTTCGGACGCGCCATCCTCT CGGTAATACGCTGAAAAAAC
Downstream 100 bases:
>100_bases CGGACACATTGACCGAAAACTGGAAAGTATCGGGATAATCAATGCTCTTCGCCGGGGAACGGTGCCTCAGGCGGGACTTG CCCGTCTCGCGGTCGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLLKDLIRLMPASSYLHSYLGLV LEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDLRGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALH IQNFGGETFSHEYIDALYTEKEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLITQLCSADDADPLLQELVISK FTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYEDAGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECE TTIRYMVANTVKVRDIETIADAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFLDERESTVFIFLKEHREATEM DLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGEVYGYVGT
Sequences:
>Translated_607_residues MTDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLLKDLIRLMPASSYLHSYLGLV LEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDLRGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALH IQNFGGETFSHEYIDALYTEKEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLITQLCSADDADPLLQELVISK FTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYEDAGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECE TTIRYMVANTVKVRDIETIADAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFLDERESTVFIFLKEHREATEM DLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGEVYGYVGT >Mature_606_residues TDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLLKDLIRLMPASSYLHSYLGLVL EHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDLRGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALHI QNFGGETFSHEYIDALYTEKEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVSQ IRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLITQLCSADDADPLLQELVISKF TAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYEDAGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECET TIRYMVANTVKVRDIETIADAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCKW CCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFLDERESTVFIFLKEHREATEMD LRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGEVYGYVGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67813; Mature: 67681
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLL CCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH KDLIRLMPASSYLHSYLGLVLEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDL HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHH RGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALHIQNFGGETFSHEYIDALYTE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEEEHHCCCCCCHHHHHHHHHHH KEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH TQLCSADDADPLLQELVISKFTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYED HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECETTIRYMVANTVKVRDIETIA HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHH DAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFL HHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCCCCCCCHHH DERESTVFIFLKEHREATEMDLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGE CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VYGYVGT EEEECCC >Mature Secondary Structure TDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLL CCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH KDLIRLMPASSYLHSYLGLVLEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDL HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHH RGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALHIQNFGGETFSHEYIDALYTE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEEEHHCCCCCCHHHHHHHHHHH KEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH TQLCSADDADPLLQELVISKFTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYED HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECETTIRYMVANTVKVRDIETIA HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHH DAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFL HHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCCCCCCCHHH DERESTVFIFLKEHREATEMDLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGE CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VYGYVGT EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA