| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485279
Identifier: 124485279
GI number: 124485279
Start: 433853
End: 434260
Strand: Reverse
Name: 124485279
Synonym: Mlab_0454
Alternate gene names: NA
Gene position: 434260-433853 (Counterclockwise)
Preceding gene: 124485287
Following gene: 124485273
Centisome position: 24.06
GC content: 52.94
Gene sequence:
>408_bases ATGGCATATACCTCCGCCTCGGATCTTGAACCTCTTGCCGATGAACTCTACGAAGCATCGGGGGATGATGATTTCAGACT CGCCGAACTCATTCGTCAGCTGCCTAAAGAGACGGCGGTCCGGCTCTGCACTTCGGACCTGACCAATGCCCTGCAGACCT ACATCTACGCATTCGAGGAGGAGCCGGAGATCGATATCTATGAACGTCTGCTGCTCCAGCCCTCTTCGCAGCTCCTGCGC GGGATTAAAATCGCCAATGTGGAGCTTTCCGAGATCATCTTCGGATTCGATAAAAAGAGTTCGCTGTTTTTCATCGCGGT CTGGGATGGAGAAAAATTCCTGAAAGCATTTTCCGGCCCGGGATCCTCCCGGGAAGCGGTGAAGTATGCAAAAGAGATGT CCGCCTAA
Upstream 100 bases:
>100_bases AAATAGTGCCCAGTCCACGTCCTCATTTCTCATGTCCTAACAATTAGGAAGAGATAGACATTATACTTTATTGATTCACG CAACAGAAAAGTACAGCGTA
Downstream 100 bases:
>100_bases CCTTTCGTGATCAGATCATAGCTGACATGCGCCGGCACGATCTCGGGCAGATCCCCCCACCGGCCGATCCAGTCGCCGAT CACCGCATACACGGCAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAYTSASDLEPLADELYEASGDDDFRLAELIRQLPKETAVRLCTSDLTNALQTYIYAFEEEPEIDIYERLLLQPSSQLLR GIKIANVELSEIIFGFDKKSSLFFIAVWDGEKFLKAFSGPGSSREAVKYAKEMSA
Sequences:
>Translated_135_residues MAYTSASDLEPLADELYEASGDDDFRLAELIRQLPKETAVRLCTSDLTNALQTYIYAFEEEPEIDIYERLLLQPSSQLLR GIKIANVELSEIIFGFDKKSSLFFIAVWDGEKFLKAFSGPGSSREAVKYAKEMSA >Mature_134_residues AYTSASDLEPLADELYEASGDDDFRLAELIRQLPKETAVRLCTSDLTNALQTYIYAFEEEPEIDIYERLLLQPSSQLLRG IKIANVELSEIIFGFDKKSSLFFIAVWDGEKFLKAFSGPGSSREAVKYAKEMSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15201; Mature: 15070
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTSASDLEPLADELYEASGDDDFRLAELIRQLPKETAVRLCTSDLTNALQTYIYAFEE CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPEIDIYERLLLQPSSQLLRGIKIANVELSEIIFGFDKKSSLFFIAVWDGEKFLKAFSGP CCCHHHHHHHHCCCHHHHHHCHHHCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHCCC GSSREAVKYAKEMSA CCCHHHHHHHHHHCC >Mature Secondary Structure AYTSASDLEPLADELYEASGDDDFRLAELIRQLPKETAVRLCTSDLTNALQTYIYAFEE CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPEIDIYERLLLQPSSQLLRGIKIANVELSEIIFGFDKKSSLFFIAVWDGEKFLKAFSGP CCCHHHHHHHHCCCHHHHHHCHHHCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHCCC GSSREAVKYAKEMSA CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA