| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485007
Identifier: 124485007
GI number: 124485007
Start: 165869
End: 167218
Strand: Reverse
Name: 124485007
Synonym: Mlab_0180
Alternate gene names: NA
Gene position: 167218-165869 (Counterclockwise)
Preceding gene: 124485009
Following gene: 124485005
Centisome position: 9.26
GC content: 49.19
Gene sequence:
>1350_bases ATGAAAATTATCTGCCATGCTCCCAGAGAGGATATAATACAGAAAAACAAAACCTATCATTATATTCCCATGAAAAAAAT CATCATCCCCTTACTCCTTGCAGTAATCATCATACTCATCTCCTGTACGGGATACTATTTCTTTTTCCTCAGCACAAACC CCCACATAACCCCCGACGACACCTATACCGGAAACCTCACCGCAGAATACACCTTCCCCTTCAAAGACGGCATAGTGAAC CTCTCCGTCTCCGTGCCGGCATCCGTCTATTACGGAGCACAGAACACAGAATCCAAATACCTTCCCTACACCAAAGCCGG CGATCTCTCATTCTATGCAGATCTCACCAACGATCCCCTGCAGGAAGAGATGTACACCCAGATCCTCGATCAGACCGAAA CCGTCAGACAATCATGGGATCTCACGGACGACGAATACATCGAACTGCTTGCAACCTTCGTCCAGAGCATCAATTACAGT TCGGAAAGTGACTTCCGCTATCCGATCGAGACCGTTATCGGAGAATTCGGCGACTGCGACGACAAAAGCACGCTTCTCGC GGGGCTCCTCACGCGTTCCGGATATAATGCCGTACTCCTCATCTTCGAAGAAGAGAGCCACGCAACGGTCGGGATCAGAA CAAACGACTCGACCGCTTATCCAAACGCCGAAGGCTACTCGGTCATCGAAACCACCGACTACAGTTATGTAACGGACCGA TCCTTCACCTTCGAAGACGGGGCCTCGCTTAACAGCACGCCCGTCATCGTCAGTGTCGGGACGGGAGATACAACCTACAC CTCCGGTTATCAGGTCGAGGCGATCCTCGCCTATAAAGACACGGCAGATGCCAAAATCGACCAGCTCGCAAGTGAAACAG ACACAAAAACCGGAAACCTCGAATCGATGGGAGACACGCTCACCGGGTATGAAACCCGACTGACCTCTCTCGAATCATTG ATGAACACTGCAGTATCCTCGTACAACTCGTATATCGATCTGGCAAATGCGATCACTAAAGAGCAGAAAAAGCTGAACAG CGATCTCAATGCAAATAAAATAAGCTACACGGAGTATTCGTTGGAATGGGAAGCGCTGGAAGCGGAATATGCGGGATATA TGGAATTGGCAAATGAGGCTTTGGACGAGTATAATGCCTATTACGATGAGTATCAGACACTCTACGCCGAGTATACATCC TACTATTCAACATACAGCAGTGCCTACACCGATTACAGCGGTACGATCGAACTGCAGAACGGGTATGTGGACATCTATAA TCTCATAATCACGGAACCGTATAACCGGGCCTATCTGTACCGGACCGTGCTGGAAGCCACGGGTCTTTGA
Upstream 100 bases:
>100_bases GCTATTGCAAAACTGCTCCCGATATTTGTCTCATAAATATTAGCCACCAGAGGAGAAAAACTTGGTCCACTTTGGAGGCC TGATTTCGAATGGAAACCGC
Downstream 100 bases:
>100_bases GAAGGAGTTCGGGATAAAAAAAAGATACGGGAATGATGTGTTTTCCCGTCGAATCACTTGCGGATAAGTTTGTTCCAGCT TAACTTTTCGATTCCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDDTYTGNLTAEYTFPFKDGIVN LSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPLQEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYS SESDFRYPIETVIGEFGDCDDKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNLESMGDTLTGYETRLTSLESL MNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYSLEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTS YYSTYSSAYTDYSGTIELQNGYVDIYNLIITEPYNRAYLYRTVLEATGL
Sequences:
>Translated_449_residues MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDDTYTGNLTAEYTFPFKDGIVN LSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPLQEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYS SESDFRYPIETVIGEFGDCDDKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNLESMGDTLTGYETRLTSLESL MNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYSLEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTS YYSTYSSAYTDYSGTIELQNGYVDIYNLIITEPYNRAYLYRTVLEATGL >Mature_449_residues MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDDTYTGNLTAEYTFPFKDGIVN LSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPLQEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYS SESDFRYPIETVIGEFGDCDDKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNLESMGDTLTGYETRLTSLESL MNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYSLEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTS YYSTYSSAYTDYSGTIELQNGYVDIYNLIITEPYNRAYLYRTVLEATGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50627; Mature: 50627
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDD CEEEECCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC TYTGNLTAEYTFPFKDGIVNLSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPL CCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCH QEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYSSESDFRYPIETVIGEFGDCD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC DKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR CHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEECC SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNL CEEECCCCCCCCCCEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCH ESMGDTLTGYETRLTSLESLMNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE LEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTSYYSTYSSAYTDYSGTIELQN EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GYVDIYNLIITEPYNRAYLYRTVLEATGL CEEEEEEEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDD CEEEECCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC TYTGNLTAEYTFPFKDGIVNLSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPL CCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCH QEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYSSESDFRYPIETVIGEFGDCD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC DKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR CHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEECC SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNL CEEECCCCCCCCCCEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCH ESMGDTLTGYETRLTSLESLMNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE LEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTSYYSTYSSAYTDYSGTIELQN EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GYVDIYNLIITEPYNRAYLYRTVLEATGL CEEEEEEEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA