| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124484936
Identifier: 124484936
GI number: 124484936
Start: 99630
End: 100403
Strand: Reverse
Name: 124484936
Synonym: Mlab_0108
Alternate gene names: NA
Gene position: 100403-99630 (Counterclockwise)
Preceding gene: 124484938
Following gene: 124484908
Centisome position: 5.56
GC content: 50.78
Gene sequence:
>774_bases GTGTCAAGACTTATATTCAGCCCAATATCCATCTGGGTCCTGTTTGCCCTGATTCTTCTCGTCGTAATAGGATTACCTTT ACTGTTCTTCGGACTCATCGGAGCGGCACTTGGGAATCTGGGATTCGGGTTCTGGATGATCGTTCTTTTGATCATAGCAA TCGTTGTTGGAAGTTTTATCAATATTCCTCTTGGAACGCTGAAACCAAAGAGTCCAAAACCAAAAGAAGAGCCGACCACG AGAAAACCAACCGGACAGTATGCCCCATCAATGTATGATAAGATGTACCGCACAGACCGGTTCGAACCCGAACCGTACAC CTCCGGATCTTCACGGGGAACACAGATATCTATAAACGTCGGTGGTGCTGTGATCCCGATCCTGATCTCGATGTACATCA TCCTAATGGGAGCTTTCGGCACAATATCCAATGACCCGTGGTATCTTGTAAAGATGGCAGGGGGCCTGATCATCACTACG GTGTGGGTGTATCTCGCTGCAAAACCCGTGCGAGGCATTGGGATCGCGACGCCATTCTTTATCGGCCCGATCGTAACACT CGCAGCGGCGTTGATTCTCGGCGGAGGGTTCGGGCTTCCGGCAGCAGGGATCGCCTATGTGGCGGGAACACTTGGGACGC TGATCGGCGCCGATCTTCTGCACCTAAAGGATGTTCCAACACAGGAAACCTCGATGCTTTCAATCGGAGGGGCCGGAACC TTTGACGGGATTTTCCTTACAGGAATCATCACGGCACTGATCGCTTCATTCTAA
Upstream 100 bases:
>100_bases GGCTAAATTACCTTAATGAATATGACATGACAGAATATTAAGATAGCGATTGGTTGGTGACCAGATAGATTTTATATCAG CCCTCACAAAACAATTACCA
Downstream 100 bases:
>100_bases ATCAACTTCATTTCCCTTTTTTTCTGGCAAATACCTGGCTTCCCCGCATATCCAACCGATCCACATATCGCATGTTAAGG GGAGAGAAAAATGACCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFINIPLGTLKPKSPKPKEEPTT RKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINVGGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITT VWVYLAAKPVRGIGIATPFFIGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT FDGIFLTGIITALIASF
Sequences:
>Translated_257_residues MSRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFINIPLGTLKPKSPKPKEEPTT RKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINVGGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITT VWVYLAAKPVRGIGIATPFFIGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT FDGIFLTGIITALIASF >Mature_256_residues SRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFINIPLGTLKPKSPKPKEEPTTR KPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINVGGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITTV WVYLAAKPVRGIGIATPFFIGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGTF DGIFLTGIITALIASF
Specific function: Unknown
COG id: COG4089
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27108; Mature: 26977
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH NIPLGTLKPKSPKPKEEPTTRKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC GGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITTVWVYLAAKPVRGIGIATPFF CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHH IGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC FDGIFLTGIITALIASF HHHHHHHHHHHHHHHCC >Mature Secondary Structure SRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH NIPLGTLKPKSPKPKEEPTTRKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC GGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITTVWVYLAAKPVRGIGIATPFF CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHH IGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC FDGIFLTGIITALIASF HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA