| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is paaD [H]
Identifier: 124266183
GI number: 124266183
Start: 1051690
End: 1052238
Strand: Direct
Name: paaD [H]
Synonym: Mpe_A0990
Alternate gene names: 124266183
Gene position: 1051690-1052238 (Clockwise)
Preceding gene: 124266182
Following gene: 124266184
Centisome position: 26.0
GC content: 75.05
Gene sequence:
>549_bases GTGAGCGCGGTGACGACGGCGCGCGAGGCGGTCGACCGTGACGACGCCGTGCGTTGCGAGCAGGCGTGGGCGGCACTGGA CGAGGTGCTCGATCCCGAGGTGCCGGCGCTGTCGGTCTGCGATCTCGGCATCGTGCGGGCGGTCCGCGCCGAGGGTGCGG GCCTGGAGATCGTGCTGACGCCCACCTACTCGGGCTGTCCGGCCACCGAGGTGATCGAGCACCAGGTGCGGGCCGCGATC GACGATGCCGGCCTCGGGCCCGCCCGCGTGACGCTGCAGCGCGCGCCGGCCTGGACCACCGACTGGATCAGCGAGGCCGG CCGCCGCAAGCTCGCCGCCTACGGCATCGCACCGCCGGGGCCGTCCGTCCGACCGGACGGTGCGGCGCCGATCCGCTTCT TCGGCCGCGGCAGACCGGCGCCCCTGGCCTGCCCGCGCTGCGGCAGCCGCCAGACCGAGCGGCTGTCGGCCTTCGGGTCG ACCGCCTGCAAGGCGCTGTACCGCTGCCTGAGCTGCCGCGAGCCGTTCGAGCACTTCAAGCCGCTCTGA
Upstream 100 bases:
>100_bases GCTATACGAGCACCGGCAGCCGCGGCGTGCACAGCGAGCACATGGGCTACCTGCTCGCCGAGATGCAGTACCTGCAGCGG GCCTACCCGGGAGGTGCGTG
Downstream 100 bases:
>100_bases TCGCACTGGTTCATGAGCCTGCTTTTCCATCCGTTGCGCGTGCGTGCCATCGAGCCCGACACGGCCGAGGCCGTGGTGGT GACGTTCGACGTGCCGCCTG
Product: putative ring oxidation complex protein 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSAVTTAREAVDRDDAVRCEQAWAALDEVLDPEVPALSVCDLGIVRAVRAEGAGLEIVLTPTYSGCPATEVIEHQVRAAI DDAGLGPARVTLQRAPAWTTDWISEAGRRKLAAYGIAPPGPSVRPDGAAPIRFFGRGRPAPLACPRCGSRQTERLSAFGS TACKALYRCLSCREPFEHFKPL
Sequences:
>Translated_182_residues MSAVTTAREAVDRDDAVRCEQAWAALDEVLDPEVPALSVCDLGIVRAVRAEGAGLEIVLTPTYSGCPATEVIEHQVRAAI DDAGLGPARVTLQRAPAWTTDWISEAGRRKLAAYGIAPPGPSVRPDGAAPIRFFGRGRPAPLACPRCGSRQTERLSAFGS TACKALYRCLSCREPFEHFKPL >Mature_181_residues SAVTTAREAVDRDDAVRCEQAWAALDEVLDPEVPALSVCDLGIVRAVRAEGAGLEIVLTPTYSGCPATEVIEHQVRAAID DAGLGPARVTLQRAPAWTTDWISEAGRRKLAAYGIAPPGPSVRPDGAAPIRFFGRGRPAPLACPRCGSRQTERLSAFGST ACKALYRCLSCREPFEHFKPL
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510939, Length=164, Percent_Identity=48.1707317073171, Blast_Score=153, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 - InterPro: IPR011883 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 19471; Mature: 19340
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVTTAREAVDRDDAVRCEQAWAALDEVLDPEVPALSVCDLGIVRAVRAEGAGLEIVLT CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE PTYSGCPATEVIEHQVRAAIDDAGLGPARVTLQRAPAWTTDWISEAGRRKLAAYGIAPPG CCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC PSVRPDGAAPIRFFGRGRPAPLACPRCGSRQTERLSAFGSTACKALYRCLSCREPFEHFK CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC PL CC >Mature Secondary Structure SAVTTAREAVDRDDAVRCEQAWAALDEVLDPEVPALSVCDLGIVRAVRAEGAGLEIVLT CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE PTYSGCPATEVIEHQVRAAIDDAGLGPARVTLQRAPAWTTDWISEAGRRKLAAYGIAPPG CCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC PSVRPDGAAPIRFFGRGRPAPLACPRCGSRQTERLSAFGSTACKALYRCLSCREPFEHFK CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC PL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]