| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is insH10 [H]
Identifier: 124266047
GI number: 124266047
Start: 890301
End: 891350
Strand: Direct
Name: insH10 [H]
Synonym: Mpe_A0854
Alternate gene names: 124266047
Gene position: 890301-891350 (Clockwise)
Preceding gene: 124266046
Following gene: 124266048
Centisome position: 22.01
GC content: 65.14
Gene sequence:
>1050_bases ATGGCGTGCGGCGAATTCAGCGGCGATGATGCTGCCATGAAGCAGACGAGTTTTGCCACTGCCGAGTACGCCGGCAAGAA GCGCCAGACGCGCCGGGAGCGCTTCCTGGCCGAGATGAACGTGGTGGTTCCGTGGGCGCGGCTTGAGGCGCTGATCGAGC CGCACTACCCGAAGAGCGGCAAGGTGGGCCGACCGCCGATTGGCGTGCCGCGGATGCTGCGCATGTACTTCCTGCAGCAG TGGTACACGCTGGCCGACGAGGCACTGGAAGACGCGCTGTACGACAGCCAGGCCATGCGCGAGTTCATCGGCATCGACCT TGGGCGGGAGAACGTACCCGACGCCACAACGCTGCTGAAGTTCCGCCGCCTGCTCGAGCAGCACGACTTGACGTCGGCCA TCCTGGCCGAGGTCAACGCGCACCTCACCGAGCGTGGGCTGCTGATGCGCCAGGGCACGGTGGTGGACGCCACCATCATT GCCGCGCCAAGTTCGACGAAGAACGAGGACGGCAAGCGCGACCCCGAGATGCACCAGACCAAGAAGGGGAACCAGTGGCA CTTCGGGATGAAGATGCACTCGGGCGTGGATGCCGAGTCGGGTCTGATCCACAGCGTGGTCTGCACCGCGGCCAACGAGG CTGACGTGGCGCACGCGCACGAACTGCTGCATGGCCAGGAGAGCCAAGTTCACGGCGACAGCGGCTACACCGGCATCCAG AGGCGAGACGAGATCACGACGGCGCAGGAAGAGGGCAGGCTGCGCCAGGACATGGATTGGCGTATCGCCATGAAGCGCGG CCAACTCAAGGCCATGCCCGAAGGGCCGGCCAAGGCGATGCACGAGTGGTTCGAACGGCGCAAGGCTCAGGTGCGGGCCA TCGTCGAACACCCGTTCCACGTCATCAAGAACCTGTTCGGCTACCGCAAGGTCAGCTACCGCGGGATCTCCAAGAACGAA GCTCGCGCGAAGGCGCACGCTGCGCTGGCCAACTTGTACATCGCCCGGCGCCGATTGCTGGCCCAAGGCCTCAGTGCGTC TGCTGCATGA
Upstream 100 bases:
>100_bases GGCACCATTTGAATCGATGTTCGCGCACAAGCGGCAAATTGTGTTTGTGCGATCTCGGGTTGAGCACTAGGGAAGCACTG ATTTATCCGTGCAGGCCACG
Downstream 100 bases:
>100_bases ACGGGGGCCTGAGAGCGGCCTCGAAGTGCCGCAGAAGGGGCTCATCGGTGCCACTTCTGAGTTCACGAGTCGCCATCAAC GCCCGCTGTCGGCCGAGTCG
Product: TIS1021-transposase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MACGEFSGDDAAMKQTSFATAEYAGKKRQTRRERFLAEMNVVVPWARLEALIEPHYPKSGKVGRPPIGVPRMLRMYFLQQ WYTLADEALEDALYDSQAMREFIGIDLGRENVPDATTLLKFRRLLEQHDLTSAILAEVNAHLTERGLLMRQGTVVDATII AAPSSTKNEDGKRDPEMHQTKKGNQWHFGMKMHSGVDAESGLIHSVVCTAANEADVAHAHELLHGQESQVHGDSGYTGIQ RRDEITTAQEEGRLRQDMDWRIAMKRGQLKAMPEGPAKAMHEWFERRKAQVRAIVEHPFHVIKNLFGYRKVSYRGISKNE ARAKAHAALANLYIARRRLLAQGLSASAA
Sequences:
>Translated_349_residues MACGEFSGDDAAMKQTSFATAEYAGKKRQTRRERFLAEMNVVVPWARLEALIEPHYPKSGKVGRPPIGVPRMLRMYFLQQ WYTLADEALEDALYDSQAMREFIGIDLGRENVPDATTLLKFRRLLEQHDLTSAILAEVNAHLTERGLLMRQGTVVDATII AAPSSTKNEDGKRDPEMHQTKKGNQWHFGMKMHSGVDAESGLIHSVVCTAANEADVAHAHELLHGQESQVHGDSGYTGIQ RRDEITTAQEEGRLRQDMDWRIAMKRGQLKAMPEGPAKAMHEWFERRKAQVRAIVEHPFHVIKNLFGYRKVSYRGISKNE ARAKAHAALANLYIARRRLLAQGLSASAA >Mature_348_residues ACGEFSGDDAAMKQTSFATAEYAGKKRQTRRERFLAEMNVVVPWARLEALIEPHYPKSGKVGRPPIGVPRMLRMYFLQQW YTLADEALEDALYDSQAMREFIGIDLGRENVPDATTLLKFRRLLEQHDLTSAILAEVNAHLTERGLLMRQGTVVDATIIA APSSTKNEDGKRDPEMHQTKKGNQWHFGMKMHSGVDAESGLIHSVVCTAANEADVAHAHELLHGQESQVHGDSGYTGIQR RDEITTAQEEGRLRQDMDWRIAMKRGQLKAMPEGPAKAMHEWFERRKAQVRAIVEHPFHVIKNLFGYRKVSYRGISKNEA RAKAHAALANLYIARRRLLAQGLSASAA
Specific function: Involved in the transposition of the insertion sequence IS5 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1787634, Length=322, Percent_Identity=49.0683229813665, Blast_Score=311, Evalue=5e-86, Organism=Escherichia coli, GI1788303, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1789921, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1789612, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1789355, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1788518, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1788342, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1787592, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1786877, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1786764, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1786453, Length=324, Percent_Identity=48.4567901234568, Blast_Score=306, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 - InterPro: IPR008490 [H]
Pfam domain/function: PF05598 DUF772; PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 39252; Mature: 39121
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGEFSGDDAAMKQTSFATAEYAGKKRQTRRERFLAEMNVVVPWARLEALIEPHYPKSG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC KVGRPPIGVPRMLRMYFLQQWYTLADEALEDALYDSQAMREFIGIDLGRENVPDATTLLK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH FRRLLEQHDLTSAILAEVNAHLTERGLLMRQGTVVDATIIAAPSSTKNEDGKRDPEMHQT HHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHC KKGNQWHFGMKMHSGVDAESGLIHSVVCTAANEADVAHAHELLHGQESQVHGDSGYTGIQ CCCCCEEECCHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC RRDEITTAQEEGRLRQDMDWRIAMKRGQLKAMPEGPAKAMHEWFERRKAQVRAIVEHPFH HHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VIKNLFGYRKVSYRGISKNEARAKAHAALANLYIARRRLLAQGLSASAA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ACGEFSGDDAAMKQTSFATAEYAGKKRQTRRERFLAEMNVVVPWARLEALIEPHYPKSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC KVGRPPIGVPRMLRMYFLQQWYTLADEALEDALYDSQAMREFIGIDLGRENVPDATTLLK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH FRRLLEQHDLTSAILAEVNAHLTERGLLMRQGTVVDATIIAAPSSTKNEDGKRDPEMHQT HHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHC KKGNQWHFGMKMHSGVDAESGLIHSVVCTAANEADVAHAHELLHGQESQVHGDSGYTGIQ CCCCCEEECCHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC RRDEITTAQEEGRLRQDMDWRIAMKRGQLKAMPEGPAKAMHEWFERRKAQVRAIVEHPFH HHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VIKNLFGYRKVSYRGISKNEARAKAHAALANLYIARRRLLAQGLSASAA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9097039; 9097040; 9278503 [H]