| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266048
Identifier: 124266048
GI number: 124266048
Start: 891334
End: 892158
Strand: Direct
Name: 124266048
Synonym: Mpe_A0855
Alternate gene names: NA
Gene position: 891334-892158 (Clockwise)
Preceding gene: 124266047
Following gene: 124266050
Centisome position: 22.04
GC content: 54.67
Gene sequence:
>825_bases GTGCGTCTGCTGCATGAACGGGGGCCTGAGAGCGGCCTCGAAGTGCCGCAGAAGGGGCTCATCGGTGCCACTTCTGAGTT CACGAGTCGCCATCAACGCCCGCTGTCGGCCGAGTCGCGGTCACGAAGCGGGTTGATCAGCGCTTCCCTAGTCCTCAGCG GGCTAGGGAAGTATCGAGTCACGATGCGAACGAATGGCTCAAAGGCGACATTTTTCTGGCATCCACTCATCTTCGCGATG ATGTGTATGTCCGTTGTCGTGGTCATTTTTTTTGTCGTGTACTTTGAGCGCACGAAGAATTTTCCAGACTCGGCGTGGGT TCAGGCGGGGGCGGCAGCAATCAGTCTATTCATTGTGATTGGTCTTGCGTTTTGGCAGGACCATCAACTTCGAGTGCGTG ATTTCGACGAACGGAAAAGGATCGTGGATGCTGCGTTCGCACCAACGATTGCCTTGGCGGAAGTTTTGATCTACGAAGTT GCTTGCGGGGCTACCTATCTTGAGGATCCCAGTGCAGCACGTGAACGCTTTGGAGAAACCGGCCAACCGCCGGTGTTGGA TGAGCTACTGAAAGACTTGAATAGTCAGTCAATTGGTGCGCTTGGTTCTATTGATGCATTCAGGGCTGCACTGTTAGTGC GCCAGAACTGCTTGTCGATGGTCAGGTGGTATCAGGTTATCGCTGGCGAATTCATGGCTAGCAGAGCTCGAGGTGATGAG AACATGTACCCCGGCCGCGCAAGATTGGAGGCGCAGCAGGGCTGCGCCGAGGCTCGAGGAGCGATTGACAAGCTAATAAT TGAGCGCGATCGACTAGTTGTTTGA
Upstream 100 bases:
>100_bases AGCTACCGCGGGATCTCCAAGAACGAAGCTCGCGCGAAGGCGCACGCTGCGCTGGCCAACTTGTACATCGCCCGGCGCCG ATTGCTGGCCCAAGGCCTCA
Downstream 100 bases:
>100_bases ATCGGGGTATTGATCGGCCTGGAATTTTTGCTGATCACCTATCTGACGCGAGGAGTTCGTTTGTGCTTTTGTGAGAGCCG TTGCGTCAATCGCGGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRLLHERGPESGLEVPQKGLIGATSEFTSRHQRPLSAESRSRSGLISASLVLSGLGKYRVTMRTNGSKATFFWHPLIFAM MCMSVVVVIFFVVYFERTKNFPDSAWVQAGAAAISLFIVIGLAFWQDHQLRVRDFDERKRIVDAAFAPTIALAEVLIYEV ACGATYLEDPSAARERFGETGQPPVLDELLKDLNSQSIGALGSIDAFRAALLVRQNCLSMVRWYQVIAGEFMASRARGDE NMYPGRARLEAQQGCAEARGAIDKLIIERDRLVV
Sequences:
>Translated_274_residues MRLLHERGPESGLEVPQKGLIGATSEFTSRHQRPLSAESRSRSGLISASLVLSGLGKYRVTMRTNGSKATFFWHPLIFAM MCMSVVVVIFFVVYFERTKNFPDSAWVQAGAAAISLFIVIGLAFWQDHQLRVRDFDERKRIVDAAFAPTIALAEVLIYEV ACGATYLEDPSAARERFGETGQPPVLDELLKDLNSQSIGALGSIDAFRAALLVRQNCLSMVRWYQVIAGEFMASRARGDE NMYPGRARLEAQQGCAEARGAIDKLIIERDRLVV >Mature_274_residues MRLLHERGPESGLEVPQKGLIGATSEFTSRHQRPLSAESRSRSGLISASLVLSGLGKYRVTMRTNGSKATFFWHPLIFAM MCMSVVVVIFFVVYFERTKNFPDSAWVQAGAAAISLFIVIGLAFWQDHQLRVRDFDERKRIVDAAFAPTIALAEVLIYEV ACGATYLEDPSAARERFGETGQPPVLDELLKDLNSQSIGALGSIDAFRAALLVRQNCLSMVRWYQVIAGEFMASRARGDE NMYPGRARLEAQQGCAEARGAIDKLIIERDRLVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30433; Mature: 30433
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLHERGPESGLEVPQKGLIGATSEFTSRHQRPLSAESRSRSGLISASLVLSGLGKYRV CCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCEEE TMRTNGSKATFFWHPLIFAMMCMSVVVVIFFVVYFERTKNFPDSAWVQAGAAAISLFIVI EEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GLAFWQDHQLRVRDFDERKRIVDAAFAPTIALAEVLIYEVACGATYLEDPSAARERFGET HHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHCCCC GQPPVLDELLKDLNSQSIGALGSIDAFRAALLVRQNCLSMVRWYQVIAGEFMASRARGDE CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NMYPGRARLEAQQGCAEARGAIDKLIIERDRLVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLLHERGPESGLEVPQKGLIGATSEFTSRHQRPLSAESRSRSGLISASLVLSGLGKYRV CCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCEEE TMRTNGSKATFFWHPLIFAMMCMSVVVVIFFVVYFERTKNFPDSAWVQAGAAAISLFIVI EEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GLAFWQDHQLRVRDFDERKRIVDAAFAPTIALAEVLIYEVACGATYLEDPSAARERFGET HHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHCCCC GQPPVLDELLKDLNSQSIGALGSIDAFRAALLVRQNCLSMVRWYQVIAGEFMASRARGDE CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NMYPGRARLEAQQGCAEARGAIDKLIIERDRLVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA