| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266040
Identifier: 124266040
GI number: 124266040
Start: 882602
End: 885274
Strand: Reverse
Name: 124266040
Synonym: Mpe_A0847
Alternate gene names: NA
Gene position: 885274-882602 (Counterclockwise)
Preceding gene: 124266041
Following gene: 124266037
Centisome position: 21.89
GC content: 72.05
Gene sequence:
>2673_bases GTGAACGCCGCCCCCAACGTCCAGGCCGCATTGAACGCGGCATGCCTGCGCATCCAGGCCACCGTCACGGCCGCCGCCGA ACGACTGGTGGAGACGCTCGCGTCGCAGTCGGCCTCGTTCGCGAGCATCACGACCCGCCAGCTGATGGCGAGCACGCAGT TCGACCTGCGCCGCAAGCTGCCCGACTTCACCCTGGTCTTCAGCGCCGGCCTACGTGACCGCGTGCTCGAGGCCGCCGAG CCGCGCAGCTCGACCCGCTCGCTGGCCACCACCTCGTGGGAGTCGCTGAGCCTGGTCGGCGACGACGAGGTGGACGAGCG CGTCTCGGCCGAGCGCCTGAGCATGCAGATCGTGCACGAGTGCGAATGGGAGATGCGCGAGCTCGACGGCTACATGGCCG CCCTGCTGCGCCACGGCGAACCCGACCCCGATCGCAACCCGCTGCGCCCCGAGATCATCGGCCGTGCGCTGCGCCGCGCG ATCCACGCCGTGAACGACGATCCGGCCTCGCACCGGCTGCTCGCCACCGAGTTCGGCCGCTCGCTGGCCACGGCGATGCG GGCCTGCTACGCCGGCATCATCGCCGACCTGCAGGCGCGCGGCGTCAGCCCGATCGGCCTGACCGTGAAGACGGTGCAGG GCCCCGGCAACGACCTGCCGCGCGAGGTGCTGCGCGAGAACTCCGGCTACCAGACCTCGGGCTTCCATGGCTCGGCCTTC CAGGCCTCGGCGCGCGACCTGGTCCAGGCCGAGCAGATGCTGCAGACGCTGTTCGGCATCGCGCTGCCCCAGGCGCTGCA GGCGGCCTCGGGGGCCGGCGCGCTGGGCCTGCCGTCCGGACCGGGCGCGCCGTCCGGATTCGGCAGCAGCCGGTCGGGGA GCAGCACCGGCAGCCGCGGCTACGGCGGCACCGGGAGCGGCTACGGAAGCCCCGGCGGCGGATCGGGCATGCCGAGCGGC GGCTCCGGCGGCGGATCGGGCTCGGGGGCCGGCGGCCGCGCCACCGGCCCGGGCGCATCGTCCGAGCGTTCGTCGGGCAC GGCCTACAACAACGATGCGCAGATGCTCGACATCCTGCGCCGCCTGGTGGTCGTGAACGCCACGGCCGGCGAGACGGCCG GCCTCGGCGCCGACCCACGGGGGGGCACCCTCCCCGCCGGCAGTTCGCGCCCCGGCCCCTTGTCCGGCGTCTCGGGGCCC TCCGGCATCACGCCGCTGGCCGGCCTGATGGCGGTGAACGTGATCCGCCAGCACCGCGACGAGCTGATGCGGGCCTCGTC CGGCACGCTCGACCACATGGTGATCGACGTGGTCGGCGCACTGTTCGACCAGGTGCTGTCGGACAGCAAGGTGCCGCCGC AGATGGCGCGCCAGATCGCTCGGCTGCAGCTGCCGGTACTGCGCGCGGCGCTGAAGGACGTGGGCTTCTTCAGCTCGCGG CGCCACCCGGTGCGGCGTTTCGTGAACCGCATCGCCTCGCTGGCGGCGGCCTACGAGGACCTCGACCAGGGCCCCGGCAA GGACTTCATCGAGCGCGTGCGCGCGCTGGTGCAGGAGATCGTCGAGGGCGACTTCGACCAGATGGACCTGTACGAGTCCA AGCTGCAGGCGATCGAGGCGCTGGTGCAGGAGCAGAGCGCGCGCGATGTCGGCACGCATGCGACGGCCGCCACGCTGCTC GACAACAAGGAAACGCAGCTGCGCATCCAGCAGCGCTACATGCGCGAGCTCAAGTCGCACCTGGAGCCGGTTGCCCTGCC CGGCTTCGTGCGCGACTTCCTAGCGCAGGTGTGGAGCCAGGTGCAGGTGCAGGCGGCCGGCCCGTTCGGTTCGCCAGAGC TGGCGCAGCGCGCCAACCGCGCAGCGCGCGAGCTGGCGCTCAGCGTGCAGCCCAAGGGCGAGCCGCAGCTGCGCAAGCAT TTCCTGATGGCACTGCCGCAGCTGATGAAGGACCTCAACGAGGGCCTGGAGCTGATCCGCTGGCCGGAGCCCGCCAAGAA GGACTTCTTCGGCAAGCTGCTGCCCGAGCACGCCGCGTCGCTGAAGACCGCGCCGCCGACAGACTTCGAGCAGCGCCAGC TCAAGCACTACCTCGACCAGGTCGAGAAGGTCTCGATCCCCACCGCCGACGAGCTCGCGCCGAGCGCGCATGCCGAACTG CCGCCGCCGCAGGAACATGCCGCGCCGCTGACCTTCTCGGCCGAGGAGGCCGAGAAGATCGGCCTGGTCGACGAGAACGC AGTCGACTGGGACGGCCAGGTGGACATCGACCTCGGCGAGGGCGGTCCGTCCGCCGAGGCGGAGGCCGGCGAGGTCGATG TGGTGCTGGAGGCCCTGGCGCCCGAGCCCGCCGAGCCGACGCACGGCCCGCAGCTGATCCACCACCTGCAGACCGGCATC GCCTACCGCATGCACGTGGAGGGCCGCTGGCAGCGCGTGCGCCTGAACTGGATCAGCCCGGGCCGGGCCTTCTTCGTGTT CACCCACGGCAAGGCCCACCAGAAGACGATCTCGATGACCTCGCGCATGCTCACCCGCATGTGCGACACCGAGCGCTTCC GCGCCTTCGAACAGGCCGAGCTGATCGAGCGCGCGACGGCGCGTGCCCGCAAGCAGCTGGCGCAGCTGGGCGGTGCGGCC CCGCGCAGCACGGCGACCAGCAGCCGTCTCTGA
Upstream 100 bases:
>100_bases GACATCGTGCTGTTGCGCGAGATCCGCGATGCCCTGAAGAAGTGACCCGCCTGCGGGCGCGCTGCCGGGGCACCGGCCCG CCCGCCTCCTTGCCGACCCT
Downstream 100 bases:
>100_bases GGCGCCCGGCGGTCAGCCAGCCGCGAGGCGGCGCGCCATCTGGCCGGCGGCGATCAGGCTGGACGGGTCGGCGCGGCCAC TGCCGACCCGATCGAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 890; Mature: 890
Protein sequence:
>890_residues MNAAPNVQAALNAACLRIQATVTAAAERLVETLASQSASFASITTRQLMASTQFDLRRKLPDFTLVFSAGLRDRVLEAAE PRSSTRSLATTSWESLSLVGDDEVDERVSAERLSMQIVHECEWEMRELDGYMAALLRHGEPDPDRNPLRPEIIGRALRRA IHAVNDDPASHRLLATEFGRSLATAMRACYAGIIADLQARGVSPIGLTVKTVQGPGNDLPREVLRENSGYQTSGFHGSAF QASARDLVQAEQMLQTLFGIALPQALQAASGAGALGLPSGPGAPSGFGSSRSGSSTGSRGYGGTGSGYGSPGGGSGMPSG GSGGGSGSGAGGRATGPGASSERSSGTAYNNDAQMLDILRRLVVVNATAGETAGLGADPRGGTLPAGSSRPGPLSGVSGP SGITPLAGLMAVNVIRQHRDELMRASSGTLDHMVIDVVGALFDQVLSDSKVPPQMARQIARLQLPVLRAALKDVGFFSSR RHPVRRFVNRIASLAAAYEDLDQGPGKDFIERVRALVQEIVEGDFDQMDLYESKLQAIEALVQEQSARDVGTHATAATLL DNKETQLRIQQRYMRELKSHLEPVALPGFVRDFLAQVWSQVQVQAAGPFGSPELAQRANRAARELALSVQPKGEPQLRKH FLMALPQLMKDLNEGLELIRWPEPAKKDFFGKLLPEHAASLKTAPPTDFEQRQLKHYLDQVEKVSIPTADELAPSAHAEL PPPQEHAAPLTFSAEEAEKIGLVDENAVDWDGQVDIDLGEGGPSAEAEAGEVDVVLEALAPEPAEPTHGPQLIHHLQTGI AYRMHVEGRWQRVRLNWISPGRAFFVFTHGKAHQKTISMTSRMLTRMCDTERFRAFEQAELIERATARARKQLAQLGGAA PRSTATSSRL
Sequences:
>Translated_890_residues MNAAPNVQAALNAACLRIQATVTAAAERLVETLASQSASFASITTRQLMASTQFDLRRKLPDFTLVFSAGLRDRVLEAAE PRSSTRSLATTSWESLSLVGDDEVDERVSAERLSMQIVHECEWEMRELDGYMAALLRHGEPDPDRNPLRPEIIGRALRRA IHAVNDDPASHRLLATEFGRSLATAMRACYAGIIADLQARGVSPIGLTVKTVQGPGNDLPREVLRENSGYQTSGFHGSAF QASARDLVQAEQMLQTLFGIALPQALQAASGAGALGLPSGPGAPSGFGSSRSGSSTGSRGYGGTGSGYGSPGGGSGMPSG GSGGGSGSGAGGRATGPGASSERSSGTAYNNDAQMLDILRRLVVVNATAGETAGLGADPRGGTLPAGSSRPGPLSGVSGP SGITPLAGLMAVNVIRQHRDELMRASSGTLDHMVIDVVGALFDQVLSDSKVPPQMARQIARLQLPVLRAALKDVGFFSSR RHPVRRFVNRIASLAAAYEDLDQGPGKDFIERVRALVQEIVEGDFDQMDLYESKLQAIEALVQEQSARDVGTHATAATLL DNKETQLRIQQRYMRELKSHLEPVALPGFVRDFLAQVWSQVQVQAAGPFGSPELAQRANRAARELALSVQPKGEPQLRKH FLMALPQLMKDLNEGLELIRWPEPAKKDFFGKLLPEHAASLKTAPPTDFEQRQLKHYLDQVEKVSIPTADELAPSAHAEL PPPQEHAAPLTFSAEEAEKIGLVDENAVDWDGQVDIDLGEGGPSAEAEAGEVDVVLEALAPEPAEPTHGPQLIHHLQTGI AYRMHVEGRWQRVRLNWISPGRAFFVFTHGKAHQKTISMTSRMLTRMCDTERFRAFEQAELIERATARARKQLAQLGGAA PRSTATSSRL >Mature_890_residues MNAAPNVQAALNAACLRIQATVTAAAERLVETLASQSASFASITTRQLMASTQFDLRRKLPDFTLVFSAGLRDRVLEAAE PRSSTRSLATTSWESLSLVGDDEVDERVSAERLSMQIVHECEWEMRELDGYMAALLRHGEPDPDRNPLRPEIIGRALRRA IHAVNDDPASHRLLATEFGRSLATAMRACYAGIIADLQARGVSPIGLTVKTVQGPGNDLPREVLRENSGYQTSGFHGSAF QASARDLVQAEQMLQTLFGIALPQALQAASGAGALGLPSGPGAPSGFGSSRSGSSTGSRGYGGTGSGYGSPGGGSGMPSG GSGGGSGSGAGGRATGPGASSERSSGTAYNNDAQMLDILRRLVVVNATAGETAGLGADPRGGTLPAGSSRPGPLSGVSGP SGITPLAGLMAVNVIRQHRDELMRASSGTLDHMVIDVVGALFDQVLSDSKVPPQMARQIARLQLPVLRAALKDVGFFSSR RHPVRRFVNRIASLAAAYEDLDQGPGKDFIERVRALVQEIVEGDFDQMDLYESKLQAIEALVQEQSARDVGTHATAATLL DNKETQLRIQQRYMRELKSHLEPVALPGFVRDFLAQVWSQVQVQAAGPFGSPELAQRANRAARELALSVQPKGEPQLRKH FLMALPQLMKDLNEGLELIRWPEPAKKDFFGKLLPEHAASLKTAPPTDFEQRQLKHYLDQVEKVSIPTADELAPSAHAEL PPPQEHAAPLTFSAEEAEKIGLVDENAVDWDGQVDIDLGEGGPSAEAEAGEVDVVLEALAPEPAEPTHGPQLIHHLQTGI AYRMHVEGRWQRVRLNWISPGRAFFVFTHGKAHQKTISMTSRMLTRMCDTERFRAFEQAELIERATARARKQLAQLGGAA PRSTATSSRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95397; Mature: 95397
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAPNVQAALNAACLRIQATVTAAAERLVETLASQSASFASITTRQLMASTQFDLRRKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC PDFTLVFSAGLRDRVLEAAEPRSSTRSLATTSWESLSLVGDDEVDERVSAERLSMQIVHE CCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH CEWEMRELDGYMAALLRHGEPDPDRNPLRPEIIGRALRRAIHAVNDDPASHRLLATEFGR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SLATAMRACYAGIIADLQARGVSPIGLTVKTVQGPGNDLPREVLRENSGYQTSGFHGSAF HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCHH QASARDLVQAEQMLQTLFGIALPQALQAASGAGALGLPSGPGAPSGFGSSRSGSSTGSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGGTGSGYGSPGGGSGMPSGGSGGGSGSGAGGRATGPGASSERSSGTAYNNDAQMLDILR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RLVVVNATAGETAGLGADPRGGTLPAGSSRPGPLSGVSGPSGITPLAGLMAVNVIRQHRD HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELMRASSGTLDHMVIDVVGALFDQVLSDSKVPPQMARQIARLQLPVLRAALKDVGFFSSR HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHPVRRFVNRIASLAAAYEDLDQGPGKDFIERVRALVQEIVEGDFDQMDLYESKLQAIEA CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVQEQSARDVGTHATAATLLDNKETQLRIQQRYMRELKSHLEPVALPGFVRDFLAQVWSQ HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VQVQAAGPFGSPELAQRANRAARELALSVQPKGEPQLRKHFLMALPQLMKDLNEGLELIR HEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE WPEPAKKDFFGKLLPEHAASLKTAPPTDFEQRQLKHYLDQVEKVSIPTADELAPSAHAEL CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC PPPQEHAAPLTFSAEEAEKIGLVDENAVDWDGQVDIDLGEGGPSAEAEAGEVDVVLEALA CCCHHHCCCCEECHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHC PEPAEPTHGPQLIHHLQTGIAYRMHVEGRWQRVRLNWISPGRAFFVFTHGKAHQKTISMT CCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHH SRMLTRMCDTERFRAFEQAELIERATARARKQLAQLGGAAPRSTATSSRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNAAPNVQAALNAACLRIQATVTAAAERLVETLASQSASFASITTRQLMASTQFDLRRKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC PDFTLVFSAGLRDRVLEAAEPRSSTRSLATTSWESLSLVGDDEVDERVSAERLSMQIVHE CCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH CEWEMRELDGYMAALLRHGEPDPDRNPLRPEIIGRALRRAIHAVNDDPASHRLLATEFGR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SLATAMRACYAGIIADLQARGVSPIGLTVKTVQGPGNDLPREVLRENSGYQTSGFHGSAF HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCHH QASARDLVQAEQMLQTLFGIALPQALQAASGAGALGLPSGPGAPSGFGSSRSGSSTGSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGGTGSGYGSPGGGSGMPSGGSGGGSGSGAGGRATGPGASSERSSGTAYNNDAQMLDILR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RLVVVNATAGETAGLGADPRGGTLPAGSSRPGPLSGVSGPSGITPLAGLMAVNVIRQHRD HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELMRASSGTLDHMVIDVVGALFDQVLSDSKVPPQMARQIARLQLPVLRAALKDVGFFSSR HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHPVRRFVNRIASLAAAYEDLDQGPGKDFIERVRALVQEIVEGDFDQMDLYESKLQAIEA CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVQEQSARDVGTHATAATLLDNKETQLRIQQRYMRELKSHLEPVALPGFVRDFLAQVWSQ HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VQVQAAGPFGSPELAQRANRAARELALSVQPKGEPQLRKHFLMALPQLMKDLNEGLELIR HEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE WPEPAKKDFFGKLLPEHAASLKTAPPTDFEQRQLKHYLDQVEKVSIPTADELAPSAHAEL CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC PPPQEHAAPLTFSAEEAEKIGLVDENAVDWDGQVDIDLGEGGPSAEAEAGEVDVVLEALA CCCHHHCCCCEECHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHC PEPAEPTHGPQLIHHLQTGIAYRMHVEGRWQRVRLNWISPGRAFFVFTHGKAHQKTISMT CCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHH SRMLTRMCDTERFRAFEQAELIERATARARKQLAQLGGAAPRSTATSSRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA