| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266018
Identifier: 124266018
GI number: 124266018
Start: 866098
End: 866766
Strand: Reverse
Name: 124266018
Synonym: Mpe_A0825
Alternate gene names: NA
Gene position: 866766-866098 (Counterclockwise)
Preceding gene: 124266037
Following gene: 124266017
Centisome position: 21.43
GC content: 66.67
Gene sequence:
>669_bases ATGAGCCCACGGGTCCCGAAGAAAGCACCGCGCCGCACGGCCGAGCGCATCCTGGAGGTGACGCTGGAACTGTTCAACCG CTTCGGCGAGCCCAACGTCAGCACCACGCTGATCTCGGCCGAGCTCAACATCAGCCCCGGCAACCTCTACTACCACTACC CGGCCAAGGACGAGCTGATCAACAGCCTGTTCGACCGCTACGAGGCCGCGCTCACCGAGCTGCTGCGGGCGGCCGACAAC GTGCGCAACGTCGAGGACGCCTGGCTGTTCTTCCACATGCTGTTCGAGCTGATCTGGCAGTACCGCTTCCTGTACCGCGA CCTGAACGACCTGCTCAGCAAGAACCGGCGCCTGGAGACCCACTTCCAGTTCGTGCTGAAGAACAAGCAGCATGCGGTCA AGGCGGTGCTCGACGGCCTGAGCCGCGCGCAGGCGATGCGCATCGACGCGCGCGAGGCCGAGCCGGTGGCCACCTCGATG GTGGTGGTGCTGACCTACTGGCTCAGCTACGAGTACGTGCGCGACCCGCGCAAGGCATTGGAGCCCGAAAGCGCCGGCGC GGCGCTGCTGCGCGGCGCCCAGCACGTGCTCAGCCTGCTGATGCCCTACCTCGATCCGGGCCAGCGCGAGCACCTGCTGA TGCTGGCCGGCAGCTACCAGCGCGACTGA
Upstream 100 bases:
>100_bases GCAGGCCCCGCCATCGGTGCTGGCCGCATTGGTGGCGCGTGATCTTGATGCTAGATTGCCCGCAAACCAGCCCTCTCGCC CGCCGCGAGACGACCGCGCC
Downstream 100 bases:
>100_bases CCGATAAGAACGACCGATTCCCCGGAACGACGCAGGAGACAAGCACCATGGCCAAGTGGACCGCCTTCCCTTACGACAAC GCCGACTACGTGCACGACGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELINSLFDRYEAALTELLRAADN VRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLETHFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSM VVVLTYWLSYEYVRDPRKALEPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD
Sequences:
>Translated_222_residues MSPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELINSLFDRYEAALTELLRAADN VRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLETHFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSM VVVLTYWLSYEYVRDPRKALEPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD >Mature_221_residues SPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELINSLFDRYEAALTELLRAADNV RNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLETHFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSMV VVLTYWLSYEYVRDPRKALEPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25754; Mature: 25623
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELI CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCHHHHH NSLFDRYEAALTELLRAADNVRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLET HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH HFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSMVVVLTYWLSYEYVRDPRKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHC EPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCHHHHH NSLFDRYEAALTELLRAADNVRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLET HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH HFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSMVVVLTYWLSYEYVRDPRKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHC EPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA