Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265999

Identifier: 124265999

GI number: 124265999

Start: 844645

End: 845802

Strand: Direct

Name: 124265999

Synonym: Mpe_A0806

Alternate gene names: NA

Gene position: 844645-845802 (Clockwise)

Preceding gene: 124265998

Following gene: 124266000

Centisome position: 20.89

GC content: 65.54

Gene sequence:

>1158_bases
ATGAACCTACCGAGCCAGCGCCGCGCGCTGCTGAAACTGGCGGCACTGTCGTCCCTCGCGGCGAGCGCGGCGCTGATGGG
TTGCGGCAAGAAGGAGGAGCCGGCCCCGGCACCTGCCCCGGCTGCAGCGCCCGCCGCCGCTCCGGCCGCCGAGCCGCTGA
AGGCCGCGTGGGTCTATGTCGGCCCGGTCGGTGACGCAGGCTGGACCTACGCCCATGACCAGGGCCGCAAGGCGGTCGAG
GCGGAATACGGCGACAAGGTCAAGACGACCTTCGTCGAGAAGGTGCCGGAGGGCGCCGACGCAGAGCGCGTGATCCGCGA
CCTGGCGGTGCAGGGCAACAAGATCATCTTCGCCACCTCGTTCGGCTACATGGAGCCGATGCTGAAGGTGGCAGGCGAGT
TCCCGGACGTGAAGTTCGAGCATGCCACCGGCTACAAGACGGCGCCCAACATGCGCATCTACGATGCCAAGTTCTATGAA
GACGCCTATGTGGCCGGCATCATCGCCGGCACGATGAGCAAGAGCGGCACGATCGGCTTCGTGGGCTCCTTCCCGATCCC
CGAAGTGCTGCGCAACATCAACGCCTACACGCTGGGCGCGCAGAGCGTGAACCCGACGATCAAGACCAAGGTGGTGTGGG
TCAGCACCTGGTTCGACCCGCCGAAGGAAGGCGAGGCCGCGCAGTCGCTGATCAACGGCGGCGCCGACGTGCTGTTGCAG
AACACCGACTCCTCGGCCGTGCTGCAGACGGCCGAGAAGAACGGCAAGTACGCCTTCGGCTGGGACAGCGACATGAGCGC
CTTCGCGCCCAAGGCCCACCTGGCGAGCTGCATCGTCGACTGGGGCGGCTACTACAAGAAGGCCGTCAAGGACGTGATCG
ACGGCAGCTGGAAGACCGAGCGCACCGTTTGGGGCGTCAAGGAAGGTCAGAACGACCTGATCAAGATTGCCGACGTGGTG
CCCGAGGACACCAAGAAGAAGGTCGACGAGGCGAAGGCCGGCATGAAGGCTGGGACCTTCGAGGTCTTCACCGGCCCGAT
CCTTGCCAACGACGGCAAGGAGGTGCTGGCCAAGGGCGTCGCCGCTGACCAGGCATGGAAGGACAAGATCGACTTCTACG
TCAAGGGCGTCGAGGGCAAGATACCGTCGGCCAAGTAG

Upstream 100 bases:

>100_bases
AACATGCCCGCGTCGCTCGGCAAGCCTTTCCATCCCGGTTCGTGACGGGCAGGACGGCCGGTCCCTTTCTTTCTTCATCC
TTCGCCTCACAGGAGTCAAC

Downstream 100 bases:

>100_bases
GCGGCGCGGCCCGCGGTCCCACACCCGCGCCGCAGGTGGCGTCCTGCGCCTGGAGTCTGGAGCGAGGGAGCGCGATGAAC
GACGAGCATCGCTGGTGGTA

Product: putative lipoprotein

Products: NA

Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; Membrane Lipoprotein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic/Surface Lipoprotein; Outer Membrane Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Basic Protein; Tat Pathway Signal Sequence/Basic Membrane Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; ABC-Type Transport Periplasmic Component

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNLPSQRRALLKLAALSSLAASAALMGCGKKEEPAPAPAPAAAPAAAPAAEPLKAAWVYVGPVGDAGWTYAHDQGRKAVE
AEYGDKVKTTFVEKVPEGADAERVIRDLAVQGNKIIFATSFGYMEPMLKVAGEFPDVKFEHATGYKTAPNMRIYDAKFYE
DAYVAGIIAGTMSKSGTIGFVGSFPIPEVLRNINAYTLGAQSVNPTIKTKVVWVSTWFDPPKEGEAAQSLINGGADVLLQ
NTDSSAVLQTAEKNGKYAFGWDSDMSAFAPKAHLASCIVDWGGYYKKAVKDVIDGSWKTERTVWGVKEGQNDLIKIADVV
PEDTKKKVDEAKAGMKAGTFEVFTGPILANDGKEVLAKGVAADQAWKDKIDFYVKGVEGKIPSAK

Sequences:

>Translated_385_residues
MNLPSQRRALLKLAALSSLAASAALMGCGKKEEPAPAPAPAAAPAAAPAAEPLKAAWVYVGPVGDAGWTYAHDQGRKAVE
AEYGDKVKTTFVEKVPEGADAERVIRDLAVQGNKIIFATSFGYMEPMLKVAGEFPDVKFEHATGYKTAPNMRIYDAKFYE
DAYVAGIIAGTMSKSGTIGFVGSFPIPEVLRNINAYTLGAQSVNPTIKTKVVWVSTWFDPPKEGEAAQSLINGGADVLLQ
NTDSSAVLQTAEKNGKYAFGWDSDMSAFAPKAHLASCIVDWGGYYKKAVKDVIDGSWKTERTVWGVKEGQNDLIKIADVV
PEDTKKKVDEAKAGMKAGTFEVFTGPILANDGKEVLAKGVAADQAWKDKIDFYVKGVEGKIPSAK
>Mature_385_residues
MNLPSQRRALLKLAALSSLAASAALMGCGKKEEPAPAPAPAAAPAAAPAAEPLKAAWVYVGPVGDAGWTYAHDQGRKAVE
AEYGDKVKTTFVEKVPEGADAERVIRDLAVQGNKIIFATSFGYMEPMLKVAGEFPDVKFEHATGYKTAPNMRIYDAKFYE
DAYVAGIIAGTMSKSGTIGFVGSFPIPEVLRNINAYTLGAQSVNPTIKTKVVWVSTWFDPPKEGEAAQSLINGGADVLLQ
NTDSSAVLQTAEKNGKYAFGWDSDMSAFAPKAHLASCIVDWGGYYKKAVKDVIDGSWKTERTVWGVKEGQNDLIKIADVV
PEDTKKKVDEAKAGMKAGTFEVFTGPILANDGKEVLAKGVAADQAWKDKIDFYVKGVEGKIPSAK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41119; Mature: 41119

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPSQRRALLKLAALSSLAASAALMGCGKKEEPAPAPAPAAAPAAAPAAEPLKAAWVYV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
GPVGDAGWTYAHDQGRKAVEAEYGDKVKTTFVEKVPEGADAERVIRDLAVQGNKIIFATS
ECCCCCCCCEECCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEC
FGYMEPMLKVAGEFPDVKFEHATGYKTAPNMRIYDAKFYEDAYVAGIIAGTMSKSGTIGF
CHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECHHHCCHHHHHHHHHCCCCCCCEEE
VGSFPIPEVLRNINAYTLGAQSVNPTIKTKVVWVSTWFDPPKEGEAAQSLINGGADVLLQ
EECCCHHHHHHCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEE
NTDSSAVLQTAEKNGKYAFGWDSDMSAFAPKAHLASCIVDWGGYYKKAVKDVIDGSWKTE
CCCCHHHHHHHHCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RTVWGVKEGQNDLIKIADVVPEDTKKKVDEAKAGMKAGTFEVFTGPILANDGKEVLAKGV
CEEECCCCCCCCEEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCEEECCCHHHHHHHH
AADQAWKDKIDFYVKGVEGKIPSAK
HHHHHHHHCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MNLPSQRRALLKLAALSSLAASAALMGCGKKEEPAPAPAPAAAPAAAPAAEPLKAAWVYV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
GPVGDAGWTYAHDQGRKAVEAEYGDKVKTTFVEKVPEGADAERVIRDLAVQGNKIIFATS
ECCCCCCCCEECCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEC
FGYMEPMLKVAGEFPDVKFEHATGYKTAPNMRIYDAKFYEDAYVAGIIAGTMSKSGTIGF
CHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECHHHCCHHHHHHHHHCCCCCCCEEE
VGSFPIPEVLRNINAYTLGAQSVNPTIKTKVVWVSTWFDPPKEGEAAQSLINGGADVLLQ
EECCCHHHHHHCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEE
NTDSSAVLQTAEKNGKYAFGWDSDMSAFAPKAHLASCIVDWGGYYKKAVKDVIDGSWKTE
CCCCHHHHHHHHCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RTVWGVKEGQNDLIKIADVVPEDTKKKVDEAKAGMKAGTFEVFTGPILANDGKEVLAKGV
CEEECCCCCCCCEEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCEEECCCHHHHHHHH
AADQAWKDKIDFYVKGVEGKIPSAK
HHHHHHHHCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA