| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is cbaA [H]
Identifier: 124266000
GI number: 124266000
Start: 845877
End: 846872
Strand: Direct
Name: cbaA [H]
Synonym: Mpe_A0807
Alternate gene names: 124266000
Gene position: 845877-846872 (Clockwise)
Preceding gene: 124265999
Following gene: 124266001
Centisome position: 20.92
GC content: 72.59
Gene sequence:
>996_bases ATGAACGACGAGCATCGCTGGTGGTATCCGGTCGCCACCGCTGCCGACCTGGGCGCCGGCCCGCTGCCGGCGGCGCTGTT CGGTGAGGACCTGGTGCTGTGGCGCGACGAAGCCGGCACGCCGCACGCCTTCACGGATCGCTGCCCGCACCGCGGCACGC GGCTCTCGCTCGGCGCGGTGCGCGTCGTCGACGGCCGGGCGCAGCTCGAGTGTCCGTACCACGGCTGGCGCTTCGACGGC GGCGGGCGCTGTCTGCGCATCCCGGCGCTGCCCGACTTCACGCCGGCGACTGGCCATGCGGCGCGGGCCCATCCGCTGCG CGAGGCGCATGGCCTGCTGTGGGTCGTGCTCGGCGGTGATGCCAACCTGGAGACCGTCGCCACGGCCTGCCTGCCCGACC CGGGGCCGGTACCGGGCCGTGCCGTCGTCTGCGGTCACTACGACGTGGGCACATCGGCGCCGCGGGTGGTGGAGAACTTC CTCGACACCTCGCACTTCGCCTTCGTGCATGAAGGCTGGCTCGGCGACCGCGACCACACCGAAGTGCCGATCTACGACGT GGTGCCCGACGCCAACGGCGCGCCTGGCGTGCCGCACTACCGTGCGTGGCAGCCGCAGGCCAGCGCGCAGTCGGCCGGCG GCGCCTGGGTCGACTACCGCTACCAGGTGCTGTCTCCCTGCAGCGCCTTGCTGGTCAAGCAGGCCGGCGACGACGCGCAG ACGACGCAGGAGGCCTATGCGTTATGGGTTGCGCCGCTGGAACCTGAGCGCAGCCGCGTGTGGTTCACGCTGTTCACCTG CGATACCGCCACGCCCGACGAGACGCTGCGCGCCTTCCAGCACGGCATCTTCACGCAGGACCAGCCGGTGCTCGAATCGC AGCGGCCGCGCCGGCTGCCGCTGAGCGGCAGCGAGGCGCACTGCGCGGCCGATCGCCTGAGCACCGCCTACCGGCGCTAC CTGCAGGCGCAGGGCCACACCTACGGCACCTGCTGA
Upstream 100 bases:
>100_bases AGGGCAAGATACCGTCGGCCAAGTAGGCGGCGCGGCCCGCGGTCCCACACCCGCGCCGCAGGTGGCGTCCTGCGCCTGGA GTCTGGAGCGAGGGAGCGCG
Downstream 100 bases:
>100_bases GGCGAGCGAGACCGCGGGCCGGCGAGCGGCGTGGCGTGCCAAGATGCTCCTCGCGTCGCCGGTGCGCGAGGGCGACGACG AGGTGCGCACGATGAACCAC
Product: vanillate O-demethylase oxygenase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MNDEHRWWYPVATAADLGAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAVRVVDGRAQLECPYHGWRFDG GGRCLRIPALPDFTPATGHAARAHPLREAHGLLWVVLGGDANLETVATACLPDPGPVPGRAVVCGHYDVGTSAPRVVENF LDTSHFAFVHEGWLGDRDHTEVPIYDVVPDANGAPGVPHYRAWQPQASAQSAGGAWVDYRYQVLSPCSALLVKQAGDDAQ TTQEAYALWVAPLEPERSRVWFTLFTCDTATPDETLRAFQHGIFTQDQPVLESQRPRRLPLSGSEAHCAADRLSTAYRRY LQAQGHTYGTC
Sequences:
>Translated_331_residues MNDEHRWWYPVATAADLGAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAVRVVDGRAQLECPYHGWRFDG GGRCLRIPALPDFTPATGHAARAHPLREAHGLLWVVLGGDANLETVATACLPDPGPVPGRAVVCGHYDVGTSAPRVVENF LDTSHFAFVHEGWLGDRDHTEVPIYDVVPDANGAPGVPHYRAWQPQASAQSAGGAWVDYRYQVLSPCSALLVKQAGDDAQ TTQEAYALWVAPLEPERSRVWFTLFTCDTATPDETLRAFQHGIFTQDQPVLESQRPRRLPLSGSEAHCAADRLSTAYRRY LQAQGHTYGTC >Mature_331_residues MNDEHRWWYPVATAADLGAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAVRVVDGRAQLECPYHGWRFDG GGRCLRIPALPDFTPATGHAARAHPLREAHGLLWVVLGGDANLETVATACLPDPGPVPGRAVVCGHYDVGTSAPRVVENF LDTSHFAFVHEGWLGDRDHTEVPIYDVVPDANGAPGVPHYRAWQPQASAQSAGGAWVDYRYQVLSPCSALLVKQAGDDAQ TTQEAYALWVAPLEPERSRVWFTLFTCDTATPDETLRAFQHGIFTQDQPVLESQRPRRLPLSGSEAHCAADRLSTAYRRY LQAQGHTYGTC
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 36235; Mature: 36235
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDEHRWWYPVATAADLGAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAV CCCCCEEEEEECCHHCCCCCCCCHHHHCCEEEEEECCCCCCCCHHCCCCCCCCEEECCEE RVVDGRAQLECPYHGWRFDGGGRCLRIPALPDFTPATGHAARAHPLREAHGLLWVVLGGD EEECCCEEEECCCCCEEECCCCCEEECCCCCCCCCCCCCCHHCCCHHHCCCEEEEEECCC ANLETVATACLPDPGPVPGRAVVCGHYDVGTSAPRVVENFLDTSHFAFVHEGWLGDRDHT CCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCC EVPIYDVVPDANGAPGVPHYRAWQPQASAQSAGGAWVDYRYQVLSPCSALLVKQAGDDAQ CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHH TTQEAYALWVAPLEPERSRVWFTLFTCDTATPDETLRAFQHGIFTQDQPVLESQRPRRLP HHHHEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCC LSGSEAHCAADRLSTAYRRYLQAQGHTYGTC CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNDEHRWWYPVATAADLGAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAV CCCCCEEEEEECCHHCCCCCCCCHHHHCCEEEEEECCCCCCCCHHCCCCCCCCEEECCEE RVVDGRAQLECPYHGWRFDGGGRCLRIPALPDFTPATGHAARAHPLREAHGLLWVVLGGD EEECCCEEEECCCCCEEECCCCCEEECCCCCCCCCCCCCCHHCCCHHHCCCEEEEEECCC ANLETVATACLPDPGPVPGRAVVCGHYDVGTSAPRVVENFLDTSHFAFVHEGWLGDRDHT CCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCC EVPIYDVVPDANGAPGVPHYRAWQPQASAQSAGGAWVDYRYQVLSPCSALLVKQAGDDAQ CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHH TTQEAYALWVAPLEPERSRVWFTLFTCDTATPDETLRAFQHGIFTQDQPVLESQRPRRLP HHHHEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCC LSGSEAHCAADRLSTAYRRYLQAQGHTYGTC CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]