| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is mop [H]
Identifier: 124265991
GI number: 124265991
Start: 833273
End: 835765
Strand: Reverse
Name: mop [H]
Synonym: Mpe_A0798
Alternate gene names: 124265991
Gene position: 835765-833273 (Counterclockwise)
Preceding gene: 124265992
Following gene: 124265990
Centisome position: 20.67
GC content: 72.0
Gene sequence:
>2493_bases TTGGCGGGGGTACCCGATGCGCGTTGCCACTCACCCACCCACCCACGGGGCCCCACCCTCCACCTCGCCGCAGCACCGCC CCGAAGACCCTGGCATGAACAGGAACAGGAGACTCCGGTGAACAAGCAGGCCGACGCCTTCCTCGTCGACAGCAGCACCC AGCCCCCCTCGGAGCAGACCGCCCCCGAGGCCGGCCGCGCGCGACCCCATGAGTCGGCGCACCTGCACGTGGCCGGTGCG GCACCCTACATCGACGACCTGCCCGAGCTGGTCGGCACGCTGCACGCGGCACTGGGCCTGTCGCCGGTGGCGCACGGCGT GCTGAAGGCGATCGACGTCGAGCGGCTGAAGGCCCTGCCCGGCGTCGTGGCGGTGCTGACCGCGGCTGACATCCCCGGGC CCAACGACTGCGGCCCCATCGTGCACGACGAGCCCATCCTCGCCACCGGCCACGTGCACTACCTCGGCCAACCGGTGTTC GCGGTGATCGCCACCGACCGCGAGCGGGCGCGCCGCGCTGCCGCCCAGGCGAAGGCGGTGCTCTCGATCGACCCGCTGCC ACCGGTGCTGAGTGCGCTGGAGGCACACGCGAAGCGGCAGTACGTGCTGCCCGACATGCACCTGGTGCGCGAGTCGGCGC CCGGCGCGCTGCACGCCGCGCTGGCCGCCGCACCGCACCGCCTGCAGGGCACGCTGAGCGTCGGCGGCCAGGAGCAGTTC TACCTGGAAGGCCAGATCTCCTACGCCTGCCCGACCGAGAACGCCGGGCTCAAGGTCCATTGTTCGACCCAGCACCCGAG CGAGATGCAGCATCTGGTGGCGCATGCGCTGGGCTGGCGCTCCAACCAGGTGCAGGTCGAATGCCGGCGCATGGGCGGTG GCTTCGGCGGCAAGGAGTCGCAGTCGGCGGTGTTCGCCTGCGTCGCCTCGGTGGCCGCGGTGAAGCTGCAGCGGCCGGTG AAGCTGCGCGTGGACCGTGACGACGACTTCCTCGTCACCGGCCGCCGGCACGGCTTCGAGTACGCCTGGGAGGTCGGCTG CGACGACGCCGGCCGCGTGCTGGCGGCCGAGGTGACGATGGTGTCGAACGCTGGCTGGAGCGCCGACCTGTCGGGCCCGG TGATGACGCGCGCGCTCTGCCACTTCGACAACGCCTACTGGCTGCCCGAGGTGGCGATGCACGGCCACAGCGCGCGCACC AACACCCAGAGCAACACCGCCTTCCGCGGCTTCGGCGGGCCGCAGGGCGCGATCGCGATCGAGGTCATCCTCGACTCGGT GGCGCGCCGGCTCGGCCTGGACCCGCTGGCGGTTCGGCGCGCCAACTTCTACGGCACGACCTCGAACAACGTCACGCCCT ACGGCCAGCAGGTCGACGACAACGTGATCGCGCCGCTGGTCGACACGCTGGCCGCGAGCAGCGACTACGCCGCGCGCCGC GCGGCCGTCGCCGCCTACAACGCCGCCAGCCCGGTGCTGAAGAAGGGCCTGGCGCTGACACCGGTGAAGTTCGGCATCTC GTTCAACGTGGCGCACTTCAACCAGGCCGGCGCGCTGGTGCACATCTACACCGACGGCTCGGTGCTGGTGAACCACGGCG GCACCGAGATGGGCCAGGGCCTGAACACCAAGGTGGCGCAGGTGGTGGCGCACGAGCTCGGCATCGCCTTCGAGCGCGTG CGCGTGAGCGCCACCGACACCCACAAGGTCGCCAACACCTCGGCCACCGCGGCCTCGACCGGCAGCGACCTGAACGGCAA GGCCGCGCAGGACGCGGCCCGCCAGCTGCGCGAGCGGCTCGCCGCGCTGGCGGCCTCGATGCATGGCGGCATGCCGGAGG CGGTGCGCTTCGCCGACGACCGCGTGCACGTCAATGGCGCGAACCTCGACTTCGACGCGCTGGTGGCGCAGGCCTACGCC GCGCGCGTGCAGCTGTGGAGCGACGGCTTCTACGCCACGCCCGGCCTGCACTGGAACCGCGAGACGCTGCAGGGCCGACC GTTCTACTACTTCGCCTACGGCGCGGCGGTGGCCGAGGTGGTCGTCGATACGCTGAGCGGCGAGCACCGCCTGCTGCGCG CCGACCTGCTGCACGACGTGGGCCGCTCGCTGAATCCGGCGGTCGACATCGGCCAGGTGGAGGGCGCGTTCATCCAGGGC ATGGGCTGGCTGACCTCGGAGGAGCTGGTCTGGCACCCCAAGACCGGCCTGCTGATGACGCACGCGCCCAGCACCTACAA GATCCCGACCGCGAACGACTGCCCGCCGGTCTTCCGCACCGCGCTGTTCGAGAACAACGACAACGTCGAGGACAGCATCC ACCGCAGCAAGGCGGTCGGCGAGCCGCCGCTGCTGCTGCCGTTCTCGGTGTTCCTGGCGATCCGCGACGCGGTCTCGGCG GTCGGCGGCCACCGCGTCGACCCGCCGCTGCGCGCGCCGGCCACGCCCGAGGCGGTGCTCGACGCGATCGACGCGGTGCG TGCGGCACGCTGA
Upstream 100 bases:
>100_bases TTGAGTCGGACCGTACTGCGTCCATGAGCCTTTTTTCGATGCCTGATCCTGTCGTTCCTGTCGGGCGCGCGCGGGGCCAT GGGCGGGTGAGCGTCATCGC
Downstream 100 bases:
>100_bases AGCCACCATGACCCTGCGCACCCACGCCCTCCGCTGGCTCGACGCATCCCGCCCGGCGATCGTCGTCGAGGTGGCTGCCA CGCGCGGCTCGGTGCCCCGC
Product: xanthine oxidase
Products: NA
Alternate protein names: Molybdenum iron sulfur protein [H]
Number of amino acids: Translated: 830; Mature: 829
Protein sequence:
>830_residues MAGVPDARCHSPTHPRGPTLHLAAAPPRRPWHEQEQETPVNKQADAFLVDSSTQPPSEQTAPEAGRARPHESAHLHVAGA APYIDDLPELVGTLHAALGLSPVAHGVLKAIDVERLKALPGVVAVLTAADIPGPNDCGPIVHDEPILATGHVHYLGQPVF AVIATDRERARRAAAQAKAVLSIDPLPPVLSALEAHAKRQYVLPDMHLVRESAPGALHAALAAAPHRLQGTLSVGGQEQF YLEGQISYACPTENAGLKVHCSTQHPSEMQHLVAHALGWRSNQVQVECRRMGGGFGGKESQSAVFACVASVAAVKLQRPV KLRVDRDDDFLVTGRRHGFEYAWEVGCDDAGRVLAAEVTMVSNAGWSADLSGPVMTRALCHFDNAYWLPEVAMHGHSART NTQSNTAFRGFGGPQGAIAIEVILDSVARRLGLDPLAVRRANFYGTTSNNVTPYGQQVDDNVIAPLVDTLAASSDYAARR AAVAAYNAASPVLKKGLALTPVKFGISFNVAHFNQAGALVHIYTDGSVLVNHGGTEMGQGLNTKVAQVVAHELGIAFERV RVSATDTHKVANTSATAASTGSDLNGKAAQDAARQLRERLAALAASMHGGMPEAVRFADDRVHVNGANLDFDALVAQAYA ARVQLWSDGFYATPGLHWNRETLQGRPFYYFAYGAAVAEVVVDTLSGEHRLLRADLLHDVGRSLNPAVDIGQVEGAFIQG MGWLTSEELVWHPKTGLLMTHAPSTYKIPTANDCPPVFRTALFENNDNVEDSIHRSKAVGEPPLLLPFSVFLAIRDAVSA VGGHRVDPPLRAPATPEAVLDAIDAVRAAR
Sequences:
>Translated_830_residues MAGVPDARCHSPTHPRGPTLHLAAAPPRRPWHEQEQETPVNKQADAFLVDSSTQPPSEQTAPEAGRARPHESAHLHVAGA APYIDDLPELVGTLHAALGLSPVAHGVLKAIDVERLKALPGVVAVLTAADIPGPNDCGPIVHDEPILATGHVHYLGQPVF AVIATDRERARRAAAQAKAVLSIDPLPPVLSALEAHAKRQYVLPDMHLVRESAPGALHAALAAAPHRLQGTLSVGGQEQF YLEGQISYACPTENAGLKVHCSTQHPSEMQHLVAHALGWRSNQVQVECRRMGGGFGGKESQSAVFACVASVAAVKLQRPV KLRVDRDDDFLVTGRRHGFEYAWEVGCDDAGRVLAAEVTMVSNAGWSADLSGPVMTRALCHFDNAYWLPEVAMHGHSART NTQSNTAFRGFGGPQGAIAIEVILDSVARRLGLDPLAVRRANFYGTTSNNVTPYGQQVDDNVIAPLVDTLAASSDYAARR AAVAAYNAASPVLKKGLALTPVKFGISFNVAHFNQAGALVHIYTDGSVLVNHGGTEMGQGLNTKVAQVVAHELGIAFERV RVSATDTHKVANTSATAASTGSDLNGKAAQDAARQLRERLAALAASMHGGMPEAVRFADDRVHVNGANLDFDALVAQAYA ARVQLWSDGFYATPGLHWNRETLQGRPFYYFAYGAAVAEVVVDTLSGEHRLLRADLLHDVGRSLNPAVDIGQVEGAFIQG MGWLTSEELVWHPKTGLLMTHAPSTYKIPTANDCPPVFRTALFENNDNVEDSIHRSKAVGEPPLLLPFSVFLAIRDAVSA VGGHRVDPPLRAPATPEAVLDAIDAVRAAR >Mature_829_residues AGVPDARCHSPTHPRGPTLHLAAAPPRRPWHEQEQETPVNKQADAFLVDSSTQPPSEQTAPEAGRARPHESAHLHVAGAA PYIDDLPELVGTLHAALGLSPVAHGVLKAIDVERLKALPGVVAVLTAADIPGPNDCGPIVHDEPILATGHVHYLGQPVFA VIATDRERARRAAAQAKAVLSIDPLPPVLSALEAHAKRQYVLPDMHLVRESAPGALHAALAAAPHRLQGTLSVGGQEQFY LEGQISYACPTENAGLKVHCSTQHPSEMQHLVAHALGWRSNQVQVECRRMGGGFGGKESQSAVFACVASVAAVKLQRPVK LRVDRDDDFLVTGRRHGFEYAWEVGCDDAGRVLAAEVTMVSNAGWSADLSGPVMTRALCHFDNAYWLPEVAMHGHSARTN TQSNTAFRGFGGPQGAIAIEVILDSVARRLGLDPLAVRRANFYGTTSNNVTPYGQQVDDNVIAPLVDTLAASSDYAARRA AVAAYNAASPVLKKGLALTPVKFGISFNVAHFNQAGALVHIYTDGSVLVNHGGTEMGQGLNTKVAQVVAHELGIAFERVR VSATDTHKVANTSATAASTGSDLNGKAAQDAARQLRERLAALAASMHGGMPEAVRFADDRVHVNGANLDFDALVAQAYAA RVQLWSDGFYATPGLHWNRETLQGRPFYYFAYGAAVAEVVVDTLSGEHRLLRADLLHDVGRSLNPAVDIGQVEGAFIQGM GWLTSEELVWHPKTGLLMTHAPSTYKIPTANDCPPVFRTALFENNDNVEDSIHRSKAVGEPPLLLPFSVFLAIRDAVSAV GGHRVDPPLRAPATPEAVLDAIDAVRAAR
Specific function: Presumed To Be A Dehydrogenase, But Possibly An Oxidase. Participates In Limited Purine Salvage (Requires Aspartate) But Does Not Support Aerobic Growth On Purines As The Sole Carbon Source (Purine Catabolism). Deletion Results In Increased Adenine Sensit
COG id: COG4631
COG function: function code F; Xanthine dehydrogenase, molybdopterin-binding subunit B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=775, Percent_Identity=40.9032258064516, Blast_Score=559, Evalue=1e-159, Organism=Homo sapiens, GI71773480, Length=755, Percent_Identity=38.1456953642384, Blast_Score=461, Evalue=1e-129, Organism=Escherichia coli, GI1789230, Length=768, Percent_Identity=27.34375, Blast_Score=188, Evalue=1e-48, Organism=Escherichia coli, GI1789246, Length=752, Percent_Identity=27.1276595744681, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1786478, Length=779, Percent_Identity=25.2888318356868, Blast_Score=115, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17540638, Length=764, Percent_Identity=40.3141361256544, Blast_Score=523, Evalue=1e-148, Organism=Caenorhabditis elegans, GI32566215, Length=731, Percent_Identity=30.3693570451436, Blast_Score=337, Evalue=1e-92, Organism=Caenorhabditis elegans, GI17539860, Length=743, Percent_Identity=31.0901749663526, Blast_Score=321, Evalue=1e-87, Organism=Drosophila melanogaster, GI17737937, Length=783, Percent_Identity=41.1238825031928, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI24647193, Length=775, Percent_Identity=31.2258064516129, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24647199, Length=763, Percent_Identity=31.7169069462647, Blast_Score=321, Evalue=2e-87, Organism=Drosophila melanogaster, GI24647201, Length=784, Percent_Identity=29.9744897959184, Blast_Score=283, Evalue=3e-76, Organism=Drosophila melanogaster, GI24647195, Length=760, Percent_Identity=28.0263157894737, Blast_Score=273, Evalue=5e-73, Organism=Drosophila melanogaster, GI24647197, Length=760, Percent_Identity=28.0263157894737, Blast_Score=272, Evalue=6e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2; PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.7 [H]
Molecular weight: Translated: 88457; Mature: 88325
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVPDARCHSPTHPRGPTLHLAAAPPRRPWHEQEQETPVNKQADAFLVDSSTQPPSEQT CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCC APEAGRARPHESAHLHVAGAAPYIDDLPELVGTLHAALGLSPVAHGVLKAIDVERLKALP CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC GVVAVLTAADIPGPNDCGPIVHDEPILATGHVHYLGQPVFAVIATDRERARRAAAQAKAV CHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCCCEEEEEECCHHHHHHHHHHHCEE LSIDPLPPVLSALEAHAKRQYVLPDMHLVRESAPGALHAALAAAPHRLQGTLSVGGQEQF EEECCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCHHEEEEEECCCCEEE YLEGQISYACPTENAGLKVHCSTQHPSEMQHLVAHALGWRSNQVQVECRRMGGGFGGKES EEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC QSAVFACVASVAAVKLQRPVKLRVDRDDDFLVTGRRHGFEYAWEVGCDDAGRVLAAEVTM HHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEEEE VSNAGWSADLSGPVMTRALCHFDNAYWLPEVAMHGHSARTNTQSNTAFRGFGGPQGAIAI EECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCHH EVILDSVARRLGLDPLAVRRANFYGTTSNNVTPYGQQVDDNVIAPLVDTLAASSDYAARR HHHHHHHHHHHCCCHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH AAVAAYNAASPVLKKGLALTPVKFGISFNVAHFNQAGALVHIYTDGSVLVNHGGTEMGQG HHHHHHCCCCHHHHCCCEECEEEECEEEEEEEECCCCCEEEEEECCEEEEECCCHHHCCC LNTKVAQVVAHELGIAFERVRVSATDTHKVANTSATAASTGSDLNGKAAQDAARQLRERL CCHHHHHHHHHHHHHEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AALAASMHGGMPEAVRFADDRVHVNGANLDFDALVAQAYAARVQLWSDGFYATPGLHWNR HHHHHHHCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHEEECCCEEECCCCCCCH ETLQGRPFYYFAYGAAVAEVVVDTLSGEHRLLRADLLHDVGRSLNPAVDIGQVEGAFIQG HHCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC MGWLTSEELVWHPKTGLLMTHAPSTYKIPTANDCPPVFRTALFENNDNVEDSIHRSKAVG CCCCCCCCEEEECCCCEEEEECCCCEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCC EPPLLLPFSVFLAIRDAVSAVGGHRVDPPLRAPATPEAVLDAIDAVRAAR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AGVPDARCHSPTHPRGPTLHLAAAPPRRPWHEQEQETPVNKQADAFLVDSSTQPPSEQT CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCC APEAGRARPHESAHLHVAGAAPYIDDLPELVGTLHAALGLSPVAHGVLKAIDVERLKALP CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC GVVAVLTAADIPGPNDCGPIVHDEPILATGHVHYLGQPVFAVIATDRERARRAAAQAKAV CHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCCCEEEEEECCHHHHHHHHHHHCEE LSIDPLPPVLSALEAHAKRQYVLPDMHLVRESAPGALHAALAAAPHRLQGTLSVGGQEQF EEECCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCHHEEEEEECCCCEEE YLEGQISYACPTENAGLKVHCSTQHPSEMQHLVAHALGWRSNQVQVECRRMGGGFGGKES EEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC QSAVFACVASVAAVKLQRPVKLRVDRDDDFLVTGRRHGFEYAWEVGCDDAGRVLAAEVTM HHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEEEE VSNAGWSADLSGPVMTRALCHFDNAYWLPEVAMHGHSARTNTQSNTAFRGFGGPQGAIAI EECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCHH EVILDSVARRLGLDPLAVRRANFYGTTSNNVTPYGQQVDDNVIAPLVDTLAASSDYAARR HHHHHHHHHHHCCCHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH AAVAAYNAASPVLKKGLALTPVKFGISFNVAHFNQAGALVHIYTDGSVLVNHGGTEMGQG HHHHHHCCCCHHHHCCCEECEEEECEEEEEEEECCCCCEEEEEECCEEEEECCCHHHCCC LNTKVAQVVAHELGIAFERVRVSATDTHKVANTSATAASTGSDLNGKAAQDAARQLRERL CCHHHHHHHHHHHHHEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AALAASMHGGMPEAVRFADDRVHVNGANLDFDALVAQAYAARVQLWSDGFYATPGLHWNR HHHHHHHCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHEEECCCEEECCCCCCCH ETLQGRPFYYFAYGAAVAEVVVDTLSGEHRLLRADLLHDVGRSLNPAVDIGQVEGAFIQG HHCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC MGWLTSEELVWHPKTGLLMTHAPSTYKIPTANDCPPVFRTALFENNDNVEDSIHRSKAVG CCCCCCCCEEEECCCCEEEEECCCCEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCC EPPLLLPFSVFLAIRDAVSAVGGHRVDPPLRAPATPEAVLDAIDAVRAAR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8143744; 7502041; 8799115; 11713686 [H]