| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yqeB [H]
Identifier: 124265990
GI number: 124265990
Start: 832438
End: 833265
Strand: Reverse
Name: yqeB [H]
Synonym: Mpe_A0797
Alternate gene names: 124265990
Gene position: 833265-832438 (Counterclockwise)
Preceding gene: 124265991
Following gene: 124265988
Centisome position: 20.6
GC content: 74.52
Gene sequence:
>828_bases ATGACCCTGCGCACCCACGCCCTCCGCTGGCTCGACGCATCCCGCCCGGCGATCGTCGTCGAGGTGGCTGCCACGCGCGG CTCGGTGCCCCGCGAGGCCGGCACCCGCATGCTGGTGGCGGCCGACTCGGTGCGCGGCACGATCGGCGGCGGCCACCTCG AATGGCAGGCCATCGCGCAGGCGCGCGAGCGGCTGGCGCGCTGCACGACGCGCGGCGACGAGCCGCCGCGCGAGCAGACG CTCGCGCTCGGCCCCTCGCTCGGCCAGTGCTGCGGTGGCGAGGTCACGCTGCGCTATGCGCCGCTCGACGCGGCGTCGCT GGCGGCCTGGCCCGAGACCGTGCCACGCTTCCATCTGCAGCTCTACGGCGCCGGGCACGTGGGCCGCGCGATCGTGGCGC TGCTGGCCAGCATCGACTGCCGCGTGCAGTGGATCGACGAGCGCGAAGCCGAGTTCGACGCCTTCGCGGCGCTGGCGCCG CTGCCGCCGCACGTGCAGGCGCTGTGCGTCGACGCGGTCGAGGCCGAGGTGTCCCAGGCGCCGCCCGGCGCCTGCTACCT GGTGCTGACCCACGAGCACGACCTCGACCTGCGCATCACCGAAGCCGTACTGCGGCGCGGCGACTTCGCCTACTGCGGGC TGATCGGCTCCCGCACCAAGCGCGCACGCTTCGTGCACCGCTTCCAGGAGCGCGGCGTGTCCGACGCCGCGATCGCCCGC CTGACCTGCCCGATCGGCCTCCCCGGGATCACCGGCAAGGAGCCCGCGGTGCTGGCGATCGCAGCGGTGGCGCAGTTGCT GCAAGCCACGGGATCTGTTGTTGGCTGA
Upstream 100 bases:
>100_bases GTCGGCGGCCACCGCGTCGACCCGCCGCTGCGCGCGCCGGCCACGCCCGAGGCGGTGCTCGACGCGATCGACGCGGTGCG TGCGGCACGCTGAAGCCACC
Downstream 100 bases:
>100_bases GCGCTGCTGACCGGGCCGCCGGGTGAACGCCTGCGTTCGTGTCCCCCGGTGCCGGCCTCATGGCCGTCCCCTCCTCCTCT ACCTCACTCCGCCATTCACC
Product: molybdenum cofactor sulfurylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTLRTHALRWLDASRPAIVVEVAATRGSVPREAGTRMLVAADSVRGTIGGGHLEWQAIAQARERLARCTTRGDEPPREQT LALGPSLGQCCGGEVTLRYAPLDAASLAAWPETVPRFHLQLYGAGHVGRAIVALLASIDCRVQWIDEREAEFDAFAALAP LPPHVQALCVDAVEAEVSQAPPGACYLVLTHEHDLDLRITEAVLRRGDFAYCGLIGSRTKRARFVHRFQERGVSDAAIAR LTCPIGLPGITGKEPAVLAIAAVAQLLQATGSVVG
Sequences:
>Translated_275_residues MTLRTHALRWLDASRPAIVVEVAATRGSVPREAGTRMLVAADSVRGTIGGGHLEWQAIAQARERLARCTTRGDEPPREQT LALGPSLGQCCGGEVTLRYAPLDAASLAAWPETVPRFHLQLYGAGHVGRAIVALLASIDCRVQWIDEREAEFDAFAALAP LPPHVQALCVDAVEAEVSQAPPGACYLVLTHEHDLDLRITEAVLRRGDFAYCGLIGSRTKRARFVHRFQERGVSDAAIAR LTCPIGLPGITGKEPAVLAIAAVAQLLQATGSVVG >Mature_274_residues TLRTHALRWLDASRPAIVVEVAATRGSVPREAGTRMLVAADSVRGTIGGGHLEWQAIAQARERLARCTTRGDEPPREQTL ALGPSLGQCCGGEVTLRYAPLDAASLAAWPETVPRFHLQLYGAGHVGRAIVALLASIDCRVQWIDEREAEFDAFAALAPL PPHVQALCVDAVEAEVSQAPPGACYLVLTHEHDLDLRITEAVLRRGDFAYCGLIGSRTKRARFVHRFQERGVSDAAIARL TCPIGLPGITGKEPAVLAIAAVAQLLQATGSVVG
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789240, Length=283, Percent_Identity=29.6819787985866, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR017695 - InterPro: IPR003777 [H]
Pfam domain/function: PF02625 XdhC_CoxI [H]
EC number: NA
Molecular weight: Translated: 29358; Mature: 29227
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRTHALRWLDASRPAIVVEVAATRGSVPREAGTRMLVAADSVRGTIGGGHLEWQAIAQ CCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHH ARERLARCTTRGDEPPREQTLALGPSLGQCCGGEVTLRYAPLDAASLAAWPETVPRFHLQ HHHHHHHHHCCCCCCCCHHEEEECCCHHHHCCCCEEEEECCCCHHHHHCCHHHCCCEEEE LYGAGHVGRAIVALLASIDCRVQWIDEREAEFDAFAALAPLPPHVQALCVDAVEAEVSQA EECCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC PPGACYLVLTHEHDLDLRITEAVLRRGDFAYCGLIGSRTKRARFVHRFQERGVSDAAIAR CCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCCCHHHHHE LTCPIGLPGITGKEPAVLAIAAVAQLLQATGSVVG EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLRTHALRWLDASRPAIVVEVAATRGSVPREAGTRMLVAADSVRGTIGGGHLEWQAIAQ CCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHH ARERLARCTTRGDEPPREQTLALGPSLGQCCGGEVTLRYAPLDAASLAAWPETVPRFHLQ HHHHHHHHHCCCCCCCCHHEEEECCCHHHHCCCCEEEEECCCCHHHHHCCHHHCCCEEEE LYGAGHVGRAIVALLASIDCRVQWIDEREAEFDAFAALAPLPPHVQALCVDAVEAEVSQA EECCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC PPGACYLVLTHEHDLDLRITEAVLRRGDFAYCGLIGSRTKRARFVHRFQERGVSDAAIAR CCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCCCHHHHHE LTCPIGLPGITGKEPAVLAIAAVAQLLQATGSVVG EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]