Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265973

Identifier: 124265973

GI number: 124265973

Start: 814443

End: 815642

Strand: Direct

Name: 124265973

Synonym: Mpe_A0780

Alternate gene names: NA

Gene position: 814443-815642 (Clockwise)

Preceding gene: 124265972

Following gene: 124265974

Centisome position: 20.14

GC content: 68.08

Gene sequence:

>1200_bases
ATGGACGCCTACCTGCTCGACTGGGCCAACCTGCTGCTGCGCTGGCTGCACGTGGTCACCGCGGTCGCCTGGATCGGTGC
CTCGCTGCACTTCGTGCTGCTCGACGACAGTCTCTACAAGCCGGAGGACCCGGAGCTGAAGAAGAAGGGCGTCGACGGCG
AGGCCTGGGCGGTGCACGGCGGCGGCTTCTATCACTCGAACAAGTACCTGGTGGCGCCGCCCGACCTGCCCGAGAAGCTG
CACTGGTCGTACTGGGAGAGCTACGCGACCTGGCTGTCGGGCTTTGCGCTGCTGTGCGTGCTGTACTTCGTGAACGCCTC
GTCCTTCCTGGTCGACAAGGCGGTGTTCGATTGGTCGCCCGGCGCCGCGGTGGCCGGTGCTCTGGCCTATCTGGTGCTGG
GCTGGGTGGTCTACGACGGCATCTGCCGCGTGTTCGGCCGCAAGCCCGACGGTTCGGTGGGTGGCGACCTGAAGGTGGGC
ATCGGCGTGTTCGTCTACACCTGCGTGGCGGCGTGGATCGCCTGCCACCTGTTCGCTGGCCGCGCCGCCTTCCTGCTGAC
CGGCGCGATGCTGGCCACGGTGATGAGCGCCAACGTGCTGATGGTCATCATCCCCGGCCAGCGCAAGGTGGTGGCGGCGT
TGCGCGCGAAGCTGCCGGTCGACCCGAACCTCGGCAAGCGGGGCAAGCAGCGCAGCGTGCACAACACCTACTTCACGATG
CCGGTGCTGATCGCGATGCTGTCCAACCACTACGGCATGGTCACGCAGCACCGCCTCAACTGGCTGGTGCTGGTGCTGAT
GATGCTGGCTGGTGCGCTGATCCGGCTGTTCTTCGTGCTCCGTCACAAGGCGCCGCCGCGCTGGGAGATCGCCGCCGCGG
CGATCGCGATCCTGGCCTGCGTGGCGTGGCTGGTCGCGCCGAAGCACGAGCCCGTGGCGTCGGCGCAGGCGGCGGCGCCG
GTGAGCTTCGCGCAGGTGCAGGCGGTGGTGGGCGAGCGCTGCGCGATGTGCCACAACGCCCAGGTCGTCAGCAAGAACAT
CCAGCTGCACACGCCCGAGCTGATCGCCGGCCATGCGCAGCAGATCTACCAGCAGGCGGTGGTGCTGAAGACCATGCCGA
TGAACAACGCCACCCAGATGACCGACGCCGAGCGTGCGCTGCTGGGTCGTTGGTACGAGGCCGGCGCGCCGCCCCGTTAG

Upstream 100 bases:

>100_bases
CTGGACTTCGGCCTGGCCGACCCGGCGCTGCACTACCACGTGCCGCTGCTGGTCAGCCCCTGGGCCTATTCCACCTACCG
CGGCAGCTGAGCCGACGCCG

Downstream 100 bases:

>100_bases
CGGGCAAGGCCTGGGTACGGGCCTTGCAAGGACCCGAGGGCATTCGAGGAGAACGCCATGGCTTCGGGCACACCCCCCAC
CGTCCACCCGGTCGACGAGA

Product: putative transmembrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHGGGFYHSNKYLVAPPDLPEKL
HWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSPGAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVG
IGVFVYTCVAAWIACHLFAGRAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM
PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILACVAWLVAPKHEPVASAQAAAP
VSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQQIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR

Sequences:

>Translated_399_residues
MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHGGGFYHSNKYLVAPPDLPEKL
HWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSPGAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVG
IGVFVYTCVAAWIACHLFAGRAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM
PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILACVAWLVAPKHEPVASAQAAAP
VSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQQIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR
>Mature_399_residues
MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHGGGFYHSNKYLVAPPDLPEKL
HWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSPGAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVG
IGVFVYTCVAAWIACHLFAGRAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM
PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILACVAWLVAPKHEPVASAQAAAP
VSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQQIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR

Specific function: Unknown

COG id: COG3748

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43709; Mature: 43709

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEC
GGFYHSNKYLVAPPDLPEKLHWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSP
CCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVGIGVFVYTCVAAWIACHLFAG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM
HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILAC
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VAWLVAPKHEPVASAQAAAPVSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQ
HHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCHHHHHHHHH
QIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEC
GGFYHSNKYLVAPPDLPEKLHWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSP
CCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVGIGVFVYTCVAAWIACHLFAG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM
HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILAC
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VAWLVAPKHEPVASAQAAAPVSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQ
HHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCHHHHHHHHH
QIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA