| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yufQ [H]
Identifier: 124265960
GI number: 124265960
Start: 799774
End: 800691
Strand: Reverse
Name: yufQ [H]
Synonym: Mpe_A0767
Alternate gene names: 124265960
Gene position: 800691-799774 (Counterclockwise)
Preceding gene: 124265961
Following gene: 124265959
Centisome position: 19.8
GC content: 73.53
Gene sequence:
>918_bases ATGAGCGACACCCTGATCGCCTTCTCCGCCGCCATCCTCGGCGGCGCCTTGCGCGTCGGCGTGCCCTTCCTGTTCGTGAG CCTCGGCGAGTGCCTCACCGAGAAGGCCGGCCGCATCAACCTCGGCCTCGAGGGCGTGCTGGTGCTGTCGGCGATGGCGG CCTTCGGTGGCGCCTACCTCAGCGGCTCGGTGTGGGTCGGCGTGCTGGTCGCGGCCGGCGCCGGCGCGCTGCTGGCGCTG CTGCACGGCCTGCTGTGCACGCTGCCGCGCGTGAACGACGTGGCCACCGGCATCGCGCTGATGCTGCTCGGCACCGGCCT GGCCTTCTACCTCGGCAAGCCGCTGATCCAGCCGCAGGCACCGCAGCTCACGCCCATCGCGCTGGGCGGCTGGAGCGAGT CGAGCGTGGTGCAGGCCGCGCTGCAGATCAACCCGCTGCTGCCGCTGGGCATCGTGCTCGCGGTCTTGCTGTGGCTGGGC TTCGCACGCACCCGCTGGGGCCTGCTGGTGCGGCTGGCCGGCGACTCGGCCAACGCGACGCGCGCGCTCGGCTACTCGGT CGGCGCGATCCGCATCGCCGCCACCGCGGCCGGCGGCGCGATCGCCGGGCTGGGCGGGGCCTCGCTGACGCTGTTCTACC CCGGCAGCTGGAACGAGGGCATCTCCTCGGGCCAGGGCCTGATCGCGGTGGCGCTGGTGATCTTCGCGCGCTGGAGTCCG CTGCGCTGCGTGGGCGCGGCGCTGCTGTTCGGCGGCGCGGGCGCCATCGGCCCGGCGCTGCAGTCGATCGGCATCAGCCA GGGCTACTACCTGTTCAGCGCCGTGCCCTATGTGCTCACGCTGGTGATCCTGGTGCTGAGCTGCCGGCCCGGCAGCGTGG CGCAGGGCAGTCCGGGCGAGCTGTCGTCCGCGCGCTGA
Upstream 100 bases:
>100_bases GGGCCGGCGGCGCCGGTGCAGTTGAAGGTCGAGGGCGGGGGAACGTGATGATGACCATGACGAGGAAGCAGCGGGCGATC GAGCACACGGGAGCCACGTC
Downstream 100 bases:
>100_bases GAGAAGGAGACCGCGATGCCCAACGAATCCTTCGTCCATGCCGAGCCCTACCCCTGGCCCTACGACGGCGACCTGCGCCC CGACAACACCGCGCTGATCG
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYLSGSVWVGVLVAAGAGALLAL LHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQAPQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLG FARTRWGLLVRLAGDSANATRALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGELSSAR
Sequences:
>Translated_305_residues MSDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYLSGSVWVGVLVAAGAGALLAL LHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQAPQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLG FARTRWGLLVRLAGDSANATRALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGELSSAR >Mature_304_residues SDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYLSGSVWVGVLVAAGAGALLALL HGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQAPQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLGF ARTRWGLLVRLAGDSANATRALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSPL RCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGELSSAR
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30692; Mature: 30560
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCHHH SGSVWVGVLVAAGAGALLALLHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQA CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLGFARTRWGLLVRLAGDSANAT CCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCH RALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP HHHHCCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCH LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGE HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LSSAR CCCCC >Mature Secondary Structure SDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCHHH SGSVWVGVLVAAGAGALLALLHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQA CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLGFARTRWGLLVRLAGDSANAT CCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCH RALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP HHHHCCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCH LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGE HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LSSAR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]