Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yufQ [H]

Identifier: 124265960

GI number: 124265960

Start: 799774

End: 800691

Strand: Reverse

Name: yufQ [H]

Synonym: Mpe_A0767

Alternate gene names: 124265960

Gene position: 800691-799774 (Counterclockwise)

Preceding gene: 124265961

Following gene: 124265959

Centisome position: 19.8

GC content: 73.53

Gene sequence:

>918_bases
ATGAGCGACACCCTGATCGCCTTCTCCGCCGCCATCCTCGGCGGCGCCTTGCGCGTCGGCGTGCCCTTCCTGTTCGTGAG
CCTCGGCGAGTGCCTCACCGAGAAGGCCGGCCGCATCAACCTCGGCCTCGAGGGCGTGCTGGTGCTGTCGGCGATGGCGG
CCTTCGGTGGCGCCTACCTCAGCGGCTCGGTGTGGGTCGGCGTGCTGGTCGCGGCCGGCGCCGGCGCGCTGCTGGCGCTG
CTGCACGGCCTGCTGTGCACGCTGCCGCGCGTGAACGACGTGGCCACCGGCATCGCGCTGATGCTGCTCGGCACCGGCCT
GGCCTTCTACCTCGGCAAGCCGCTGATCCAGCCGCAGGCACCGCAGCTCACGCCCATCGCGCTGGGCGGCTGGAGCGAGT
CGAGCGTGGTGCAGGCCGCGCTGCAGATCAACCCGCTGCTGCCGCTGGGCATCGTGCTCGCGGTCTTGCTGTGGCTGGGC
TTCGCACGCACCCGCTGGGGCCTGCTGGTGCGGCTGGCCGGCGACTCGGCCAACGCGACGCGCGCGCTCGGCTACTCGGT
CGGCGCGATCCGCATCGCCGCCACCGCGGCCGGCGGCGCGATCGCCGGGCTGGGCGGGGCCTCGCTGACGCTGTTCTACC
CCGGCAGCTGGAACGAGGGCATCTCCTCGGGCCAGGGCCTGATCGCGGTGGCGCTGGTGATCTTCGCGCGCTGGAGTCCG
CTGCGCTGCGTGGGCGCGGCGCTGCTGTTCGGCGGCGCGGGCGCCATCGGCCCGGCGCTGCAGTCGATCGGCATCAGCCA
GGGCTACTACCTGTTCAGCGCCGTGCCCTATGTGCTCACGCTGGTGATCCTGGTGCTGAGCTGCCGGCCCGGCAGCGTGG
CGCAGGGCAGTCCGGGCGAGCTGTCGTCCGCGCGCTGA

Upstream 100 bases:

>100_bases
GGGCCGGCGGCGCCGGTGCAGTTGAAGGTCGAGGGCGGGGGAACGTGATGATGACCATGACGAGGAAGCAGCGGGCGATC
GAGCACACGGGAGCCACGTC

Downstream 100 bases:

>100_bases
GAGAAGGAGACCGCGATGCCCAACGAATCCTTCGTCCATGCCGAGCCCTACCCCTGGCCCTACGACGGCGACCTGCGCCC
CGACAACACCGCGCTGATCG

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYLSGSVWVGVLVAAGAGALLAL
LHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQAPQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLG
FARTRWGLLVRLAGDSANATRALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP
LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGELSSAR

Sequences:

>Translated_305_residues
MSDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYLSGSVWVGVLVAAGAGALLAL
LHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQAPQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLG
FARTRWGLLVRLAGDSANATRALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP
LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGELSSAR
>Mature_304_residues
SDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYLSGSVWVGVLVAAGAGALLALL
HGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQAPQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLGF
ARTRWGLLVRLAGDSANATRALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSPL
RCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGELSSAR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30692; Mature: 30560

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCHHH
SGSVWVGVLVAAGAGALLALLHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQA
CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLGFARTRWGLLVRLAGDSANAT
CCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCH
RALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP
HHHHCCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCH
LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGE
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LSSAR
CCCCC
>Mature Secondary Structure 
SDTLIAFSAAILGGALRVGVPFLFVSLGECLTEKAGRINLGLEGVLVLSAMAAFGGAYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCHHH
SGSVWVGVLVAAGAGALLALLHGLLCTLPRVNDVATGIALMLLGTGLAFYLGKPLIQPQA
CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PQLTPIALGGWSESSVVQAALQINPLLPLGIVLAVLLWLGFARTRWGLLVRLAGDSANAT
CCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCH
RALGYSVGAIRIAATAAGGAIAGLGGASLTLFYPGSWNEGISSGQGLIAVALVIFARWSP
HHHHCCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCH
LRCVGAALLFGGAGAIGPALQSIGISQGYYLFSAVPYVLTLVILVLSCRPGSVAQGSPGE
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LSSAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]