| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is rutB [H]
Identifier: 124265959
GI number: 124265959
Start: 799063
End: 799758
Strand: Reverse
Name: rutB [H]
Synonym: Mpe_A0766
Alternate gene names: 124265959
Gene position: 799758-799063 (Counterclockwise)
Preceding gene: 124265960
Following gene: 124265958
Centisome position: 19.78
GC content: 70.4
Gene sequence:
>696_bases ATGCCCAACGAATCCTTCGTCCATGCCGAGCCCTACCCCTGGCCCTACGACGGCGACCTGCGCCCCGACAACACCGCGCT GATCGTCATCGACATGCAGACCGACTTCTGCGGTGTCGGCGGCTACGTCGACAAGATGGGCTACGACCTGGCGCTGACGC GCGCCCCCATCGAGCCGATCAAGCGGCTGATGGCGCGCCTGCGCACGCTGGGCTTCCACATCATCCACACCCGCGAGGGC CACCGCCCCGACCTCGCCGACCTGCCGGCCAACAAGCGCTGGCGCTCGCGCCGTGCCGGCACCGGCGGCGTCGGCATCGG CGACGTCGGCCCCTGCGGCCGCATCCTGGTGCGCGGCGAGCCGGGCTGGGAGATCATCCCCGAGCTGGCACCACTGCCCG GCGAGCCGGTGATCGACAAGCCGGGCAAGGGCTCGTTCTACGCCACCGACCTCGACATGCTGCTGCGCGTGCGCGGCATC CGCAACCTGCTGCTGGCCGGCATCACCACCGACGTGTGCGTGCACACGACGATGCGCGACGCCAACGACCGCGGCTACGA ATGCCTGCTGCTGTCGGACTGCACCGCGGCCACCGACCACGGCAACCACCTCGCGGCGCTGCACATGGTCAAGATGCAGG GTGGCGTGTTCGGCGCGGTGGCCTCGTCCACCGCGGTGCTGGAGGCACTGGCATGA
Upstream 100 bases:
>100_bases GCTCACGCTGGTGATCCTGGTGCTGAGCTGCCGGCCCGGCAGCGTGGCGCAGGGCAGTCCGGGCGAGCTGTCGTCCGCGC GCTGAGAGAAGGAGACCGCG
Downstream 100 bases:
>100_bases CCGCCCCGCTCGATCCCCGACCGCCGACCGAGGGCGCACTCGCGCTCGACACCTTCGAGCTCACCAAGCGCTTCGGCAGC TTCACCGCGCTGGACGGCGT
Product: isochorismatase family protein
Products: NA
Alternate protein names: Ureidoacrylate amidohydrolase [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPIKRLMARLRTLGFHIIHTREG HRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGEPGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGI RNLLLAGITTDVCVHTTMRDANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA
Sequences:
>Translated_231_residues MPNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPIKRLMARLRTLGFHIIHTREG HRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGEPGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGI RNLLLAGITTDVCVHTTMRDANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA >Mature_230_residues PNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPIKRLMARLRTLGFHIIHTREGH RPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGEPGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGIR NLLLAGITTDVCVHTTMRDANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA
Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family. RutB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081820, Length=224, Percent_Identity=31.6964285714286, Blast_Score=104, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019916 - InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 25093; Mature: 24962
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPI CCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCHHHH KRLMARLRTLGFHIIHTREGHRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGE HHHHHHHHHHCEEEEECCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECC PGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGIRNLLLAGITTDVCVHTTMRD CCCEECHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHEEHHHCC ANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA CCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure PNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPI CCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCHHHH KRLMARLRTLGFHIIHTREGHRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGE HHHHHHHHHHCEEEEECCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECC PGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGIRNLLLAGITTDVCVHTTMRD CCCEECHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHEEHHHCC ANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA CCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA