Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is rutB [H]

Identifier: 124265959

GI number: 124265959

Start: 799063

End: 799758

Strand: Reverse

Name: rutB [H]

Synonym: Mpe_A0766

Alternate gene names: 124265959

Gene position: 799758-799063 (Counterclockwise)

Preceding gene: 124265960

Following gene: 124265958

Centisome position: 19.78

GC content: 70.4

Gene sequence:

>696_bases
ATGCCCAACGAATCCTTCGTCCATGCCGAGCCCTACCCCTGGCCCTACGACGGCGACCTGCGCCCCGACAACACCGCGCT
GATCGTCATCGACATGCAGACCGACTTCTGCGGTGTCGGCGGCTACGTCGACAAGATGGGCTACGACCTGGCGCTGACGC
GCGCCCCCATCGAGCCGATCAAGCGGCTGATGGCGCGCCTGCGCACGCTGGGCTTCCACATCATCCACACCCGCGAGGGC
CACCGCCCCGACCTCGCCGACCTGCCGGCCAACAAGCGCTGGCGCTCGCGCCGTGCCGGCACCGGCGGCGTCGGCATCGG
CGACGTCGGCCCCTGCGGCCGCATCCTGGTGCGCGGCGAGCCGGGCTGGGAGATCATCCCCGAGCTGGCACCACTGCCCG
GCGAGCCGGTGATCGACAAGCCGGGCAAGGGCTCGTTCTACGCCACCGACCTCGACATGCTGCTGCGCGTGCGCGGCATC
CGCAACCTGCTGCTGGCCGGCATCACCACCGACGTGTGCGTGCACACGACGATGCGCGACGCCAACGACCGCGGCTACGA
ATGCCTGCTGCTGTCGGACTGCACCGCGGCCACCGACCACGGCAACCACCTCGCGGCGCTGCACATGGTCAAGATGCAGG
GTGGCGTGTTCGGCGCGGTGGCCTCGTCCACCGCGGTGCTGGAGGCACTGGCATGA

Upstream 100 bases:

>100_bases
GCTCACGCTGGTGATCCTGGTGCTGAGCTGCCGGCCCGGCAGCGTGGCGCAGGGCAGTCCGGGCGAGCTGTCGTCCGCGC
GCTGAGAGAAGGAGACCGCG

Downstream 100 bases:

>100_bases
CCGCCCCGCTCGATCCCCGACCGCCGACCGAGGGCGCACTCGCGCTCGACACCTTCGAGCTCACCAAGCGCTTCGGCAGC
TTCACCGCGCTGGACGGCGT

Product: isochorismatase family protein

Products: NA

Alternate protein names: Ureidoacrylate amidohydrolase [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MPNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPIKRLMARLRTLGFHIIHTREG
HRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGEPGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGI
RNLLLAGITTDVCVHTTMRDANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA

Sequences:

>Translated_231_residues
MPNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPIKRLMARLRTLGFHIIHTREG
HRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGEPGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGI
RNLLLAGITTDVCVHTTMRDANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA
>Mature_230_residues
PNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPIKRLMARLRTLGFHIIHTREGH
RPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGEPGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGIR
NLLLAGITTDVCVHTTMRDANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA

Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family. RutB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081820, Length=224, Percent_Identity=31.6964285714286, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019916
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25093; Mature: 24962

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPI
CCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCHHHH
KRLMARLRTLGFHIIHTREGHRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGE
HHHHHHHHHHCEEEEECCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECC
PGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGIRNLLLAGITTDVCVHTTMRD
CCCEECHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHEEHHHCC
ANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA
CCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
PNESFVHAEPYPWPYDGDLRPDNTALIVIDMQTDFCGVGGYVDKMGYDLALTRAPIEPI
CCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCHHHH
KRLMARLRTLGFHIIHTREGHRPDLADLPANKRWRSRRAGTGGVGIGDVGPCGRILVRGE
HHHHHHHHHHCEEEEECCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECC
PGWEIIPELAPLPGEPVIDKPGKGSFYATDLDMLLRVRGIRNLLLAGITTDVCVHTTMRD
CCCEECHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHEEHHHCC
ANDRGYECLLLSDCTAATDHGNHLAALHMVKMQGGVFGAVASSTAVLEALA
CCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA