Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265954

Identifier: 124265954

GI number: 124265954

Start: 791174

End: 792559

Strand: Reverse

Name: 124265954

Synonym: Mpe_A0761

Alternate gene names: NA

Gene position: 792559-791174 (Counterclockwise)

Preceding gene: 124265955

Following gene: 124265953

Centisome position: 19.6

GC content: 67.39

Gene sequence:

>1386_bases
ATGGCGCACTTTCGACCCCTCGTCATCGCGCTCGCTGCAGCGCCTCTGCTTGCAGTGATGCCTGCCACGGCGCATTCGCC
TCAGGCGCCTGCCGCGCCGGTGGCGGTGGACGCCAAGGCGGCACCTGCCGAGGTCCTCTTCCGCAATGTTCGGGTCTTCG
ACGGCAAGACGGCCCGGTTGACGGCCCCGTCCAATGTGCTGGTCAAGGGCAACAGCATCGCGGCGATCGGCGAAGCTGCT
GCGTCCTCCACCGCCACCGTGATCGACGGGGGAGGCCGCACGCTGATGCCCGGCCTGATCGATGCGCACTGGCACTCCAT
GATGGCGGCGATCCCGCTGAAGGACGGGTTGTCGGCACACCCGGGGTTCATCAACATCGTGGCGGCGGGAGCGGCCAAAG
ACACGCTGATGCGCGGCTTCACCAGCGTGCGGGATCTCGCGGGTCCCGCCTGGGGCTTGAAGCGCGCCATCGACGAGGGC
GTGACGCCGGGCCCGCGCATCTGGCCTTCGGGCGCGATGATCTCGCAGACCAGCGGCCATGCGGACTATCGCGCGTTCAG
CGACCTGCCGCGCTCTCCATCGTCGCCACCGCATTCAACCGAGGTGATGGGTGCGGCGCGCATCGCCGACGGACCGGACG
AGGTACGCCGCGCCGTGCGCGAGCAGTTGATGATGGGCGCCAGCCAGATCAAGCTGGCGGCCGGCGGCGGGGTGTCCTCC
AATTTCGATCCCCTGGATGTGGCGCAATACGGCGAGGAAGAGTTCCGTGCCGCCGTGGAATCGGCGGAGAACTGGGGCAC
CTACGTCGGCGTGCATGCATACACGCCGCGTGCGATCCAAGCGGCGATCAAGGCCGGTGTCCGCGTCATCGACCATGGCC
AGCTGATGGACGATGCCTCCGCCAAGCTCATGGCAGAGAAGGGCGTGTGGTTGTCCATGCAGCCCTTCCTCGACGACGAG
GACGCGAACCCTTTCCCGGAAGGTTCGGCGAACCGGGAGAAGCAGCTGGAGATGACCCGCGGGACCGACTCGGCCTATGC
GCTGGCCAAGAAGTACCGGCTGAAGACGGCCTGGGGCACCGACACGCTGTTCGACGCCAAGCTGGCGGCGCGGCAGGGTG
CGCAACTGGCGAAGATGGTGCGTTGGTACACGCCGGGCGAGGTGCTGGTGATGGCGACGGGCACCAACGCCGAACTGCTG
GCGCTGTCGGGCAAGCGCGCCCCCTACAAGGGCCGCCTCGGCGTGGTGGAAGTGGGTGCGCTCGCCGACCTGCTGCTCGT
CGATGGCGATCCGATGGCCGACATCAATCTCCTTGCCGATCCGGAACGGCGACTGCTGGTCATCATGAAAGACGGCAAGC
TGTACAAGAACCGCCTGACCCACTGA

Upstream 100 bases:

>100_bases
GGCGACGCGATCTTCGAGTAACCTGAGCGAATGGTTCGTCCTTGACGCCGTTCGAGCGCGACAAGGCCTGCGACTGGCAG
CGGACAGGGAGAGCAGTTTG

Downstream 100 bases:

>100_bases
ACAAGGGGCTTGGCGGCGGGCTCCAGCACCCGCCACCGCTTCGCCGATGGTTTCCGGTGCAGCCCCGAGCACACATCCGA
GGAGTCAGCGTGACCGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Xaa-Pro Dipeptidase; Prolidase; Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Family; Secreted Hydrolase; Xaa-Pro Dipeptidase Family; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Pro-Hyp Dipeptidase; Metal-Dependent Amidohydrolase; Amidohydrolase Imidazolonepropionase; Aryldialkylphosphatase; Metallo-Dependent Hydrolase; Amidase; Amidohydrolase Domain Protein; Metal-Dependent Hydrolase; Exported Adenine Deaminase-Like Amidohydrolase; Dipeptidase; M38 Familypeptidase; Xaa-Arg/Lys Peptidase; Hydrolase; Amidohydrolase Domain-Containing Protein; X-Pro Dipeptidase

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAHFRPLVIALAAAPLLAVMPATAHSPQAPAAPVAVDAKAAPAEVLFRNVRVFDGKTARLTAPSNVLVKGNSIAAIGEAA
ASSTATVIDGGGRTLMPGLIDAHWHSMMAAIPLKDGLSAHPGFINIVAAGAAKDTLMRGFTSVRDLAGPAWGLKRAIDEG
VTPGPRIWPSGAMISQTSGHADYRAFSDLPRSPSSPPHSTEVMGAARIADGPDEVRRAVREQLMMGASQIKLAAGGGVSS
NFDPLDVAQYGEEEFRAAVESAENWGTYVGVHAYTPRAIQAAIKAGVRVIDHGQLMDDASAKLMAEKGVWLSMQPFLDDE
DANPFPEGSANREKQLEMTRGTDSAYALAKKYRLKTAWGTDTLFDAKLAARQGAQLAKMVRWYTPGEVLVMATGTNAELL
ALSGKRAPYKGRLGVVEVGALADLLLVDGDPMADINLLADPERRLLVIMKDGKLYKNRLTH

Sequences:

>Translated_461_residues
MAHFRPLVIALAAAPLLAVMPATAHSPQAPAAPVAVDAKAAPAEVLFRNVRVFDGKTARLTAPSNVLVKGNSIAAIGEAA
ASSTATVIDGGGRTLMPGLIDAHWHSMMAAIPLKDGLSAHPGFINIVAAGAAKDTLMRGFTSVRDLAGPAWGLKRAIDEG
VTPGPRIWPSGAMISQTSGHADYRAFSDLPRSPSSPPHSTEVMGAARIADGPDEVRRAVREQLMMGASQIKLAAGGGVSS
NFDPLDVAQYGEEEFRAAVESAENWGTYVGVHAYTPRAIQAAIKAGVRVIDHGQLMDDASAKLMAEKGVWLSMQPFLDDE
DANPFPEGSANREKQLEMTRGTDSAYALAKKYRLKTAWGTDTLFDAKLAARQGAQLAKMVRWYTPGEVLVMATGTNAELL
ALSGKRAPYKGRLGVVEVGALADLLLVDGDPMADINLLADPERRLLVIMKDGKLYKNRLTH
>Mature_460_residues
AHFRPLVIALAAAPLLAVMPATAHSPQAPAAPVAVDAKAAPAEVLFRNVRVFDGKTARLTAPSNVLVKGNSIAAIGEAAA
SSTATVIDGGGRTLMPGLIDAHWHSMMAAIPLKDGLSAHPGFINIVAAGAAKDTLMRGFTSVRDLAGPAWGLKRAIDEGV
TPGPRIWPSGAMISQTSGHADYRAFSDLPRSPSSPPHSTEVMGAARIADGPDEVRRAVREQLMMGASQIKLAAGGGVSSN
FDPLDVAQYGEEEFRAAVESAENWGTYVGVHAYTPRAIQAAIKAGVRVIDHGQLMDDASAKLMAEKGVWLSMQPFLDDED
ANPFPEGSANREKQLEMTRGTDSAYALAKKYRLKTAWGTDTLFDAKLAARQGAQLAKMVRWYTPGEVLVMATGTNAELLA
LSGKRAPYKGRLGVVEVGALADLLLVDGDPMADINLLADPERRLLVIMKDGKLYKNRLTH

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=330, Percent_Identity=38.1818181818182, Blast_Score=190, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48825; Mature: 48694

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHFRPLVIALAAAPLLAVMPATAHSPQAPAAPVAVDAKAAPAEVLFRNVRVFDGKTARL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHEEECCCEEEE
TAPSNVLVKGNSIAAIGEAAASSTATVIDGGGRTLMPGLIDAHWHSMMAAIPLKDGLSAH
ECCCCEEEECCCEEEHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCC
PGFINIVAAGAAKDTLMRGFTSVRDLAGPAWGLKRAIDEGVTPGPRIWPSGAMISQTSGH
CCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
ADYRAFSDLPRSPSSPPHSTEVMGAARIADGPDEVRRAVREQLMMGASQIKLAAGGGVSS
CHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCC
NFDPLDVAQYGEEEFRAAVESAENWGTYVGVHAYTPRAIQAAIKAGVRVIDHGQLMDDAS
CCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEECCCCCCCHH
AKLMAEKGVWLSMQPFLDDEDANPFPEGSANREKQLEMTRGTDSAYALAKKYRLKTAWGT
HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHEEEECCCC
DTLFDAKLAARQGAQLAKMVRWYTPGEVLVMATGTNAELLALSGKRAPYKGRLGVVEVGA
CHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEECCC
LADLLLVDGDPMADINLLADPERRLLVIMKDGKLYKNRLTH
CEEEEEECCCCCCCEEEEECCCCEEEEEEECCCHHHHHCCC
>Mature Secondary Structure 
AHFRPLVIALAAAPLLAVMPATAHSPQAPAAPVAVDAKAAPAEVLFRNVRVFDGKTARL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHEEECCCEEEE
TAPSNVLVKGNSIAAIGEAAASSTATVIDGGGRTLMPGLIDAHWHSMMAAIPLKDGLSAH
ECCCCEEEECCCEEEHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCC
PGFINIVAAGAAKDTLMRGFTSVRDLAGPAWGLKRAIDEGVTPGPRIWPSGAMISQTSGH
CCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
ADYRAFSDLPRSPSSPPHSTEVMGAARIADGPDEVRRAVREQLMMGASQIKLAAGGGVSS
CHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCC
NFDPLDVAQYGEEEFRAAVESAENWGTYVGVHAYTPRAIQAAIKAGVRVIDHGQLMDDAS
CCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEECCCCCCCHH
AKLMAEKGVWLSMQPFLDDEDANPFPEGSANREKQLEMTRGTDSAYALAKKYRLKTAWGT
HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHEEEECCCC
DTLFDAKLAARQGAQLAKMVRWYTPGEVLVMATGTNAELLALSGKRAPYKGRLGVVEVGA
CHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEECCC
LADLLLVDGDPMADINLLADPERRLLVIMKDGKLYKNRLTH
CEEEEEECCCCCCCEEEEECCCCEEEEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA