| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265922
Identifier: 124265922
GI number: 124265922
Start: 756025
End: 757356
Strand: Reverse
Name: 124265922
Synonym: Mpe_A0729
Alternate gene names: NA
Gene position: 757356-756025 (Counterclockwise)
Preceding gene: 124265923
Following gene: 124265921
Centisome position: 18.73
GC content: 67.72
Gene sequence:
>1332_bases ATGGCGATTCCGTACCTCAGCAAGCTCCGCCACCAGCTCCGCGTCTGGAAAGAGATCCGCGCGATGTACCGCGCCGTCGA TGCCTTGCCGCCGGGGCCCTCGCTTCGGCGCGAGGGCACGGTGCAGCGGCTCCTGATCGTCCCCAGCGACCCGTGGACGC TGGTCGGCGCCAAGGGTGACGAGGCCATGATGCAAGGGGTCGTGAAGCGGCTCCGCGATGCGTCACCGAACCTACGGGTG GGCGTGCTCACCGCGACGCCCGCGGCCCAGAGCGCCGCGACTGCGCTCGGGTTCGAGCCGGTCGATGCCTGGACCAGCCC CATGGCAGAGGGACTTCGCACCGTCCACGCCTTTGCGCCCGATGCATTGGCCGTGGTGGGCGCGGACGTGATGGACGGGT ACTACAGCCCGCTGACGACTGCGCGCATGCTGCTCACCGCGGAGTCGGTCGCGCGGGCCGGCGCTCGCGTCTGCATTCTC GGATTCAGCTTCAACGAGCACCCGCATCCTCGGCTCAAACCGATCTTCGATCGGCTGTCCCCGACGATCGCCGTCAACGT TCGGGACCAGCTGTCGCTCGATCGTTTCAGGCGCTTTACTCACGCCAAGGCCCGCTTGGTGACGGACGCGGCGTTCATGC TCGCACCCGACGACGCCGGCCCGGCAGTCGTTGCGGCGGACGCGTGGGCCACCTCCCGTCGCCGCGCAGGAGACGTGGTG ATCGGCTTCAACATCCACCCGATGCTGATCCGCAACGCCACGCCGGAGCAGGTACAGGGATTTGTGCACAGCGCCGTGCA GGCGCTTCGGGAGGTTTGCTCGCAGCGCGCCGTCTCCGTGGCGCTCATTTCGCATGACTACCGAGGACAGGAGAGCGACG ACGCCTGCCTGGCACCGATCTTCCAGGCCCTGTCGACGGAGTTGGGCGACCGACTGACGTACCCGACGGCAAGGCTGTCG GCCGCGCAGTTGAAGGCAGTCGCAGGCTGCACCGATGGCGTGGTAACAGGCCGCATGCACCTGGCGATCGCCACGCTGGG CGTCGGCAAACCCGTGGCCGCACTGACCTACCAGGACAAGTTTCAAGGGCTGTTCCGGCATTTCGGCTACCCGGAGCACT ACCTGCTCGGGCCGGCGGAAAGCGGCAATCCCGCCAAGCTCGCAGCGTTGGTCACCCGCTTCGTCGACGAACTCGAGCCC CTTCGCCAGCTCGTGCACGACCATCGTCCAGCCGTGATCGCGGCATCGGTCCGCAATCTCGCGATCTTCACCGACCCTGC GTCATCTCCGGCGTCGACTCCGAAGGGCGCCGGCCAGCCTGTTGCCCCATGA
Upstream 100 bases:
>100_bases CCCACGTCCTTCGCAACACGCTCGCGCTCGTGCGGCCTCGACGCGAGCCTGCCGCCATCGCCACGCCGACCTCCGACACT CCTACTCCGTAGACCTTCGC
Downstream 100 bases:
>100_bases GCACCTCGACCCAGATCAAGGTCATCAGCATGGCCTCGGCCCATCAGCGACGCGAGCAGTTCGCGGCGGGTGCGGCGCAC GGCACTGCTCGCTGGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MAIPYLSKLRHQLRVWKEIRAMYRAVDALPPGPSLRREGTVQRLLIVPSDPWTLVGAKGDEAMMQGVVKRLRDASPNLRV GVLTATPAAQSAATALGFEPVDAWTSPMAEGLRTVHAFAPDALAVVGADVMDGYYSPLTTARMLLTAESVARAGARVCIL GFSFNEHPHPRLKPIFDRLSPTIAVNVRDQLSLDRFRRFTHAKARLVTDAAFMLAPDDAGPAVVAADAWATSRRRAGDVV IGFNIHPMLIRNATPEQVQGFVHSAVQALREVCSQRAVSVALISHDYRGQESDDACLAPIFQALSTELGDRLTYPTARLS AAQLKAVAGCTDGVVTGRMHLAIATLGVGKPVAALTYQDKFQGLFRHFGYPEHYLLGPAESGNPAKLAALVTRFVDELEP LRQLVHDHRPAVIAASVRNLAIFTDPASSPASTPKGAGQPVAP
Sequences:
>Translated_443_residues MAIPYLSKLRHQLRVWKEIRAMYRAVDALPPGPSLRREGTVQRLLIVPSDPWTLVGAKGDEAMMQGVVKRLRDASPNLRV GVLTATPAAQSAATALGFEPVDAWTSPMAEGLRTVHAFAPDALAVVGADVMDGYYSPLTTARMLLTAESVARAGARVCIL GFSFNEHPHPRLKPIFDRLSPTIAVNVRDQLSLDRFRRFTHAKARLVTDAAFMLAPDDAGPAVVAADAWATSRRRAGDVV IGFNIHPMLIRNATPEQVQGFVHSAVQALREVCSQRAVSVALISHDYRGQESDDACLAPIFQALSTELGDRLTYPTARLS AAQLKAVAGCTDGVVTGRMHLAIATLGVGKPVAALTYQDKFQGLFRHFGYPEHYLLGPAESGNPAKLAALVTRFVDELEP LRQLVHDHRPAVIAASVRNLAIFTDPASSPASTPKGAGQPVAP >Mature_442_residues AIPYLSKLRHQLRVWKEIRAMYRAVDALPPGPSLRREGTVQRLLIVPSDPWTLVGAKGDEAMMQGVVKRLRDASPNLRVG VLTATPAAQSAATALGFEPVDAWTSPMAEGLRTVHAFAPDALAVVGADVMDGYYSPLTTARMLLTAESVARAGARVCILG FSFNEHPHPRLKPIFDRLSPTIAVNVRDQLSLDRFRRFTHAKARLVTDAAFMLAPDDAGPAVVAADAWATSRRRAGDVVI GFNIHPMLIRNATPEQVQGFVHSAVQALREVCSQRAVSVALISHDYRGQESDDACLAPIFQALSTELGDRLTYPTARLSA AQLKAVAGCTDGVVTGRMHLAIATLGVGKPVAALTYQDKFQGLFRHFGYPEHYLLGPAESGNPAKLAALVTRFVDELEPL RQLVHDHRPAVIAASVRNLAIFTDPASSPASTPKGAGQPVAP
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47670; Mature: 47539
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPYLSKLRHQLRVWKEIRAMYRAVDALPPGPSLRREGTVQRLLIVPSDPWTLVGAKGD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCH EAMMQGVVKRLRDASPNLRVGVLTATPAAQSAATALGFEPVDAWTSPMAEGLRTVHAFAP HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC DALAVVGADVMDGYYSPLTTARMLLTAESVARAGARVCILGFSFNEHPHPRLKPIFDRLS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCC PTIAVNVRDQLSLDRFRRFTHAKARLVTDAAFMLAPDDAGPAVVAADAWATSRRRAGDVV CEEEEECHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCHHHCCCCCCCEE IGFNIHPMLIRNATPEQVQGFVHSAVQALREVCSQRAVSVALISHDYRGQESDDACLAPI EECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHH FQALSTELGDRLTYPTARLSAAQLKAVAGCTDGVVTGRMHLAIATLGVGKPVAALTYQDK HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCHHEEEEEECCCCCCHHEEEHHHH FQGLFRHFGYPEHYLLGPAESGNPAKLAALVTRFVDELEPLRQLVHDHRPAVIAASVRNL HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCE AIFTDPASSPASTPKGAGQPVAP EEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIPYLSKLRHQLRVWKEIRAMYRAVDALPPGPSLRREGTVQRLLIVPSDPWTLVGAKGD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCH EAMMQGVVKRLRDASPNLRVGVLTATPAAQSAATALGFEPVDAWTSPMAEGLRTVHAFAP HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC DALAVVGADVMDGYYSPLTTARMLLTAESVARAGARVCILGFSFNEHPHPRLKPIFDRLS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCC PTIAVNVRDQLSLDRFRRFTHAKARLVTDAAFMLAPDDAGPAVVAADAWATSRRRAGDVV CEEEEECHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCHHHCCCCCCCEE IGFNIHPMLIRNATPEQVQGFVHSAVQALREVCSQRAVSVALISHDYRGQESDDACLAPI EECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHH FQALSTELGDRLTYPTARLSAAQLKAVAGCTDGVVTGRMHLAIATLGVGKPVAALTYQDK HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCHHEEEEEECCCCCCHHEEEHHHH FQGLFRHFGYPEHYLLGPAESGNPAKLAALVTRFVDELEPLRQLVHDHRPAVIAASVRNL HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCE AIFTDPASSPASTPKGAGQPVAP EEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA