| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265921
Identifier: 124265921
GI number: 124265921
Start: 755234
End: 755995
Strand: Reverse
Name: 124265921
Synonym: Mpe_A0728
Alternate gene names: NA
Gene position: 755995-755234 (Counterclockwise)
Preceding gene: 124265922
Following gene: 124265920
Centisome position: 18.69
GC content: 64.96
Gene sequence:
>762_bases ATGGCCTCGGCCCATCAGCGACGCGAGCAGTTCGCGGCGGGTGCGGCGCACGGCACTGCTCGCTGGGAGTTCTTCGACGC GCTCCGTCTTCCCGCGCAGGGGCTGCACTACGACGAGCCGCTGACCGTGCGCCGATTCGGTCGCGCGCTGAAGCCGGGCG AGGTGGGTTGCTATGCCAGCCACTACGAGGTCTGGCGCCAGTTCCTGATGTCGGCTGCCGATCAGTTGCTGGTCTTCGAA GACGACGTCATGGTCGACTGGCCGCTCATCGAGCAACTCTGCGCGCACCGCCTGGCCGATCATGGCATCGACGTGCTGCG CCTGTACACCTCGCACCCCATCAACGTGCGGATCGCCAAGTACAAGCTGCTGTCCGACCACAGCCACTTGATGCAGGTGC GAGGCTATCTCTACGGCACCCAGGCCTATGTGCTGAGTCGTCGCGGCGCCGAAGCGTTGTTGTCGGCCTGTCGGGTCATG ACGATGCCCGTGGATTGGGCGATGTCCCGCTACTGGGTATGCGGGATGCCCGCGTTCACGCTGTTCCCGTTTCCAGTACT TGAACGCCATGGACCCTCGACGATCGAGCATGCCCAGCAGATCGGCGCATCGTCCCTGGCCTCTCATCGCGTAGACCGGT TTCTCTGGAGGTTGCGAGACCGCGCAGCCCGAGCATGGTTCGACCTGACTTCCTCTCCTGCGTCGCCAATGGGCTCGACG GCTGACGTCGGCGGCCCCTATCTCGGACCATCGGGCACGTAG
Upstream 100 bases:
>100_bases CGATCTTCACCGACCCTGCGTCATCTCCGGCGTCGACTCCGAAGGGCGCCGGCCAGCCTGTTGCCCCATGAGCACCTCGA CCCAGATCAAGGTCATCAGC
Downstream 100 bases:
>100_bases AGCCGCCGCGGTCCATCAAGCCGCACCTCGCCGAGCATGTAAAGGCATGAACTGGCTCGTTCACCGGTTCGAACTGGCGC GCGGCGGCCAGGCAGACAAC
Product: LPS biosynthesis glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyltransferase; LPS Biosynthesis Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MASAHQRREQFAAGAAHGTARWEFFDALRLPAQGLHYDEPLTVRRFGRALKPGEVGCYASHYEVWRQFLMSAADQLLVFE DDVMVDWPLIEQLCAHRLADHGIDVLRLYTSHPINVRIAKYKLLSDHSHLMQVRGYLYGTQAYVLSRRGAEALLSACRVM TMPVDWAMSRYWVCGMPAFTLFPFPVLERHGPSTIEHAQQIGASSLASHRVDRFLWRLRDRAARAWFDLTSSPASPMGST ADVGGPYLGPSGT
Sequences:
>Translated_253_residues MASAHQRREQFAAGAAHGTARWEFFDALRLPAQGLHYDEPLTVRRFGRALKPGEVGCYASHYEVWRQFLMSAADQLLVFE DDVMVDWPLIEQLCAHRLADHGIDVLRLYTSHPINVRIAKYKLLSDHSHLMQVRGYLYGTQAYVLSRRGAEALLSACRVM TMPVDWAMSRYWVCGMPAFTLFPFPVLERHGPSTIEHAQQIGASSLASHRVDRFLWRLRDRAARAWFDLTSSPASPMGST ADVGGPYLGPSGT >Mature_252_residues ASAHQRREQFAAGAAHGTARWEFFDALRLPAQGLHYDEPLTVRRFGRALKPGEVGCYASHYEVWRQFLMSAADQLLVFED DVMVDWPLIEQLCAHRLADHGIDVLRLYTSHPINVRIAKYKLLSDHSHLMQVRGYLYGTQAYVLSRRGAEALLSACRVMT MPVDWAMSRYWVCGMPAFTLFPFPVLERHGPSTIEHAQQIGASSLASHRVDRFLWRLRDRAARAWFDLTSSPASPMGSTA DVGGPYLGPSGT
Specific function: Unknown
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28504; Mature: 28373
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAHQRREQFAAGAAHGTARWEFFDALRLPAQGLHYDEPLTVRRFGRALKPGEVGCYAS CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHH HYEVWRQFLMSAADQLLVFEDDVMVDWPLIEQLCAHRLADHGIDVLRLYTSHPINVRIAK HHHHHHHHHHHHHHCEEEEECCCEECCHHHHHHHHHHHHHCCHHEEHHHCCCCCEEEEEE YKLLSDHSHLMQVRGYLYGTQAYVLSRRGAEALLSACRVMTMPVDWAMSRYWVCGMPAFT EEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHEECCCCHHH LFPFPVLERHGPSTIEHAQQIGASSLASHRVDRFLWRLRDRAARAWFDLTSSPASPMGST HCCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ADVGGPYLGPSGT CCCCCCCCCCCCC >Mature Secondary Structure ASAHQRREQFAAGAAHGTARWEFFDALRLPAQGLHYDEPLTVRRFGRALKPGEVGCYAS CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHH HYEVWRQFLMSAADQLLVFEDDVMVDWPLIEQLCAHRLADHGIDVLRLYTSHPINVRIAK HHHHHHHHHHHHHHCEEEEECCCEECCHHHHHHHHHHHHHCCHHEEHHHCCCCCEEEEEE YKLLSDHSHLMQVRGYLYGTQAYVLSRRGAEALLSACRVMTMPVDWAMSRYWVCGMPAFT EEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHEECCCCHHH LFPFPVLERHGPSTIEHAQQIGASSLASHRVDRFLWRLRDRAARAWFDLTSSPASPMGST HCCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ADVGGPYLGPSGT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA