| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is wzxC [H]
Identifier: 124265923
GI number: 124265923
Start: 757365
End: 758882
Strand: Reverse
Name: wzxC [H]
Synonym: Mpe_A0730
Alternate gene names: 124265923
Gene position: 758882-757365 (Counterclockwise)
Preceding gene: 124265924
Following gene: 124265922
Centisome position: 18.76
GC content: 62.91
Gene sequence:
>1518_bases TTGTCGCTATTGGGAGTCGGAACTTTGAGTTCGTCGCTTAGAGAGAAAGTTCGTTCTGGCTTGTTGTGGTCGGCCATTCA GAGTTGGTGTGTCCGCTTCAGTTCACTCCTTCTGCTGACGGTTGTGGCGCGGGTGCTATCACCCGAGCAACTCGGCCTGT TCGCTGCGGCCATGGTTGTCCTGACCTTCTTCAGCATGCTGTCTGAGCAAGGACTGAGCGAAGCCGTGGTTCAGCGGGAA CACATATCGCCAGAGCAACTCAGCGCTGTCTTCTGGCTCAACTTGCTGGTGTCGATCGTGTTGGTGGTGGTCGTGTGGGT GACCGCCCCGCAGATCGCGCATCTCATGAACATCGCGGAACTGGCGCCGATCCTGCAGATTGCCTCGCTGGCCCTGCCGA TCTCGGCCGTCACGTTCGGACAGATGGCTGTTCGGCGACGCACGTTCGGCTATCGCTGGATAGCGACGACCGCAATGGTG TCCACGGCCGTGGGAAGCATCGTGCTGCTGACACTACTCTTTGCGGGTTGGGGCGTCTGGAGCTTGGTTGCGCAGGCGCT GACATCGTCGCTCGTGACGGCCGCACTCATGTGGATGCGCCCAGGTTGGAAATTGACGCGCCGCGTCGACTTTGAAGGCG TCCGGCCGCTGATGGTTTACGGTGGCAATCGATTGGGGACGTACCTCCTCGACTTCGCCAACACGCGCTACGTCGAGTTG TTTCTGGCATCCACCCTGGGGCCAGCGGCGCTCGCTGTCTACACGGTTGGACTCAAGCTGTACCAGGCACTTCTTCAGAT GCTCGGTTCAACCGTCCTCGACGTCGCCCACAGCGGATTCTCCAGGCTGGCCAACGATCGCCCGGGGCTGATTGCGGCGT ACTACAAGAGCATCAGCCTGACCGCAACCGTGGCCGTGCCCATCTTCTGCATGGTGGCGGCCGTCGCCCCGTCGTTGACC GTCGTGCTGTTCGGCGCGAAGTGGCATGCCAGCGCCGAGGTGATGCGGTGGATGGGCCTGCTCGGCGCCGTGCAGGTGCT CCAGTTCTACAACGGCACCGTCTACAACGCGATCGGTCGCCCGTCGATCGGCCTGAAGTTCATGGTGGTGAAGGTCGTTC TGACCTTCGGCGCCCTGGCGCTCGCGCGAGACTCCGGGATGACGGGCCTGCTGCATGCCTACGTGATCAGTCAACTGGCC ACCACGCCGATGAGCTTCTATCTGGTCAGGCGCCTGATCGGTGTTTCGCTGTCCGAGCTCCTGCGCCGGATCTGGCCGAT GCTGACGTCGAGTGCCCTGATGGTCGGCGCGGCGGTGCTCTCGCAGGAGTTCCTGCGCGCCGAAGGGCTGCCGACGCTCG TCGTCCTGATCGGGAGTTCGCTGGCCGGAGCGGTCATCTATCTGGCCTCGATGCAGTTGATCGCGCCCCACGTCCTTCGC AACACGCTCGCGCTCGTGCGGCCTCGACGCGAGCCTGCCGCCATCGCCACGCCGACCTCCGACACTCCTACTCCGTAG
Upstream 100 bases:
>100_bases CTTGGCCGTTGGATATGCCGATGCGCAGGCAATGGTGCCAAGGTCACCACGTCGCAACCTAGAAACGGTTGTCACTTTGC ACGAGCAGTGATTCCGGCTC
Downstream 100 bases:
>100_bases ACCTTCGCATGGCGATTCCGTACCTCAGCAAGCTCCGCCACCAGCTCCGCGTCTGGAAAGAGATCCGCGCGATGTACCGC GCCGTCGATGCCTTGCCGCC
Product: putative polysaccharide transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSLLGVGTLSSSLREKVRSGLLWSAIQSWCVRFSSLLLLTVVARVLSPEQLGLFAAAMVVLTFFSMLSEQGLSEAVVQRE HISPEQLSAVFWLNLLVSIVLVVVVWVTAPQIAHLMNIAELAPILQIASLALPISAVTFGQMAVRRRTFGYRWIATTAMV STAVGSIVLLTLLFAGWGVWSLVAQALTSSLVTAALMWMRPGWKLTRRVDFEGVRPLMVYGGNRLGTYLLDFANTRYVEL FLASTLGPAALAVYTVGLKLYQALLQMLGSTVLDVAHSGFSRLANDRPGLIAAYYKSISLTATVAVPIFCMVAAVAPSLT VVLFGAKWHASAEVMRWMGLLGAVQVLQFYNGTVYNAIGRPSIGLKFMVVKVVLTFGALALARDSGMTGLLHAYVISQLA TTPMSFYLVRRLIGVSLSELLRRIWPMLTSSALMVGAAVLSQEFLRAEGLPTLVVLIGSSLAGAVIYLASMQLIAPHVLR NTLALVRPRREPAAIATPTSDTPTP
Sequences:
>Translated_505_residues MSLLGVGTLSSSLREKVRSGLLWSAIQSWCVRFSSLLLLTVVARVLSPEQLGLFAAAMVVLTFFSMLSEQGLSEAVVQRE HISPEQLSAVFWLNLLVSIVLVVVVWVTAPQIAHLMNIAELAPILQIASLALPISAVTFGQMAVRRRTFGYRWIATTAMV STAVGSIVLLTLLFAGWGVWSLVAQALTSSLVTAALMWMRPGWKLTRRVDFEGVRPLMVYGGNRLGTYLLDFANTRYVEL FLASTLGPAALAVYTVGLKLYQALLQMLGSTVLDVAHSGFSRLANDRPGLIAAYYKSISLTATVAVPIFCMVAAVAPSLT VVLFGAKWHASAEVMRWMGLLGAVQVLQFYNGTVYNAIGRPSIGLKFMVVKVVLTFGALALARDSGMTGLLHAYVISQLA TTPMSFYLVRRLIGVSLSELLRRIWPMLTSSALMVGAAVLSQEFLRAEGLPTLVVLIGSSLAGAVIYLASMQLIAPHVLR NTLALVRPRREPAAIATPTSDTPTP >Mature_504_residues SLLGVGTLSSSLREKVRSGLLWSAIQSWCVRFSSLLLLTVVARVLSPEQLGLFAAAMVVLTFFSMLSEQGLSEAVVQREH ISPEQLSAVFWLNLLVSIVLVVVVWVTAPQIAHLMNIAELAPILQIASLALPISAVTFGQMAVRRRTFGYRWIATTAMVS TAVGSIVLLTLLFAGWGVWSLVAQALTSSLVTAALMWMRPGWKLTRRVDFEGVRPLMVYGGNRLGTYLLDFANTRYVELF LASTLGPAALAVYTVGLKLYQALLQMLGSTVLDVAHSGFSRLANDRPGLIAAYYKSISLTATVAVPIFCMVAAVAPSLTV VLFGAKWHASAEVMRWMGLLGAVQVLQFYNGTVYNAIGRPSIGLKFMVVKVVLTFGALALARDSGMTGLLHAYVISQLAT TPMSFYLVRRLIGVSLSELLRRIWPMLTSSALMVGAAVLSQEFLRAEGLPTLVVLIGSSLAGAVIYLASMQLIAPHVLRN TLALVRPRREPAAIATPTSDTPTP
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788359, Length=424, Percent_Identity=24.5283018867925, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 54511; Mature: 54379
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLGVGTLSSSLREKVRSGLLWSAIQSWCVRFSSLLLLTVVARVLSPEQLGLFAAAMVV CCCEECHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LTFFSMLSEQGLSEAVVQREHISPEQLSAVFWLNLLVSIVLVVVVWVTAPQIAHLMNIAE HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPILQIASLALPISAVTFGQMAVRRRTFGYRWIATTAMVSTAVGSIVLLTLLFAGWGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SLVAQALTSSLVTAALMWMRPGWKLTRRVDFEGVRPLMVYGGNRLGTYLLDFANTRYVEL HHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHH FLASTLGPAALAVYTVGLKLYQALLQMLGSTVLDVAHSGFSRLANDRPGLIAAYYKSISL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TATVAVPIFCMVAAVAPSLTVVLFGAKWHASAEVMRWMGLLGAVQVLQFYNGTVYNAIGR HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC PSIGLKFMVVKVVLTFGALALARDSGMTGLLHAYVISQLATTPMSFYLVRRLIGVSLSEL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHH LRRIWPMLTSSALMVGAAVLSQEFLRAEGLPTLVVLIGSSLAGAVIYLASMQLIAPHVLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NTLALVRPRREPAAIATPTSDTPTP HHHHHHCCCCCCCEEECCCCCCCCC >Mature Secondary Structure SLLGVGTLSSSLREKVRSGLLWSAIQSWCVRFSSLLLLTVVARVLSPEQLGLFAAAMVV CCEECHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LTFFSMLSEQGLSEAVVQREHISPEQLSAVFWLNLLVSIVLVVVVWVTAPQIAHLMNIAE HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPILQIASLALPISAVTFGQMAVRRRTFGYRWIATTAMVSTAVGSIVLLTLLFAGWGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SLVAQALTSSLVTAALMWMRPGWKLTRRVDFEGVRPLMVYGGNRLGTYLLDFANTRYVEL HHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHH FLASTLGPAALAVYTVGLKLYQALLQMLGSTVLDVAHSGFSRLANDRPGLIAAYYKSISL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TATVAVPIFCMVAAVAPSLTVVLFGAKWHASAEVMRWMGLLGAVQVLQFYNGTVYNAIGR HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC PSIGLKFMVVKVVLTFGALALARDSGMTGLLHAYVISQLATTPMSFYLVRRLIGVSLSEL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHH LRRIWPMLTSSALMVGAAVLSQEFLRAEGLPTLVVLIGSSLAGAVIYLASMQLIAPHVLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NTLALVRPRREPAAIATPTSDTPTP HHHHHHCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]