| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265834
Identifier: 124265834
GI number: 124265834
Start: 675558
End: 676022
Strand: Direct
Name: 124265834
Synonym: Mpe_A0641
Alternate gene names: NA
Gene position: 675558-676022 (Clockwise)
Preceding gene: 124265833
Following gene: 124265835
Centisome position: 16.7
GC content: 72.47
Gene sequence:
>465_bases ATGCGTGCGGCTCCCGCCGTGGCGGTGACGGCGTGTCCGGGGCTGGCGCGAGCGGTGCTGCGACTCCTGTCGGCGCTGGC CGTGGGCGTGACCGCGCTGTGGGCGCTGCAGCGCGGCGACGGTCTCGCGGCGACCATCACCAGCCTGGTCGTGGCTGGCG TGGCGTGTTTGCTGTGGCGAGATCGGCGAGCCTCCGCGCAGTATCTGAAGTGGGACGGCGTCGACTGGTGGTTGGCCGCG CCGGTGGATGCGTCGGAACCGCGCGTAGGCAAGGTGGCGGTGGCGCTCGACCTGGATCGCTGGTTGCTGCTGCGCTTTCG GGCGGGCGGCCTCGAAGTTCCGGCGCCCGGACCCCGTACGCGCTGGCTGGCGTTGCGGCGCCACGAGCATCCGGCCGAAT GGCATGCGCTGCGCTGTGCGCTCTATTCGCCCGCGGCATCGTCCGGCGCATCGGAAGGTCCCTGA
Upstream 100 bases:
>100_bases GCACGCCGTGAAGAACAACTTCGGTTTCGGCGGCACCAACGGCACGCTGGTGTTCAAGCGCGTCTGACGCGCGTGCCGGC CCTGAGCATTTCCCTGAACG
Downstream 100 bases:
>100_bases GCCGTGGCTGAGCCGACCAGTCCTGACAACGACGCCCTGCTGGTCGACCGCGTCAAGCAGGGCGACGTACGCGCCTTCGA GATGCTGGTCGTCAAGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MRAAPAVAVTACPGLARAVLRLLSALAVGVTALWALQRGDGLAATITSLVVAGVACLLWRDRRASAQYLKWDGVDWWLAA PVDASEPRVGKVAVALDLDRWLLLRFRAGGLEVPAPGPRTRWLALRRHEHPAEWHALRCALYSPAASSGASEGP
Sequences:
>Translated_154_residues MRAAPAVAVTACPGLARAVLRLLSALAVGVTALWALQRGDGLAATITSLVVAGVACLLWRDRRASAQYLKWDGVDWWLAA PVDASEPRVGKVAVALDLDRWLLLRFRAGGLEVPAPGPRTRWLALRRHEHPAEWHALRCALYSPAASSGASEGP >Mature_154_residues MRAAPAVAVTACPGLARAVLRLLSALAVGVTALWALQRGDGLAATITSLVVAGVACLLWRDRRASAQYLKWDGVDWWLAA PVDASEPRVGKVAVALDLDRWLLLRFRAGGLEVPAPGPRTRWLALRRHEHPAEWHALRCALYSPAASSGASEGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16461; Mature: 16461
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAPAVAVTACPGLARAVLRLLSALAVGVTALWALQRGDGLAATITSLVVAGVACLLWR CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC DRRASAQYLKWDGVDWWLAAPVDASEPRVGKVAVALDLDRWLLLRFRAGGLEVPAPGPRT CCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEECCHHEEEEECCCCEECCCCCCCH RWLALRRHEHPAEWHALRCALYSPAASSGASEGP HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRAAPAVAVTACPGLARAVLRLLSALAVGVTALWALQRGDGLAATITSLVVAGVACLLWR CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC DRRASAQYLKWDGVDWWLAAPVDASEPRVGKVAVALDLDRWLLLRFRAGGLEVPAPGPRT CCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEECCHHEEEEECCCCEECCCCCCCH RWLALRRHEHPAEWHALRCALYSPAASSGASEGP HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA