Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is rrmA [C]

Identifier: 124265810

GI number: 124265810

Start: 651523

End: 652221

Strand: Direct

Name: rrmA [C]

Synonym: Mpe_A0617

Alternate gene names: 124265810

Gene position: 651523-652221 (Clockwise)

Preceding gene: 124265809

Following gene: 124265823

Centisome position: 16.11

GC content: 62.37

Gene sequence:

>699_bases
ATGTCCGACGTCTACGACTATCTGAAGGAGTCATTGCCCGGTGACCACAGCCGCCAAGCCACCGCGGAGGCCGTGCTGCA
GGCGCGGGTGGCCAAGGGCTTCGCGCCGGCGAAAGTGCTGGACTTCGGCTGTGGTGACGGTCGCTCGATCGACCTGTTCC
GCCGCATGCTGCCGCAGGTCGACTGGACCGGCGTGGACATCGAGGCCTCGCCGGAAGTGGCCAGCCGGCGGCGGCAGGAC
GGGCGTTTCGTCACGTACGACGGTTACGAACTGCCGTTCCCTGATCGGAGCTTTCCTCTGGTGTACTCGCACCAAGTCCT
CGAGCATGTACGTAAGCCCGAACTCGCGCTGCGCGAGATTGCAAGGGTTCTGGAGCCGGACGGCCTGTTCATCGGACAGA
CCTCCCAGTTCGAGCCCTACCACTCGTACAGTCTCTGGAATTTCACGGTCTATGGTTTCAAACGCATCGTCGAGGACGCG
GGGATGCAACTCGCAGAGTTGCGTCCCGGGATCGACGGTTTCACGCTGATGCGGCGGACCTACGAGGGCCGGCCACCCGA
GATGTCGAAGTACTTCTCGCAGGAGTCGCCGATCAACGAAGAGATCGAGAAGGCGGCCGGCGACAAGAGAACCCAGGTCC
GCAACTTCAGGAAACTCCTGTTCTGCGGGCAGTTCATCTTCGTCGTGCAGTTGCGATGA

Upstream 100 bases:

>100_bases
GGTGGCGAAGCGTTGGGTGACGCTGATCGAAGACATCCTGAGCGACCGACACGAAGTCAGTTCAAACCCCTGAGACAAAC
TTGAAGAGCCCGCACACGCC

Downstream 100 bases:

>100_bases
TGCCTAGATGGAGAAGAGCACGCCGCGCCACTTGTTGAAAGTGTCGGCGAACTCTTGATCGAGCGGATTCGGCGAGAACA
GCCAGTTGCGACCATCACCC

Product: ubiquinone/menaquinone biosynthesis methylase-like protein

Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]

Alternate protein names: UbiE Family Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; UbiE/COQ5 Family Methyltransferase

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSDVYDYLKESLPGDHSRQATAEAVLQARVAKGFAPAKVLDFGCGDGRSIDLFRRMLPQVDWTGVDIEASPEVASRRRQD
GRFVTYDGYELPFPDRSFPLVYSHQVLEHVRKPELALREIARVLEPDGLFIGQTSQFEPYHSYSLWNFTVYGFKRIVEDA
GMQLAELRPGIDGFTLMRRTYEGRPPEMSKYFSQESPINEEIEKAAGDKRTQVRNFRKLLFCGQFIFVVQLR

Sequences:

>Translated_232_residues
MSDVYDYLKESLPGDHSRQATAEAVLQARVAKGFAPAKVLDFGCGDGRSIDLFRRMLPQVDWTGVDIEASPEVASRRRQD
GRFVTYDGYELPFPDRSFPLVYSHQVLEHVRKPELALREIARVLEPDGLFIGQTSQFEPYHSYSLWNFTVYGFKRIVEDA
GMQLAELRPGIDGFTLMRRTYEGRPPEMSKYFSQESPINEEIEKAAGDKRTQVRNFRKLLFCGQFIFVVQLR
>Mature_231_residues
SDVYDYLKESLPGDHSRQATAEAVLQARVAKGFAPAKVLDFGCGDGRSIDLFRRMLPQVDWTGVDIEASPEVASRRRQDG
RFVTYDGYELPFPDRSFPLVYSHQVLEHVRKPELALREIARVLEPDGLFIGQTSQFEPYHSYSLWNFTVYGFKRIVEDAG
MQLAELRPGIDGFTLMRRTYEGRPPEMSKYFSQESPINEEIEKAAGDKRTQVRNFRKLLFCGQFIFVVQLR

Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.51 [C]

Molecular weight: Translated: 26699; Mature: 26567

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVYDYLKESLPGDHSRQATAEAVLQARVAKGFAPAKVLDFGCGDGRSIDLFRRMLPQV
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCHHHHHHHCCCC
DWTGVDIEASPEVASRRRQDGRFVTYDGYELPFPDRSFPLVYSHQVLEHVRKPELALREI
CCCCCCCCCCCHHHHHHHCCCCEEEECCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
ARVLEPDGLFIGQTSQFEPYHSYSLWNFTVYGFKRIVEDAGMQLAELRPGIDGFTLMRRT
HHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHH
YEGRPPEMSKYFSQESPINEEIEKAAGDKRTQVRNFRKLLFCGQFIFVVQLR
HCCCCCHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEC
>Mature Secondary Structure 
SDVYDYLKESLPGDHSRQATAEAVLQARVAKGFAPAKVLDFGCGDGRSIDLFRRMLPQV
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCHHHHHHHCCCC
DWTGVDIEASPEVASRRRQDGRFVTYDGYELPFPDRSFPLVYSHQVLEHVRKPELALREI
CCCCCCCCCCCHHHHHHHCCCCEEEECCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
ARVLEPDGLFIGQTSQFEPYHSYSLWNFTVYGFKRIVEDAGMQLAELRPGIDGFTLMRRT
HHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHH
YEGRPPEMSKYFSQESPINEEIEKAAGDKRTQVRNFRKLLFCGQFIFVVQLR
HCCCCCHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Unidentified protein factor B [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-methionine; rRNA [C]

Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]

General reaction: Methyl group transfer [C]

Inhibitor: Mg2+; Unidentified protein factor A1 [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA