| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is qcrA [H]
Identifier: 124265557
GI number: 124265557
Start: 400817
End: 401440
Strand: Reverse
Name: qcrA [H]
Synonym: Mpe_A0364
Alternate gene names: 124265557
Gene position: 401440-400817 (Counterclockwise)
Preceding gene: 124265561
Following gene: 124265556
Centisome position: 9.93
GC content: 71.96
Gene sequence:
>624_bases ATGAACGACAACGAGACAACGCCCCCGAGCGCGACGAACGCGCCCCAGACCCCCGCCTGCGCGAGCCGCCGCGAAGCCCT GAAGCTCGGCGCCTGTGCCTGCATCGGCTTCGGCCTCGACGCCGCAGGACTGAACCGCGCACTGGCCGACGAACCTGCCG AACAACGCCCGACCAAGGGCGACCGGCTGGTCGTCGTCGGGGCCGACGGCACGCCCAAGCTGCTGGCCGCCGCCGACGTG AAGCTCGGCGAGAAGCCGGTGTTCGCGTTCCCGTACGACGCCGACAAGAAGCTGGTGCGCGACGGCTCGCGCCTGAACAA GGTGCTGCTGATCCGCCTGGAGCCGGGCTCGCTGGACGAGGCCACGCGCGCACGCTCGGCCGACGGCGTGCTGGCCTTCT CGGCGGTGTGCACCCACCAGGGCTGCGACGTCAGCGAGTGGGTCCCCGAGAGCCGGTCGCTGCTGTGCTTCTGCCACTTC TCGCGCTTCGATCCCTGCCAGTCCGGCCAGGTACTGGCAGGGCCCGCGCCACGCAGCCTGCCGCACCTGCCGATCGCGCT CGAGCGCGGCGAGCTCGCCGTGAACGGCCCGTTCAGCGCCAGCCCGGGCGTGAAGAAGGCCTGA
Upstream 100 bases:
>100_bases CATGGACAAATCGATGCCCGGAGAGACAGCGCATCGGGCCCGCCGACGGTGGCATGTGGTTTGCAAAAAGGCCCCGCCAC CGACCCCCGATGACGCTGCC
Downstream 100 bases:
>100_bases CCCATTTCCCCACGACGGACCGGCTGCGGCAACGGCCGGCCCCGCCCTGATCGATTTCCCACCGCAAGAAAAACCAACCC GAGGAGACACGACCCATGAA
Product: Rieske iron-sulfur protein
Products: NA
Alternate protein names: Cytochrome bc1 complex Rieske iron-sulfur protein; Rieske iron-sulfur protein [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNDNETTPPSATNAPQTPACASRREALKLGACACIGFGLDAAGLNRALADEPAEQRPTKGDRLVVVGADGTPKLLAAADV KLGEKPVFAFPYDADKKLVRDGSRLNKVLLIRLEPGSLDEATRARSADGVLAFSAVCTHQGCDVSEWVPESRSLLCFCHF SRFDPCQSGQVLAGPAPRSLPHLPIALERGELAVNGPFSASPGVKKA
Sequences:
>Translated_207_residues MNDNETTPPSATNAPQTPACASRREALKLGACACIGFGLDAAGLNRALADEPAEQRPTKGDRLVVVGADGTPKLLAAADV KLGEKPVFAFPYDADKKLVRDGSRLNKVLLIRLEPGSLDEATRARSADGVLAFSAVCTHQGCDVSEWVPESRSLLCFCHF SRFDPCQSGQVLAGPAPRSLPHLPIALERGELAVNGPFSASPGVKKA >Mature_207_residues MNDNETTPPSATNAPQTPACASRREALKLGACACIGFGLDAAGLNRALADEPAEQRPTKGDRLVVVGADGTPKLLAAADV KLGEKPVFAFPYDADKKLVRDGSRLNKVLLIRLEPGSLDEATRARSADGVLAFSAVCTHQGCDVSEWVPESRSLLCFCHF SRFDPCQSGQVLAGPAPRSLPHLPIALERGELAVNGPFSASPGVKKA
Specific function: Component of the menaquinol-cytochrome c reductase complex. The Rieske protein is a high potential 2Fe-2S protein [H]
COG id: COG0723
COG function: function code C; Rieske Fe-S protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: NA
Molecular weight: Translated: 21760; Mature: 21760
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNETTPPSATNAPQTPACASRREALKLGACACIGFGLDAAGLNRALADEPAEQRPTKG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHCCHHHHCCCHHHCCCCC DRLVVVGADGTPKLLAAADVKLGEKPVFAFPYDADKKLVRDGSRLNKVLLIRLEPGSLDE CEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCH ATRARSADGVLAFSAVCTHQGCDVSEWVPESRSLLCFCHFSRFDPCQSGQVLAGPAPRSL HHHHCCCCCEEEEEEEHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCC PHLPIALERGELAVNGPFSASPGVKKA CCCCEEEECCCEEECCCCCCCCCCCCC >Mature Secondary Structure MNDNETTPPSATNAPQTPACASRREALKLGACACIGFGLDAAGLNRALADEPAEQRPTKG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHCCHHHHCCCHHHCCCCC DRLVVVGADGTPKLLAAADVKLGEKPVFAFPYDADKKLVRDGSRLNKVLLIRLEPGSLDE CEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCH ATRARSADGVLAFSAVCTHQGCDVSEWVPESRSLLCFCHFSRFDPCQSGQVLAGPAPRSL HHHHCCCCCEEEEEEEHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCC PHLPIALERGELAVNGPFSASPGVKKA CCCCEEEECCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11382224; 12948626 [H]