Click here to switch to the map view.

The map label for this gene is yiaD [C]

Identifier: 124265360

GI number: 124265360

Start: 178587

End: 179135

Strand: Reverse

Name: yiaD [C]

Synonym: Mpe_A0167

Alternate gene names: 124265360

Gene position: 179135-178587 (Counterclockwise)

Preceding gene: 124265363

Following gene: 124265350

Centisome position: 4.43

GC content: 73.04

Gene sequence:

>549_bases
ATGCCCGGCATGACACGCTTCTCTCTCTTCTCTCCTTCCTACACGGCCGGGTTGCTTTGCCTGGCATTCGCCCTGGCCGG
GTGCGCCAGCCGCCCGGGAGCCCCCGGCACCCCCGGCTCCGGCAGCTCGGGCTTCGGCGGCCTGTTCGGCTCCGGCCTGT
CACCGGCGCTGGAGGCCCAGCGCCTGCGCCTCAGGGACGCGCTCAAGGGCACGCCGGTCGTCGTCGACAGCACCGGCGAC
CACCGCCTGCGTGTCGAGGTGCCGACCAAGCATGCCTTCGACCCGCAGCGCACCGCCGTCAAGCCGGCACTGGCCGCAGT
GCTCGACCAGTTCGCGACCGGCTTCAAGCCGCACGCGGCGACCACTGAACTGCAGATCGGCGCCCCGGCCGACGACAAGG
TCTCGGGCCGGATCGTCCAGGACCGCGCCGCCAGCGTGCGCGACTACCTCGTGGGCCGCGGCGTGCCGATCTCGCGCATC
GTGGGCCTGGGCCGGGCCGAAGGCGCCGGACTGGAACTGCTGGTCAGCGACCGCCCGGCCGGCAAGTGA

Upstream 100 bases:

>100_bases
GCACCGACGATTTTACGCGCGCCCGCGTTTACAAAGCCTCACCCAATACCCCTCCGCAGTCCGGCCGTCCCCCTTGTGCG
GCACGCAGGGCCCGGGTGCA

Downstream 100 bases:

>100_bases
TGCAGCCGATGTGCGCGAAGGCCCGGCGGCCGCGCGCCGTCAGGCCGTCTGCAGATCGCCGTCGGCCTCTTCGCTCAACT
CGCTGATCCAGCGCTCCTGC

Product: outer membrane protein

Products: NA

Alternate protein names: OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; OmpA/MotB; OmpA Family Protein

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPGMTRFSLFSPSYTAGLLCLAFALAGCASRPGAPGTPGSGSSGFGGLFGSGLSPALEAQRLRLRDALKGTPVVVDSTGD
HRLRVEVPTKHAFDPQRTAVKPALAAVLDQFATGFKPHAATTELQIGAPADDKVSGRIVQDRAASVRDYLVGRGVPISRI
VGLGRAEGAGLELLVSDRPAGK

Sequences:

>Translated_182_residues
MPGMTRFSLFSPSYTAGLLCLAFALAGCASRPGAPGTPGSGSSGFGGLFGSGLSPALEAQRLRLRDALKGTPVVVDSTGD
HRLRVEVPTKHAFDPQRTAVKPALAAVLDQFATGFKPHAATTELQIGAPADDKVSGRIVQDRAASVRDYLVGRGVPISRI
VGLGRAEGAGLELLVSDRPAGK
>Mature_181_residues
PGMTRFSLFSPSYTAGLLCLAFALAGCASRPGAPGTPGSGSSGFGGLFGSGLSPALEAQRLRLRDALKGTPVVVDSTGDH
RLRVEVPTKHAFDPQRTAVKPALAAVLDQFATGFKPHAATTELQIGAPADDKVSGRIVQDRAASVRDYLVGRGVPISRIV
GLGRAEGAGLELLVSDRPAGK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18720; Mature: 18588

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGMTRFSLFSPSYTAGLLCLAFALAGCASRPGAPGTPGSGSSGFGGLFGSGLSPALEAQ
CCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHH
RLRLRDALKGTPVVVDSTGDHRLRVEVPTKHAFDPQRTAVKPALAAVLDQFATGFKPHAA
HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
TTELQIGAPADDKVSGRIVQDRAASVRDYLVGRGVPISRIVGLGRAEGAGLELLVSDRPA
CCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCC
GK
CC
>Mature Secondary Structure 
PGMTRFSLFSPSYTAGLLCLAFALAGCASRPGAPGTPGSGSSGFGGLFGSGLSPALEAQ
CCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHH
RLRLRDALKGTPVVVDSTGDHRLRVEVPTKHAFDPQRTAVKPALAAVLDQFATGFKPHAA
HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
TTELQIGAPADDKVSGRIVQDRAASVRDYLVGRGVPISRIVGLGRAEGAGLELLVSDRPA
CCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCC
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA