| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265280
Identifier: 124265280
GI number: 124265280
Start: 83755
End: 84468
Strand: Reverse
Name: 124265280
Synonym: Mpe_A0087
Alternate gene names: NA
Gene position: 84468-83755 (Counterclockwise)
Preceding gene: 124265281
Following gene: 124265276
Centisome position: 2.09
GC content: 69.47
Gene sequence:
>714_bases ATGAGGATCTGTCGTGTGCGCGGACTGAACGCCGCCCTGATGCTCGGCGTGCTGGGGTCGCTGGCGGTGGACGCCTCGTC GCAGGAGGTCAAGCAGGGCAGCGCCATCTACACCTGCACCAATGCCGCCGGCCGCACCCTCACGCGCGACCGCCCGATCG CCGAATGCATGGACCGCGAGCAGCGCGTGCTCAACAGCGATGGTTCGCTGCGCACCGTGCTGCAACCCAGTCTCACGTCC GATGAGCGCGCGGCGCATGAGGAGGCCGAGCGCCGCAAGGCGCAGGAGCGCGCGAACAAGCAGGAGGCGATCCGCCGCGA TCGCAACCTGCTGGCGCGCTTTCCGAACGAGGCCGCGCACAACAAGGCCCGAGATGCCGCGCTGAACGCCACGCGCAGCG GCATCCAGGCCTCGGAGCAGCGTTTGGCCGACCTGCAGAAGGAGCGCAAGCCGCTGCTCGACGAGGCCGAGTTCTACAAG GGCAAAAACCTACCGGGCAAGCTCAAGGGGCAGATCGAGTCGGTGGACGTGAGCATCGAGGCGCAGCGCGCGCTGATCGT CAACCAGCAGGCCGAGGTCGGTCGCATCACGGCGCTGTTCGACGCCGAACTGGCCCGGCTCAAGCGGCTGTGGGGTGGCG CCGATCCGGGATCGCTCGGCCCGCTGCCGCAGTCGGCGCTGGCCGGTCAGGCCGCGCCGCCACCCAAGCCTTGA
Upstream 100 bases:
>100_bases GCGCCAGGCTGACCCGGCGCTGGCACAACACCTGCCACGGGTGCAGGCCTACCGGGATCGCTACGGCGTCTGAGACATGA AGGAACGGGGAGCGGGCGGG
Downstream 100 bases:
>100_bases GCCGCGCCGGCCGGAGGCCGCCGCTCTCCGCCGTCAACCGAGCTTCTTCTTGAGCAGCTCGCTGAGTTGCGTGGGGTTGG CCTTGCCCTTGCTCGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRICRVRGLNAALMLGVLGSLAVDASSQEVKQGSAIYTCTNAAGRTLTRDRPIAECMDREQRVLNSDGSLRTVLQPSLTS DERAAHEEAERRKAQERANKQEAIRRDRNLLARFPNEAAHNKARDAALNATRSGIQASEQRLADLQKERKPLLDEAEFYK GKNLPGKLKGQIESVDVSIEAQRALIVNQQAEVGRITALFDAELARLKRLWGGADPGSLGPLPQSALAGQAAPPPKP
Sequences:
>Translated_237_residues MRICRVRGLNAALMLGVLGSLAVDASSQEVKQGSAIYTCTNAAGRTLTRDRPIAECMDREQRVLNSDGSLRTVLQPSLTS DERAAHEEAERRKAQERANKQEAIRRDRNLLARFPNEAAHNKARDAALNATRSGIQASEQRLADLQKERKPLLDEAEFYK GKNLPGKLKGQIESVDVSIEAQRALIVNQQAEVGRITALFDAELARLKRLWGGADPGSLGPLPQSALAGQAAPPPKP >Mature_237_residues MRICRVRGLNAALMLGVLGSLAVDASSQEVKQGSAIYTCTNAAGRTLTRDRPIAECMDREQRVLNSDGSLRTVLQPSLTS DERAAHEEAERRKAQERANKQEAIRRDRNLLARFPNEAAHNKARDAALNATRSGIQASEQRLADLQKERKPLLDEAEFYK GKNLPGKLKGQIESVDVSIEAQRALIVNQQAEVGRITALFDAELARLKRLWGGADPGSLGPLPQSALAGQAAPPPKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25820; Mature: 25820
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRICRVRGLNAALMLGVLGSLAVDASSQEVKQGSAIYTCTNAAGRTLTRDRPIAECMDRE CCEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHH QRVLNSDGSLRTVLQPSLTSDERAAHEEAERRKAQERANKQEAIRRDRNLLARFPNEAAH HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH NKARDAALNATRSGIQASEQRLADLQKERKPLLDEAEFYKGKNLPGKLKGQIESVDVSIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCEEEEEEEEE AQRALIVNQQAEVGRITALFDAELARLKRLWGGADPGSLGPLPQSALAGQAAPPPKP HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MRICRVRGLNAALMLGVLGSLAVDASSQEVKQGSAIYTCTNAAGRTLTRDRPIAECMDRE CCEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHH QRVLNSDGSLRTVLQPSLTSDERAAHEEAERRKAQERANKQEAIRRDRNLLARFPNEAAH HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH NKARDAALNATRSGIQASEQRLADLQKERKPLLDEAEFYKGKNLPGKLKGQIESVDVSIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCEEEEEEEEE AQRALIVNQQAEVGRITALFDAELARLKRLWGGADPGSLGPLPQSALAGQAAPPPKP HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA