| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265246
Identifier: 124265246
GI number: 124265246
Start: 50582
End: 51397
Strand: Direct
Name: 124265246
Synonym: Mpe_A0053
Alternate gene names: NA
Gene position: 50582-51397 (Clockwise)
Preceding gene: 124265245
Following gene: 124265248
Centisome position: 1.25
GC content: 68.38
Gene sequence:
>816_bases GTGCTGATCAAGATCGGGTTCGACATCGAGCTGTCCGTCGCGTCGCCGATGGCGCTCATCCACCTGCTGCACGTGCACCC CACGCGGCGCGACGACCTGGTGACGCCCGAGAACTTCTGGATCACGCCCTTCTTCGGCAACGACGAATACGTCGACAGCT ACGGCAACCACTGCGGGCGCGTCAACGTGCCGCCGGGCGTGGGCTCGGTGCGCTTCACCAACGACGCGGTGGTGCGCGAT TCCGGCCTGCCCGACCCGGTGGCCTACGGCGCCTGGCAGCACGATCCACGCGACCTGCCGTTGGCGACGCTGCAGTTCCT GCTGCCCAGCCGCTACTGCGAGGTCGACAGCGAGCTGCTGAACTTCGCGTGGAACCAGTTCGGCCAGACGCCGTTGGGCT GGGCGCGCGTGCAGGCGATCTGCGATTTCGTGCACGGGCACATCCGCTTCGACTACCGGAACGCCCGCGCCAACCGCACC GCGCTCGAGGGCTACCGCGAGCGCACCGGCGTGTGCCGCGACTTCGCCCACCTGGCCGTCACGCTGTGCCGCTGCATGAA CATCCCGGCGCGCTACGTCACCGGCTACCTCGGCGACATCGGCGTGCCGCCGGCGCCCTACCCGATGGATTTCAGCGCCT GGTTCGAGGTCTACCTCGGCGAGCAGTGGTACACCTTCGACGCCCGCCACAACCAGCCTCGCATCGGCCGCATCGTGATG GGCCGCGGCCGCGACGCCGGCGACGTGCCGATCACGATGGCCTTCGGGCAGAACCAGCTGCTGCGCTTCGAGGTGACGAC CGAAGAGGTGTCATAA
Upstream 100 bases:
>100_bases CAACGCCTTGCGTCATTTGCTGCAGTGGGCGCGCCGCTTGCAGCGCACACTCGGTCGACAGGCGCTCGATCTCCCGGCGT CCTTCTTCAGGAGCCGTGCC
Downstream 100 bases:
>100_bases GCCGCGGACCCCCTCCCGTCGCGCGGCCTCAGGCCAGCACGCGCAGCAGCCAGCGGTTCAGGTCGACGATCTCCTCCGGG CACACCGAGTGCGGCATCGG
Product: transglutaminase-like domain-containing protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase-Like Cysteine Protease; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase/Protease-Like Protein; Transglutaminase/Protease; Transglutaminase-Like S Cysteine Protease; Transglutaminase; Transglutaminase-Like Superfamily Domain Protein; Cystein Protease
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLIKIGFDIELSVASPMALIHLLHVHPTRRDDLVTPENFWITPFFGNDEYVDSYGNHCGRVNVPPGVGSVRFTNDAVVRD SGLPDPVAYGAWQHDPRDLPLATLQFLLPSRYCEVDSELLNFAWNQFGQTPLGWARVQAICDFVHGHIRFDYRNARANRT ALEGYRERTGVCRDFAHLAVTLCRCMNIPARYVTGYLGDIGVPPAPYPMDFSAWFEVYLGEQWYTFDARHNQPRIGRIVM GRGRDAGDVPITMAFGQNQLLRFEVTTEEVS
Sequences:
>Translated_271_residues MLIKIGFDIELSVASPMALIHLLHVHPTRRDDLVTPENFWITPFFGNDEYVDSYGNHCGRVNVPPGVGSVRFTNDAVVRD SGLPDPVAYGAWQHDPRDLPLATLQFLLPSRYCEVDSELLNFAWNQFGQTPLGWARVQAICDFVHGHIRFDYRNARANRT ALEGYRERTGVCRDFAHLAVTLCRCMNIPARYVTGYLGDIGVPPAPYPMDFSAWFEVYLGEQWYTFDARHNQPRIGRIVM GRGRDAGDVPITMAFGQNQLLRFEVTTEEVS >Mature_271_residues MLIKIGFDIELSVASPMALIHLLHVHPTRRDDLVTPENFWITPFFGNDEYVDSYGNHCGRVNVPPGVGSVRFTNDAVVRD SGLPDPVAYGAWQHDPRDLPLATLQFLLPSRYCEVDSELLNFAWNQFGQTPLGWARVQAICDFVHGHIRFDYRNARANRT ALEGYRERTGVCRDFAHLAVTLCRCMNIPARYVTGYLGDIGVPPAPYPMDFSAWFEVYLGEQWYTFDARHNQPRIGRIVM GRGRDAGDVPITMAFGQNQLLRFEVTTEEVS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30753; Mature: 30753
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKIGFDIELSVASPMALIHLLHVHPTRRDDLVTPENFWITPFFGNDEYVDSYGNHCGR CEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCE VNVPPGVGSVRFTNDAVVRDSGLPDPVAYGAWQHDPRDLPLATLQFLLPSRYCEVDSELL EECCCCCCCEEECCCEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH NFAWNQFGQTPLGWARVQAICDFVHGHIRFDYRNARANRTALEGYRERTGVCRDFAHLAV HHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH TLCRCMNIPARYVTGYLGDIGVPPAPYPMDFSAWFEVYLGEQWYTFDARHNQPRIGRIVM HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHEECCEEEEECCCCCCCCCCEEEE GRGRDAGDVPITMAFGQNQLLRFEVTTEEVS ECCCCCCCCCEEEEECCCEEEEEEEECCCCC >Mature Secondary Structure MLIKIGFDIELSVASPMALIHLLHVHPTRRDDLVTPENFWITPFFGNDEYVDSYGNHCGR CEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCE VNVPPGVGSVRFTNDAVVRDSGLPDPVAYGAWQHDPRDLPLATLQFLLPSRYCEVDSELL EECCCCCCCEEECCCEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH NFAWNQFGQTPLGWARVQAICDFVHGHIRFDYRNARANRTALEGYRERTGVCRDFAHLAV HHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH TLCRCMNIPARYVTGYLGDIGVPPAPYPMDFSAWFEVYLGEQWYTFDARHNQPRIGRIVM HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHEECCEEEEECCCCCCCCCCEEEE GRGRDAGDVPITMAFGQNQLLRFEVTTEEVS ECCCCCCCCCEEEEECCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA