| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265248
Identifier: 124265248
GI number: 124265248
Start: 52184
End: 52762
Strand: Direct
Name: 124265248
Synonym: Mpe_A0055
Alternate gene names: NA
Gene position: 52184-52762 (Clockwise)
Preceding gene: 124265246
Following gene: 124265250
Centisome position: 1.29
GC content: 72.02
Gene sequence:
>579_bases ATGCTCGTCCTGATCCTCGGCCTTGTTCTCTTTCTCGGCACGCACTCGGTGCGCATCTTTGCGGAGCCCTGGCGCACGCG CACGCTGGCGCGCGTGGGCGAGGCGCGCTGGAAGGCCGCCTACGCGGTGGTGTCGCTGATCGGCTTCGTGCTGCTGGCGT GGGGCTACGGCCTGGCGCGGCAGCAGCCGGTGCTGCTGTGGACGCCGCCGGTTGCGATGCGCCACATTGCCGCGCTGCTG ACCCTGGTGGCCTTCGTGCTGCTGGCCGCCGCCTACGTGCCGGGCAACGGCCTCAAGGCGAAGCTGCACCATCCGATGGT GCTGAGCGTCAAGGTCTGGGCCTTTGCGCACCTGCTGGCCAACGGCACGCTGGCCGATGTGCTGCTGTTCGGCGGCTTCC TGGTCTGGGCCGTGCTGTGCTTCCGTGCCGCGCGCGGCCGGGACCGCGCTACGGGGGTGGCCACCCCGCCCGGCCGCGCC GGGGCGACCGCGATCACCGTGGTGGTCGGTGCCGTGGCGTGGGCGGTGTTCGCGTTCTGGGCCCACGGTGCATGGATCGG CGTGCGGCCGTTCGGCTGA
Upstream 100 bases:
>100_bases GTCGTCATCAGGGGCTTTCGGTGGGTTCCCGGTGATCCTACCCGTGGCACGCCCGCGGCCAAGGCTGCGTTACGCTCGCG CGCAACCACCGGAGTCCTTC
Downstream 100 bases:
>100_bases CACGGCAGCCGCTGCGCGGTGGGCTGCCTCAGACAGGCGCCCACAAAAAAAGCCCGGCCAGGGCCGGGCTTCCGATGCGG TCACAAGGACCGGCAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NnrUfamily Protein; NnrU Protein; Transmembrane Protein; NnrU-Like Protein; Nitrate Reductase Protein; NnrU Family Membrane Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLVLILGLVLFLGTHSVRIFAEPWRTRTLARVGEARWKAAYAVVSLIGFVLLAWGYGLARQQPVLLWTPPVAMRHIAALL TLVAFVLLAAAYVPGNGLKAKLHHPMVLSVKVWAFAHLLANGTLADVLLFGGFLVWAVLCFRAARGRDRATGVATPPGRA GATAITVVVGAVAWAVFAFWAHGAWIGVRPFG
Sequences:
>Translated_192_residues MLVLILGLVLFLGTHSVRIFAEPWRTRTLARVGEARWKAAYAVVSLIGFVLLAWGYGLARQQPVLLWTPPVAMRHIAALL TLVAFVLLAAAYVPGNGLKAKLHHPMVLSVKVWAFAHLLANGTLADVLLFGGFLVWAVLCFRAARGRDRATGVATPPGRA GATAITVVVGAVAWAVFAFWAHGAWIGVRPFG >Mature_192_residues MLVLILGLVLFLGTHSVRIFAEPWRTRTLARVGEARWKAAYAVVSLIGFVLLAWGYGLARQQPVLLWTPPVAMRHIAALL TLVAFVLLAAAYVPGNGLKAKLHHPMVLSVKVWAFAHLLANGTLADVLLFGGFLVWAVLCFRAARGRDRATGVATPPGRA GATAITVVVGAVAWAVFAFWAHGAWIGVRPFG
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20611; Mature: 20611
Theoretical pI: Translated: 12.18; Mature: 12.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLILGLVLFLGTHSVRIFAEPWRTRTLARVGEARWKAAYAVVSLIGFVLLAWGYGLAR CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QQPVLLWTPPVAMRHIAALLTLVAFVLLAAAYVPGNGLKAKLHHPMVLSVKVWAFAHLLA CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEHHHHHHHHHHHH NGTLADVLLFGGFLVWAVLCFRAARGRDRATGVATPPGRAGATAITVVVGAVAWAVFAFW CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AHGAWIGVRPFG HCCCEEEECCCC >Mature Secondary Structure MLVLILGLVLFLGTHSVRIFAEPWRTRTLARVGEARWKAAYAVVSLIGFVLLAWGYGLAR CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QQPVLLWTPPVAMRHIAALLTLVAFVLLAAAYVPGNGLKAKLHHPMVLSVKVWAFAHLLA CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEHHHHHHHHHHHH NGTLADVLLFGGFLVWAVLCFRAARGRDRATGVATPPGRAGATAITVVVGAVAWAVFAFW CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AHGAWIGVRPFG HCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA