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The map label for this gene is sufB [C]

Identifier: 124027409

GI number: 124027409

Start: 506312

End: 507742

Strand: Reverse

Name: sufB [C]

Synonym: Hbut_0522

Alternate gene names: 124027409

Gene position: 507742-506312 (Counterclockwise)

Preceding gene: 124027410

Following gene: 124027408

Centisome position: 30.46

GC content: 55.84

Gene sequence:

>1431_bases
ATGGCTGGTGTGCGTCCCGCACCCATGAGGGAGTTGCTTGAGGCTCGTAGTGTTGAGGAGCTGCTGGGCTTCCAGAAGCC
CTACCCGAAGGAGATAGAGATACGGGGCCGTATTGAGAGAAGCCTTGTAGAGGAAATATCACGGGTCAAGAAGGAGCCTG
ACTGGATGCGTCGTCTCCGGCTTCGCGCCCTAGAGCTATTCTACAAACTACCCATGCCCCGTTGGGTTGTTGGCATCGAG
GAGATAGACCTGGAGGAGATAGCGGCCTATGTGAAGCCTAAGGCGGAGAAGGCGGAGAGCTGGGAGGATCTCCCAGGCTG
GATAAAGGAGTACTACACGAAGCTGGGGCTCCAAGAAGCGGTGAAGCGGATGCTATCGGGACTCACAGCTGTCTTCGACA
GCGAAACCGTGCTCAACTTGACAAAGAAGGAGCTCCAGGAGAAGGGCGTTATACTGCTCCCAATGGAGGAGGCTGTGCAA
CGCTACCCCGACCTGGTTAAACAATACTTTGGCCGTGTCTTTCCCGCCTCCGACCACAAGTTTGCCGCACTACACCACGC
ATTGTGGAGCGGCGGCGCTTTCGTCTACGTACCGCCTGGTATCAGGCTCACACAGCCCATCGAGGCCTTCTTCTTCATAG
GCAGCGAGCTGGAGGGCCAGTTCGAGCACACACTCCTCATAGCGGGCGAGAACAGCTACATAGAGTTCATAGAAGGCTGT
GCCGCCCCGATGCTCAAGAAGTTTAGCTTCCACGACGGCATGGTTGAGATCTATGCTCACCGTGGCGCCCGAGTGCACTT
CTACACCGTGCAGAACTGGAGTAGGAATGTCATAAATTTCAACAATAAGCGCGCCATAGCCGAAGAGGGTGCACATGTAG
AGTGGTTAGAGGGGAGCATTGGGAGCAAGATAACCTACACATACCCAACAACCATACTCCGCGGCCGTGGAGCCTCAACA
CGCAACGTCTCAGTAGCCATAGCCAATGGCCCCTACATAAAGGATACAGGGGGCAAGGTGATACATGCCGCTCCCGATAC
ACGAAGCATCATAATCTCGAAGAGCATATCCAGCAATGGCGGCCTCTCCATTTACCGGGGCCTGGTCCGGGTAAACCGCG
GCGCTTACCGCAGTGTGAGCCACGTGCAGTGTGATAGCCTGATACTTGATGAGCGTAGCAAAGCCTACACCTACCCCCGA
AACGAGGTCAACGAGCCTACTGCTGAGGTTACACACGAAGCTAGCGTAGGCAGGCTAGGTGAAGACCAGCTATTCTACAT
GGCTAGCCGCGGCCTAAGCGAGGGCGAGGCTAAGGCCATGATAGTGCTCGGCTTCATCCAGAGCGTGCTCCGGACCCTGC
CCATGGAACTATTCGGCATACTCTCCAAGGTAATCGAACTCGAGTTTAGCGAGTACGGCGCCCTAGGCTAA

Upstream 100 bases:

>100_bases
CGAGTGGTAGACGAGGGCGGCCCAGAGCTGGCTAGGAGGATTGAACAGGAAGGCTATCGAGCCTACATGGAGGACAAGGC
GTAAAAAGGGGTGGCATGTC

Downstream 100 bases:

>100_bases
CACGTAAACATCGGATTGGAGGGAGCATTCATGGCTAGTGTAGGACAGGTGGAGAGAAGCCTAGACGCAGTGAAGCGTCG
AGCCCGAGAGCTGCTTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MAGVRPAPMRELLEARSVEELLGFQKPYPKEIEIRGRIERSLVEEISRVKKEPDWMRRLRLRALELFYKLPMPRWVVGIE
EIDLEEIAAYVKPKAEKAESWEDLPGWIKEYYTKLGLQEAVKRMLSGLTAVFDSETVLNLTKKELQEKGVILLPMEEAVQ
RYPDLVKQYFGRVFPASDHKFAALHHALWSGGAFVYVPPGIRLTQPIEAFFFIGSELEGQFEHTLLIAGENSYIEFIEGC
AAPMLKKFSFHDGMVEIYAHRGARVHFYTVQNWSRNVINFNNKRAIAEEGAHVEWLEGSIGSKITYTYPTTILRGRGAST
RNVSVAIANGPYIKDTGGKVIHAAPDTRSIIISKSISSNGGLSIYRGLVRVNRGAYRSVSHVQCDSLILDERSKAYTYPR
NEVNEPTAEVTHEASVGRLGEDQLFYMASRGLSEGEAKAMIVLGFIQSVLRTLPMELFGILSKVIELEFSEYGALG

Sequences:

>Translated_476_residues
MAGVRPAPMRELLEARSVEELLGFQKPYPKEIEIRGRIERSLVEEISRVKKEPDWMRRLRLRALELFYKLPMPRWVVGIE
EIDLEEIAAYVKPKAEKAESWEDLPGWIKEYYTKLGLQEAVKRMLSGLTAVFDSETVLNLTKKELQEKGVILLPMEEAVQ
RYPDLVKQYFGRVFPASDHKFAALHHALWSGGAFVYVPPGIRLTQPIEAFFFIGSELEGQFEHTLLIAGENSYIEFIEGC
AAPMLKKFSFHDGMVEIYAHRGARVHFYTVQNWSRNVINFNNKRAIAEEGAHVEWLEGSIGSKITYTYPTTILRGRGAST
RNVSVAIANGPYIKDTGGKVIHAAPDTRSIIISKSISSNGGLSIYRGLVRVNRGAYRSVSHVQCDSLILDERSKAYTYPR
NEVNEPTAEVTHEASVGRLGEDQLFYMASRGLSEGEAKAMIVLGFIQSVLRTLPMELFGILSKVIELEFSEYGALG
>Mature_475_residues
AGVRPAPMRELLEARSVEELLGFQKPYPKEIEIRGRIERSLVEEISRVKKEPDWMRRLRLRALELFYKLPMPRWVVGIEE
IDLEEIAAYVKPKAEKAESWEDLPGWIKEYYTKLGLQEAVKRMLSGLTAVFDSETVLNLTKKELQEKGVILLPMEEAVQR
YPDLVKQYFGRVFPASDHKFAALHHALWSGGAFVYVPPGIRLTQPIEAFFFIGSELEGQFEHTLLIAGENSYIEFIEGCA
APMLKKFSFHDGMVEIYAHRGARVHFYTVQNWSRNVINFNNKRAIAEEGAHVEWLEGSIGSKITYTYPTTILRGRGASTR
NVSVAIANGPYIKDTGGKVIHAAPDTRSIIISKSISSNGGLSIYRGLVRVNRGAYRSVSHVQCDSLILDERSKAYTYPRN
EVNEPTAEVTHEASVGRLGEDQLFYMASRGLSEGEAKAMIVLGFIQSVLRTLPMELFGILSKVIELEFSEYGALG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=446, Percent_Identity=35.6502242152466, Blast_Score=305, Evalue=5e-84,
Organism=Escherichia coli, GI1787971, Length=235, Percent_Identity=22.5531914893617, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53696; Mature: 53565

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVRPAPMRELLEARSVEELLGFQKPYPKEIEIRGRIERSLVEEISRVKKEPDWMRRLR
CCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
LRALELFYKLPMPRWVVGIEEIDLEEIAAYVKPKAEKAESWEDLPGWIKEYYTKLGLQEA
HHHHHHHHHCCCCCEEECHHHCCHHHHHHHHCCCHHHHCCHHCCHHHHHHHHHHHCHHHH
VKRMLSGLTAVFDSETVLNLTKKELQEKGVILLPMEEAVQRYPDLVKQYFGRVFPASDHK
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH
FAALHHALWSGGAFVYVPPGIRLTQPIEAFFFIGSELEGQFEHTLLIAGENSYIEFIEGC
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEECCCCCCCEEEEEEEECCCCHHHHHHHH
AAPMLKKFSFHDGMVEIYAHRGARVHFYTVQNWSRNVINFNNKRAIAEEGAHVEWLEGSI
HHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEHHHCCCEEEEECCCC
GSKITYTYPTTILRGRGASTRNVSVAIANGPYIKDTGGKVIHAAPDTRSIIISKSISSNG
CCEEEEECCCHHEECCCCCCCEEEEEEECCCEEECCCCEEEEECCCCCEEEEEECCCCCC
GLSIYRGLVRVNRGAYRSVSHVQCDSLILDERSKAYTYPRNEVNEPTAEVTHEASVGRLG
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
EDQLFYMASRGLSEGEAKAMIVLGFIQSVLRTLPMELFGILSKVIELEFSEYGALG
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGVRPAPMRELLEARSVEELLGFQKPYPKEIEIRGRIERSLVEEISRVKKEPDWMRRLR
CCCCCCHHHHHHHHCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
LRALELFYKLPMPRWVVGIEEIDLEEIAAYVKPKAEKAESWEDLPGWIKEYYTKLGLQEA
HHHHHHHHHCCCCCEEECHHHCCHHHHHHHHCCCHHHHCCHHCCHHHHHHHHHHHCHHHH
VKRMLSGLTAVFDSETVLNLTKKELQEKGVILLPMEEAVQRYPDLVKQYFGRVFPASDHK
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH
FAALHHALWSGGAFVYVPPGIRLTQPIEAFFFIGSELEGQFEHTLLIAGENSYIEFIEGC
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEECCCCCCCEEEEEEEECCCCHHHHHHHH
AAPMLKKFSFHDGMVEIYAHRGARVHFYTVQNWSRNVINFNNKRAIAEEGAHVEWLEGSI
HHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEHHHCCCEEEEECCCC
GSKITYTYPTTILRGRGASTRNVSVAIANGPYIKDTGGKVIHAAPDTRSIIISKSISSNG
CCEEEEECCCHHEECCCCCCCEEEEEEECCCEEECCCCEEEEECCCCCEEEEEECCCCCC
GLSIYRGLVRVNRGAYRSVSHVQCDSLILDERSKAYTYPRNEVNEPTAEVTHEASVGRLG
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
EDQLFYMASRGLSEGEAKAMIVLGFIQSVLRTLPMELFGILSKVIELEFSEYGALG
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA