Definition Hyperthermus butylicus DSM 5456 chromosome, complete genome.
Accession NC_008818
Length 1,667,163

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The map label for this gene is sufC [C]

Identifier: 124027410

GI number: 124027410

Start: 507759

End: 508514

Strand: Reverse

Name: sufC [C]

Synonym: Hbut_0523

Alternate gene names: 124027410

Gene position: 508514-507759 (Counterclockwise)

Preceding gene: 124027429

Following gene: 124027409

Centisome position: 30.5

GC content: 57.67

Gene sequence:

>756_bases
TTGGCGCTCGAGGCCAGGAATCTGGTGGCGGGTCCCGAAGGGAAAATCGTCCTCCGTGGGGTAAATATCAAGGTTCCTCA
GGGTAGTATAATAGCGCTTATGGGCCCTAATGGTAGTGGTAAAACTACGCTAGCCTATACACTGATGGGGCATCCACGCT
ATCGTGTTGAGAGTGGAGAGGTGCTACTGGACGGTGAGCCCGTCACCAGCCTTCCTCCACATGAGAGGGCTCGGCGTGGC
TTAATGCTTGGCTTCCAGAATCCTGTCGAGATACCTGGTGTCAGGCTAATCAGCTTCATCGCAGCTGCGTATAACCGGCG
TTTCGGCATCGAGGAGCGACTTATAGGCATGCCACGGCCCGAACTACACAAGCAGGCTCGGGAGCTAGCTGAGAGGCTGG
GACTCCGCTCCGAGATGCTGCAGAGAGAGGTTAACGTGGGCTTTAGCGGTGGCGAGCGGAAGAGAGCTGAGATGCTCCAG
CTCCTCCTACTCCGCCCCCGCTACGTTATCCTCGACGAGCCGGACAGCGGCCTTGACGTGGACGGTGTCCGCGTCATAGC
AGAGGCTATCCGCGAACTCGTAGAGCAGGGGACGGGTGTGCTCGTGATAACACACTATGCGAGGATTCTCCAGTTTGTCG
AGCCTAGCCACGTAGTGGTACTCGTCAATGGCCGAGTGGTAGACGAGGGCGGCCCAGAGCTGGCTAGGAGGATTGAACAG
GAAGGCTATCGAGCCTACATGGAGGACAAGGCGTAA

Upstream 100 bases:

>100_bases
TCACCACCTTAAACCAGCTTTTAGCTGGTTTTCTGCCTAGTTTGGTCTGTCGCCATCTTTATAACCGGTATTTAACGCCT
GATAAAGACAGGGTTGTTGT

Downstream 100 bases:

>100_bases
AAAGGGGTGGCATGTCATGGCTGGTGTGCGTCCCGCACCCATGAGGGAGTTGCTTGAGGCTCGTAGTGTTGAGGAGCTGC
TGGGCTTCCAGAAGCCCTAC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MALEARNLVAGPEGKIVLRGVNIKVPQGSIIALMGPNGSGKTTLAYTLMGHPRYRVESGEVLLDGEPVTSLPPHERARRG
LMLGFQNPVEIPGVRLISFIAAAYNRRFGIEERLIGMPRPELHKQARELAERLGLRSEMLQREVNVGFSGGERKRAEMLQ
LLLLRPRYVILDEPDSGLDVDGVRVIAEAIRELVEQGTGVLVITHYARILQFVEPSHVVVLVNGRVVDEGGPELARRIEQ
EGYRAYMEDKA

Sequences:

>Translated_251_residues
MALEARNLVAGPEGKIVLRGVNIKVPQGSIIALMGPNGSGKTTLAYTLMGHPRYRVESGEVLLDGEPVTSLPPHERARRG
LMLGFQNPVEIPGVRLISFIAAAYNRRFGIEERLIGMPRPELHKQARELAERLGLRSEMLQREVNVGFSGGERKRAEMLQ
LLLLRPRYVILDEPDSGLDVDGVRVIAEAIRELVEQGTGVLVITHYARILQFVEPSHVVVLVNGRVVDEGGPELARRIEQ
EGYRAYMEDKA
>Mature_250_residues
ALEARNLVAGPEGKIVLRGVNIKVPQGSIIALMGPNGSGKTTLAYTLMGHPRYRVESGEVLLDGEPVTSLPPHERARRGL
MLGFQNPVEIPGVRLISFIAAAYNRRFGIEERLIGMPRPELHKQARELAERLGLRSEMLQREVNVGFSGGERKRAEMLQL
LLLRPRYVILDEPDSGLDVDGVRVIAEAIRELVEQGTGVLVITHYARILQFVEPSHVVVLVNGRVVDEGGPELARRIEQE
GYRAYMEDKA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=225, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI21729873, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI15149474, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI4505771, Length=215, Percent_Identity=27.906976744186, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI42741659, Length=220, Percent_Identity=28.6363636363636, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI9961252, Length=215, Percent_Identity=27.906976744186, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI9665248, Length=240, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI171184400, Length=224, Percent_Identity=29.4642857142857, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI255708477, Length=217, Percent_Identity=26.2672811059908, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI9961250, Length=223, Percent_Identity=26.9058295964126, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI148612844, Length=217, Percent_Identity=26.2672811059908, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787972, Length=243, Percent_Identity=40.7407407407407, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=32.618025751073, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87081709, Length=249, Percent_Identity=28.1124497991968, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1788225, Length=255, Percent_Identity=28.6274509803922, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1786654, Length=219, Percent_Identity=30.5936073059361, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=28.0542986425339, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789864, Length=242, Percent_Identity=26.8595041322314, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790739, Length=246, Percent_Identity=28.4552845528455, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=25.7383966244726, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI87081834, Length=194, Percent_Identity=32.9896907216495, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787143, Length=241, Percent_Identity=28.6307053941909, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081791, Length=234, Percent_Identity=28.6324786324786, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=27.906976744186, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790162, Length=198, Percent_Identity=29.2929292929293, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=233, Percent_Identity=29.6137339055794, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786319, Length=215, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790467, Length=232, Percent_Identity=26.7241379310345, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=267, Percent_Identity=23.9700374531835, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787712, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=24.896265560166, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=26.9767441860465, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=30.379746835443, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788053, Length=170, Percent_Identity=31.7647058823529, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=28.0851063829787, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=25, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786703, Length=217, Percent_Identity=30.4147465437788, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=219, Percent_Identity=26.9406392694064, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788506, Length=234, Percent_Identity=28.6324786324786, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787500, Length=230, Percent_Identity=24.7826086956522, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787792, Length=204, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=26.3392857142857, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI48994883, Length=248, Percent_Identity=26.2096774193548, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=27.3972602739726, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=253, Percent_Identity=27.6679841897233, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788472, Length=212, Percent_Identity=27.8301886792453, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789586, Length=228, Percent_Identity=27.6315789473684, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87082267, Length=178, Percent_Identity=28.0898876404494, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787112, Length=226, Percent_Identity=27.8761061946903, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=23.6051502145923, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789890, Length=237, Percent_Identity=26.5822784810127, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=225, Percent_Identity=30.6666666666667, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71996809, Length=225, Percent_Identity=29.7777777777778, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17565938, Length=217, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193209708, Length=222, Percent_Identity=29.2792792792793, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17543740, Length=218, Percent_Identity=27.9816513761468, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17541710, Length=225, Percent_Identity=27.1111111111111, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=224, Percent_Identity=29.0178571428571, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=224, Percent_Identity=29.0178571428571, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71992290, Length=224, Percent_Identity=29.4642857142857, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71992285, Length=240, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=247, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=242, Percent_Identity=28.099173553719, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357907, Length=244, Percent_Identity=30.327868852459, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI17647959, Length=247, Percent_Identity=29.9595141700405, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161076682, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI161076684, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581617, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581615, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24659289, Length=234, Percent_Identity=28.6324786324786, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574150, Length=231, Percent_Identity=27.7056277056277, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007328, Length=231, Percent_Identity=27.7056277056277, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24641565, Length=219, Percent_Identity=30.5936073059361, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45552199, Length=207, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24581407, Length=207, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19920532, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580930, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27842; Mature: 27711

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MALEARNLVAGPEGKIVLRGVNIKVPQGSIIALMGPNGSGKTTLAYTLMGHPRYRVESGE
CCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCEEECCCC
VLLDGEPVTSLPPHERARRGLMLGFQNPVEIPGVRLISFIAAAYNRRFGIEERLIGMPRP
EEECCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCH
ELHKQARELAERLGLRSEMLQREVNVGFSGGERKRAEMLQLLLLRPRYVILDEPDSGLDV
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC
DGVRVIAEAIRELVEQGTGVLVITHYARILQFVEPSHVVVLVNGRVVDEGGPELARRIEQ
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEECEEEECCCHHHHHHHHH
EGYRAYMEDKA
HHHHHHHCCCC
>Mature Secondary Structure 
ALEARNLVAGPEGKIVLRGVNIKVPQGSIIALMGPNGSGKTTLAYTLMGHPRYRVESGE
CCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCEEECCCC
VLLDGEPVTSLPPHERARRGLMLGFQNPVEIPGVRLISFIAAAYNRRFGIEERLIGMPRP
EEECCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCH
ELHKQARELAERLGLRSEMLQREVNVGFSGGERKRAEMLQLLLLRPRYVILDEPDSGLDV
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC
DGVRVIAEAIRELVEQGTGVLVITHYARILQFVEPSHVVVLVNGRVVDEGGPELARRIEQ
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEEECEEEECCCHHHHHHHHH
EGYRAYMEDKA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]