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The map label for this gene is sufB [C]

Identifier: 124027408

GI number: 124027408

Start: 505100

End: 506281

Strand: Reverse

Name: sufB [C]

Synonym: Hbut_0521

Alternate gene names: 124027408

Gene position: 506281-505100 (Counterclockwise)

Preceding gene: 124027409

Following gene: 124027403

Centisome position: 30.37

GC content: 55.67

Gene sequence:

>1182_bases
ATGGCTAGTGTAGGACAGGTGGAGAGAAGCCTAGACGCAGTGAAGCGTCGAGCCCGAGAGCTGCTTGACAAGCTACCCTG
GCAACACCTAGCAGACTCACCTACTATCAAGTACTATACCGACTGGATGCTGTTTGAGAAGCAGCTCGCAGCAGTCCGTC
GGGGCGAGGATACAGCGTCTGAGCAGAGACGCTTGCCGGAAGGCTATGATGCAGCTGTAGGCTCATGCACTGCAAGCTCC
CCAGCCAATGGTCTACGGGTGTATAGGCTAGAAGAGGCGCCCCGGGAGCTAGCCAGGATCTTTGCCTCAATGCTGCAGGT
TAATGAGACGCGGCTTACTGCCGCCCACTATGCATTCCTAAAGGAGGCCTATGTGCTCGAGGTACGGGATCCTGGAGTCT
ACCGTGTAGCAGTCTGTGGGCCTGGCGGCGTCTGGGGTAGTAGCCACCTCGTAGTAGCTGTTGAGCCTGGTATAGAGGCT
GCGCTGCAGCTCGACATACTGCCAGCCGGGAGTGGCTCAACCGCGGTAGAGATTGTTGCAGGCGAGGGCTCGAGCCTAGA
ACTGCTAACCGTGGTTAGGCCTCCGGAGGCTGCAGTACATGCGCTTCTTGTGCGCCGCCTAGTCCTGGAAGGCACACAGC
TTCACTCAGCCACCATAGCCTTAGGCTCAGCCATGCATCGTATAGAGGAGAAGATCCTATTAGCAAAAAGCGCTAGTCTA
GTACACCGCGGCGCTGGAGTAGCAGCTGGAAGCCAGAAGCTAGACTACATAGCGGACATAATACACCAGGGCCCCCGGAG
CAGAAGCAGCGTAAGGCTATACAGCTTCGCACTCGACAAGAGCATTGTTGCAGCACGAGGAGTAGCAAGCATCCGCGAGA
CAGCACGGGGTAGTAGTGCAAGCTTTGACGCCGAGGTACTAATACTAGGCCAGCACGCCCAGGGCTACACAATGCCTCTC
ATGGAGATAGATACCGGGGATGTAGAACATGCAAGTCACCATGCAGCCCAGTACCGAATTTCAAGCGAACAACTATTCTA
CCTACAGAGCCGCGGGCTAAGCGAGACCGAGGCCTTAGAGCTACTACTCGCAGAAAGACTCCGTACGACAGCACAACACC
TCGAAAAACTTGCAGAGAAGGCTGAGAAGATAGTTGGAGAAATACTACTCCGCCTATCCTAG

Upstream 100 bases:

>100_bases
CATGGAACTATTCGGCATACTCTCCAAGGTAATCGAACTCGAGTTTAGCGAGTACGGCGCCCTAGGCTAACACGTAAACA
TCGGATTGGAGGGAGCATTC

Downstream 100 bases:

>100_bases
CTCTATGACGCCCACATCAAAGACCTCGAAATTACACTTTATATCAAGCCTGGCCTGGAAGCGTAAAACACCCTACCACC
AAGAGGAAACCATGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MASVGQVERSLDAVKRRARELLDKLPWQHLADSPTIKYYTDWMLFEKQLAAVRRGEDTASEQRRLPEGYDAAVGSCTASS
PANGLRVYRLEEAPRELARIFASMLQVNETRLTAAHYAFLKEAYVLEVRDPGVYRVAVCGPGGVWGSSHLVVAVEPGIEA
ALQLDILPAGSGSTAVEIVAGEGSSLELLTVVRPPEAAVHALLVRRLVLEGTQLHSATIALGSAMHRIEEKILLAKSASL
VHRGAGVAAGSQKLDYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSSASFDAEVLILGQHAQGYTMPL
MEIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSETEALELLLAERLRTTAQHLEKLAEKAEKIVGEILLRLS

Sequences:

>Translated_393_residues
MASVGQVERSLDAVKRRARELLDKLPWQHLADSPTIKYYTDWMLFEKQLAAVRRGEDTASEQRRLPEGYDAAVGSCTASS
PANGLRVYRLEEAPRELARIFASMLQVNETRLTAAHYAFLKEAYVLEVRDPGVYRVAVCGPGGVWGSSHLVVAVEPGIEA
ALQLDILPAGSGSTAVEIVAGEGSSLELLTVVRPPEAAVHALLVRRLVLEGTQLHSATIALGSAMHRIEEKILLAKSASL
VHRGAGVAAGSQKLDYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSSASFDAEVLILGQHAQGYTMPL
MEIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSETEALELLLAERLRTTAQHLEKLAEKAEKIVGEILLRLS
>Mature_392_residues
ASVGQVERSLDAVKRRARELLDKLPWQHLADSPTIKYYTDWMLFEKQLAAVRRGEDTASEQRRLPEGYDAAVGSCTASSP
ANGLRVYRLEEAPRELARIFASMLQVNETRLTAAHYAFLKEAYVLEVRDPGVYRVAVCGPGGVWGSSHLVVAVEPGIEAA
LQLDILPAGSGSTAVEIVAGEGSSLELLTVVRPPEAAVHALLVRRLVLEGTQLHSATIALGSAMHRIEEKILLAKSASLV
HRGAGVAAGSQKLDYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSSASFDAEVLILGQHAQGYTMPLM
EIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSETEALELLLAERLRTTAQHLEKLAEKAEKIVGEILLRLS

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42699; Mature: 42568

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVGQVERSLDAVKRRARELLDKLPWQHLADSPTIKYYTDWMLFEKQLAAVRRGEDTAS
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCH
EQRRLPEGYDAAVGSCTASSPANGLRVYRLEEAPRELARIFASMLQVNETRLTAAHYAFL
HHHCCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEAYVLEVRDPGVYRVAVCGPGGVWGSSHLVVAVEPGIEAALQLDILPAGSGSTAVEIVA
HCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEE
GEGSSLELLTVVRPPEAAVHALLVRRLVLEGTQLHSATIALGSAMHRIEEKILLAKSASL
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHRGAGVAAGSQKLDYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSSA
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCC
SFDAEVLILGQHAQGYTMPLMEIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSETEALE
CCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHEEECCCCEEEEHHCCCCHHHHHH
LLLAERLRTTAQHLEKLAEKAEKIVGEILLRLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASVGQVERSLDAVKRRARELLDKLPWQHLADSPTIKYYTDWMLFEKQLAAVRRGEDTAS
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCH
EQRRLPEGYDAAVGSCTASSPANGLRVYRLEEAPRELARIFASMLQVNETRLTAAHYAFL
HHHCCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEAYVLEVRDPGVYRVAVCGPGGVWGSSHLVVAVEPGIEAALQLDILPAGSGSTAVEIVA
HCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEE
GEGSSLELLTVVRPPEAAVHALLVRRLVLEGTQLHSATIALGSAMHRIEEKILLAKSASL
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHRGAGVAAGSQKLDYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSSA
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCC
SFDAEVLILGQHAQGYTMPLMEIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSETEALE
CCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHEEECCCCEEEEHHCCCCHHHHHH
LLLAERLRTTAQHLEKLAEKAEKIVGEILLRLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA