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The map label for this gene is ssnA [H]

Identifier: 124027387

GI number: 124027387

Start: 481380

End: 482582

Strand: Reverse

Name: ssnA [H]

Synonym: Hbut_0500

Alternate gene names: 124027387

Gene position: 482582-481380 (Counterclockwise)

Preceding gene: 124027390

Following gene: 124027386

Centisome position: 28.95

GC content: 53.95

Gene sequence:

>1203_bases
GTGAAGGCTCCGGAGGCTATCGTGCTAAGGCGCTGCCTACTGCTGCGCTGTGCCCGTTGCGGCATTGAGGGCCCAGCCGA
CATAGCCGTGGTAGACGGGTTAATGACTGCTCCCTCGGCTGTAAAGGGCCGTGATGTTGTTGAGGTTGACTGTAAAGAAG
AGCTTGTAGTCGCACCCTGCATGTATGTTGCTAACATGGTTCTAGCTCCGTTGGGCACCGATTACAGCAGCGTGATGCAC
GGAGAACTTGATGATGCACTACTCGAAGCTGCTAGGCTCAGCGGGGAAAGACTAATACAAACTGCAGAAAGGCTAGCAAC
AGAGCTTCCGAGTCTCGGGATGTGTGGAGCCGCCATAGCTACCGTGGACCCGCTCCCAGCTGCCAAAACGCTTCTAGAGC
ATGGATTGAGGGTGCAGACAAACATAGCCTACATCCCCAACTGGAGCCATGTAGAGAGACTTGCCTCCGAGCTTGACAAG
CAATGCAACCAGCTAGGGAACTATGGAGACTTAATGTCTATTGGCATTGAAGTTTTTGCATCAAGGCTTGTCGATGACAA
AGAGCTACAAGAGCTTGTAAGACTGGCACGCAGTAAGAGCATACCTCTATTTATACATGCTTCAACTAGTAAGAGGGATG
TGTATGAGTCTAAGAAGAAGTGGGGGCTCTTCCCCGTTGAGAGGCTAGAGAAGCTAGGCGTGCTAGGCAAGGATACGGTT
ATTGTTGGTGGTGGCTGGGTTTCAAGCTGGGAGTTGGGCTACATAGCTTCCAGGGGCTCAGCAATAGTCCACAACCCGGT
GCATGACATGCTGCATGGGGCTGGCGGCCACTTCCCACTGAGAGAGGCGTTGGATGCTGGTATACGTGTCGGCTTAGGCC
TAGGCCTTGTGGACTCCTTCCTTGATCTCCGCCTAGCCGCTACAGTAGAGTTGCTCCTCCAGCGCTACGTATACTGGGAT
AGCAGGGTCGGCGCCGCCGACGTCTTTTCAGCTGCTAGCGAGGGCTCAGCAAACATACTATCCTTCACAGCAACCGGCAA
GATAGAGCATGGCTCGCCAGGAGATCTCGTGGTCTACCGCGTAAGAGGACTGTCCCAGAGCCTCCTCACAAGAAACCCTG
CCCTTGCACTGCTAGCTGGCGGCAAACCTGTCTACACGATCATTGCCGGGAGAATAGTCCACGCCGAGGAGGATAGTTTT
TGA

Upstream 100 bases:

>100_bases
AATAGACCCACCCCATCTCACGGCATAGGCGTTGGGTAGATGTAGCTGTTACCCCGGCTGTCACCAGTAGTCGTCAATGA
CTCGCCTGGGGCAGAGAGCC

Downstream 100 bases:

>100_bases
AGGGGGTATTGTAAGGTGTATAGCCTAGGTGTTATAGGGCCTTGTCTAAACCGGAAAGCCCCTCCCTAGGCATCAACATG
CTTGGAGCCACTGAGGCTAC

Product: cytosine deaminase

Products: NA

Alternate protein names: MTA/SAH deaminase [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKAPEAIVLRRCLLLRCARCGIEGPADIAVVDGLMTAPSAVKGRDVVEVDCKEELVVAPCMYVANMVLAPLGTDYSSVMH
GELDDALLEAARLSGERLIQTAERLATELPSLGMCGAAIATVDPLPAAKTLLEHGLRVQTNIAYIPNWSHVERLASELDK
QCNQLGNYGDLMSIGIEVFASRLVDDKELQELVRLARSKSIPLFIHASTSKRDVYESKKKWGLFPVERLEKLGVLGKDTV
IVGGGWVSSWELGYIASRGSAIVHNPVHDMLHGAGGHFPLREALDAGIRVGLGLGLVDSFLDLRLAATVELLLQRYVYWD
SRVGAADVFSAASEGSANILSFTATGKIEHGSPGDLVVYRVRGLSQSLLTRNPALALLAGGKPVYTIIAGRIVHAEEDSF

Sequences:

>Translated_400_residues
MKAPEAIVLRRCLLLRCARCGIEGPADIAVVDGLMTAPSAVKGRDVVEVDCKEELVVAPCMYVANMVLAPLGTDYSSVMH
GELDDALLEAARLSGERLIQTAERLATELPSLGMCGAAIATVDPLPAAKTLLEHGLRVQTNIAYIPNWSHVERLASELDK
QCNQLGNYGDLMSIGIEVFASRLVDDKELQELVRLARSKSIPLFIHASTSKRDVYESKKKWGLFPVERLEKLGVLGKDTV
IVGGGWVSSWELGYIASRGSAIVHNPVHDMLHGAGGHFPLREALDAGIRVGLGLGLVDSFLDLRLAATVELLLQRYVYWD
SRVGAADVFSAASEGSANILSFTATGKIEHGSPGDLVVYRVRGLSQSLLTRNPALALLAGGKPVYTIIAGRIVHAEEDSF
>Mature_400_residues
MKAPEAIVLRRCLLLRCARCGIEGPADIAVVDGLMTAPSAVKGRDVVEVDCKEELVVAPCMYVANMVLAPLGTDYSSVMH
GELDDALLEAARLSGERLIQTAERLATELPSLGMCGAAIATVDPLPAAKTLLEHGLRVQTNIAYIPNWSHVERLASELDK
QCNQLGNYGDLMSIGIEVFASRLVDDKELQELVRLARSKSIPLFIHASTSKRDVYESKKKWGLFPVERLEKLGVLGKDTV
IVGGGWVSSWELGYIASRGSAIVHNPVHDMLHGAGGHFPLREALDAGIRVGLGLGLVDSFLDLRLAATVELLLQRYVYWD
SRVGAADVFSAASEGSANILSFTATGKIEHGSPGDLVVYRVRGLSQSLLTRNPALALLAGGKPVYTIIAGRIVHAEEDSF

Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MTA/SAH deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.4.28 [H]

Molecular weight: Translated: 43044; Mature: 43044

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPEAIVLRRCLLLRCARCGIEGPADIAVVDGLMTAPSAVKGRDVVEVDCKEELVVAPC
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH
MYVANMVLAPLGTDYSSVMHGELDDALLEAARLSGERLIQTAERLATELPSLGMCGAAIA
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHH
TVDPLPAAKTLLEHGLRVQTNIAYIPNWSHVERLASELDKQCNQLGNYGDLMSIGIEVFA
HCCCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SRLVDDKELQELVRLARSKSIPLFIHASTSKRDVYESKKKWGLFPVERLEKLGVLGKDTV
HHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCEE
IVGGGWVSSWELGYIASRGSAIVHNPVHDMLHGAGGHFPLREALDAGIRVGLGLGLVDSF
EECCCCCCCCCCEEEECCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLRLAATVELLLQRYVYWDSRVGAADVFSAASEGSANILSFTATGKIEHGSPGDLVVYR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
VRGLSQSLLTRNPALALLAGGKPVYTIIAGRIVHAEEDSF
ECCCHHHHHCCCCCEEEEECCCEEEEEEECEEEECCCCCC
>Mature Secondary Structure
MKAPEAIVLRRCLLLRCARCGIEGPADIAVVDGLMTAPSAVKGRDVVEVDCKEELVVAPC
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH
MYVANMVLAPLGTDYSSVMHGELDDALLEAARLSGERLIQTAERLATELPSLGMCGAAIA
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHH
TVDPLPAAKTLLEHGLRVQTNIAYIPNWSHVERLASELDKQCNQLGNYGDLMSIGIEVFA
HCCCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SRLVDDKELQELVRLARSKSIPLFIHASTSKRDVYESKKKWGLFPVERLEKLGVLGKDTV
HHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCEE
IVGGGWVSSWELGYIASRGSAIVHNPVHDMLHGAGGHFPLREALDAGIRVGLGLGLVDSF
EECCCCCCCCCCEEEECCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLRLAATVELLLQRYVYWDSRVGAADVFSAASEGSANILSFTATGKIEHGSPGDLVVYR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
VRGLSQSLLTRNPALALLAGGKPVYTIIAGRIVHAEEDSF
ECCCHHHHHCCCCCEEEEECCCEEEEEEECEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA