| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is dys [H]
Identifier: 124026943
GI number: 124026943
Start: 32612
End: 33574
Strand: Direct
Name: dys [H]
Synonym: Hbut_0040
Alternate gene names: 124026943
Gene position: 32612-33574 (Clockwise)
Preceding gene: 124026940
Following gene: 124026945
Centisome position: 1.96
GC content: 49.12
Gene sequence:
>963_bases TTGGTACAAAGAGAGGATCTCCTACGTGAACAAGTGACTGATGTCGAGTTGAAGCCTGGAATGACGCTGGACGAGCTAAT AGATGCCTACGGTGAAATATACGGGTTCATGGCTGGTCATTTGAGGAGAGCAATAGAGATTCTATCTAGGTGCCTCCGCG ACGCAGACCTCCGCGTACTATCATTTACAGCTAACATTGTTGCAACCGGGGTTAGGGGTATACTAGCCCAACTAATCCGC GAGAAACTATTCAACCTTGTCGTAACAACTTGTGGCACTATAGATCATGACGTAGCTAGGGGCCTCGGCTATAACTACTA CAAGGGATACTTCGAAGCAGACGACAAGATGCTCAGAGAGCTTGAGATACACAGACTCGGCAATATATACATCCCGGTTG AAAACTATGGCGAGCCAATAGAGAAGTTTACACATAGAGTACTATCAGATCTCGCTGGGAGGAAGAAGAGGTGGGCAGTC TACGAAGTTCTCTGGGAGATGGGTGCAAGAATAAATGATAAACACAGCATCCTACGGGCAGCCTACGAGGCTAAGACACC AGTAATAGTTCCAGGGTTTGTGGATGGAGCTTTTGGGACAGCGGTATTCACGTTTACACAGCTAAACCGTGACTTCGCCA TAGATATAATGCTTGACGAGGAGCTGCTAGCAGACCGCTTCTTCAGAGCCAAGAAGGCAGCAGCGCTGCTCATAGGCGGT GGTATAAGCAAGCACCACTCAATATGGTGGGCTCAGTTCCGCGGCGGATTTGATTGTGCAGTATACGTTACAACAGCTGT AGAGTATGATGGAAGCTTGAGTGGGGCACAGCCACGTGAGGCAATTTCATGGGGTAAGATTAAGCCTAGCGGCGAGCACG TGGTAGTCTATGGTGATGCGACGATATTGCTACCGCTAATAGCCTATGGCCTGCTTAGGTCTCTGAGATGGGGGAGCGGG TAG
Upstream 100 bases:
>100_bases CACCCTTTGCTAGCATCGCCCAGGGTTAGGCTTCTAGCAGCGGGTAAGCCCTAATACTTCCATTAGCCAGACATAGCGCT ACCCGGGGTGGAGTACAAGT
Downstream 100 bases:
>100_bases GCTTAATATCGCTAACCCCTCTTATATAGAGGTAGAGTGTGCGCACAAGCCCGGCAATGTAGTATCTCTCGACGTGTACG GGTTTCCAGCCTGGTATAGC
Product: putative deoxyhypusine synthase
Products: NA
Alternate protein names: DHS [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MVQREDLLREQVTDVELKPGMTLDELIDAYGEIYGFMAGHLRRAIEILSRCLRDADLRVLSFTANIVATGVRGILAQLIR EKLFNLVVTTCGTIDHDVARGLGYNYYKGYFEADDKMLRELEIHRLGNIYIPVENYGEPIEKFTHRVLSDLAGRKKRWAV YEVLWEMGARINDKHSILRAAYEAKTPVIVPGFVDGAFGTAVFTFTQLNRDFAIDIMLDEELLADRFFRAKKAAALLIGG GISKHHSIWWAQFRGGFDCAVYVTTAVEYDGSLSGAQPREAISWGKIKPSGEHVVVYGDATILLPLIAYGLLRSLRWGSG
Sequences:
>Translated_320_residues MVQREDLLREQVTDVELKPGMTLDELIDAYGEIYGFMAGHLRRAIEILSRCLRDADLRVLSFTANIVATGVRGILAQLIR EKLFNLVVTTCGTIDHDVARGLGYNYYKGYFEADDKMLRELEIHRLGNIYIPVENYGEPIEKFTHRVLSDLAGRKKRWAV YEVLWEMGARINDKHSILRAAYEAKTPVIVPGFVDGAFGTAVFTFTQLNRDFAIDIMLDEELLADRFFRAKKAAALLIGG GISKHHSIWWAQFRGGFDCAVYVTTAVEYDGSLSGAQPREAISWGKIKPSGEHVVVYGDATILLPLIAYGLLRSLRWGSG >Mature_320_residues MVQREDLLREQVTDVELKPGMTLDELIDAYGEIYGFMAGHLRRAIEILSRCLRDADLRVLSFTANIVATGVRGILAQLIR EKLFNLVVTTCGTIDHDVARGLGYNYYKGYFEADDKMLRELEIHRLGNIYIPVENYGEPIEKFTHRVLSDLAGRKKRWAV YEVLWEMGARINDKHSILRAAYEAKTPVIVPGFVDGAFGTAVFTFTQLNRDFAIDIMLDEELLADRFFRAKKAAALLIGG GISKHHSIWWAQFRGGFDCAVYVTTAVEYDGSLSGAQPREAISWGKIKPSGEHVVVYGDATILLPLIAYGLLRSLRWGSG
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503325, Length=324, Percent_Identity=30.5555555555556, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI7108338, Length=324, Percent_Identity=25.3086419753086, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI7108340, Length=234, Percent_Identity=25.2136752136752, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536927, Length=317, Percent_Identity=31.2302839116719, Blast_Score=157, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6321859, Length=276, Percent_Identity=31.8840579710145, Blast_Score=151, Evalue=1e-37, Organism=Drosophila melanogaster, GI45550569, Length=337, Percent_Identity=30.2670623145401, Blast_Score=157, Evalue=7e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 - InterPro: IPR022899 [H]
Pfam domain/function: PF01916 DS [H]
EC number: =2.5.1.46 [H]
Molecular weight: Translated: 35937; Mature: 35937
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQREDLLREQVTDVELKPGMTLDELIDAYGEIYGFMAGHLRRAIEILSRCLRDADLRVL CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE SFTANIVATGVRGILAQLIREKLFNLVVTTCGTIDHDVARGLGYNYYKGYFEADDKMLRE EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCEEHHHHHHHHH LEIHRLGNIYIPVENYGEPIEKFTHRVLSDLAGRKKRWAVYEVLWEMGARINDKHSILRA HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH AYEAKTPVIVPGFVDGAFGTAVFTFTQLNRDFAIDIMLDEELLADRFFRAKKAAALLIGG HHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHEEEEEC GISKHHSIWWAQFRGGFDCAVYVTTAVEYDGSLSGAQPREAISWGKIKPSGEHVVVYGDA CCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEECH TILLPLIAYGLLRSLRWGSG HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVQREDLLREQVTDVELKPGMTLDELIDAYGEIYGFMAGHLRRAIEILSRCLRDADLRVL CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE SFTANIVATGVRGILAQLIREKLFNLVVTTCGTIDHDVARGLGYNYYKGYFEADDKMLRE EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCEEHHHHHHHHH LEIHRLGNIYIPVENYGEPIEKFTHRVLSDLAGRKKRWAVYEVLWEMGARINDKHSILRA HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH AYEAKTPVIVPGFVDGAFGTAVFTFTQLNRDFAIDIMLDEELLADRFFRAKKAAALLIGG HHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHEEEEEC GISKHHSIWWAQFRGGFDCAVYVTTAVEYDGSLSGAQPREAISWGKIKPSGEHVVVYGDA CCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEECH TILLPLIAYGLLRSLRWGSG HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA