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The map label for this gene is pqqE [H]

Identifier: 124026940

GI number: 124026940

Start: 29847

End: 31034

Strand: Direct

Name: pqqE [H]

Synonym: Hbut_0037

Alternate gene names: 124026940

Gene position: 29847-31034 (Clockwise)

Preceding gene: 124026939

Following gene: 124026943

Centisome position: 1.79

GC content: 50.51

Gene sequence:

>1188_bases
ATGATACCCGTCACAGTGCTCGTAGGAGGTAAAGCCGCGGTTTCACGCAGGATTAAGGGAGACTATAGCGTCTCAAAACC
CCCGAGGTTCTCGGAGCTACTCAGGCCAATAGTCTTCTGGAACATCACCTACCAGTGCAACCTACAGTGTGTACATTGCT
ACATAAAAGCACTAGCTAAGCGCAATCCCAACGAGCTAACTACTGAAGAGGCTAAGCGTGTAGCGGAGGAGATAGTCGAG
ATTGGTATCCCACTAGTCGTTTTCAGCGGCGGCGAGCCTCTAGTGAGAAGTGACTTCTGGGAGATAGTAGAACCTATGGC
TGGTAAGCAGAGACCGAAACTGTCGTTGAGCACTAATGGCACATTAATAACGAGGGATGTTGCAGAGAAGCTTGCGTCAT
ACCAGTTCAAGTATGTGGGTATATCTATTGATAGCATAAAGCCGGAGTGGCATGACAGGTTTAGGGGAGTACCCGGCGCA
TTTGAAGCTGCGGTACGTGGCATAAAATATGTTATGGAGCTAGGTATAGATGTTGGCGTGCGCACCACGCTTACCAAGTA
CAATATTGAGGAGGTACCAGCAATACTCAAGTGGGCCTACGATCTCGGCATAAAACGTGTAAGCCTCTACGTCCTAGATA
CCGTGGGTCGAGGAGCAGGTATTGCAGACTGGCTTCCCACCCATGAGCAGCTCCGCAAATTCGCAGATACAATAATAGAT
GAAGCACGCAAGTACTCGGGCGAAATGGAGATATTAATCGTCAGAGCGCAGTTCCTAGGAATCTACATTGCCGACAAGCT
TGCTCGCTCTCCCGAGGACTTCATGAAGTACATATCGCTGCTTGATGCGCAGGGCAACTGCGGCAGGAAAAGCATAAGCA
TATACCCGAATGGCGATGTTAAGCCATGCCAGTTCGTAGACTGGGTAACCCTCGGCAACGTTCGGAGACAGACGCTAAAG
GATATACTTAGCCCTGAGAACAAAGAGTTAAAGCCATTCCTAGCCATAGAGAACTACTTACGCGGCCCAAGGTGTGGCAG
GTGTCCATTCCGGAGGATATGCGGGGGTGGCAGTAGGGGCAGGGCACTAGAGCTAACCGGCGACGAGTGGGGAGACGACC
CGCTATGCTTCATAGACTTCTCCGCGATAGCTAAGAAGTGGGGCATAGATCCCAATAAGATCCTCTAG

Upstream 100 bases:

>100_bases
TTATCGATAGGCTGTATAGGCTAGACCTCGTAGACGATGTTCTTAAGCTTCCAAGCATACGCGACCTAGCACCCGGCCTT
GTAAGGTGAGGGTGAACGGA

Downstream 100 bases:

>100_bases
TGCTCTCTGCAAGGCCTACTAACACCCTTCCTTTTAGCCAGTTCAACAAGTATCGGTATCTCCTTCAGCTTCTCGCAAGG
TAAGAGCTCCCAAATCACAC

Product: Fe-S oxidoreductase - metallo cofactor biosynthesis protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MIPVTVLVGGKAAVSRRIKGDYSVSKPPRFSELLRPIVFWNITYQCNLQCVHCYIKALAKRNPNELTTEEAKRVAEEIVE
IGIPLVVFSGGEPLVRSDFWEIVEPMAGKQRPKLSLSTNGTLITRDVAEKLASYQFKYVGISIDSIKPEWHDRFRGVPGA
FEAAVRGIKYVMELGIDVGVRTTLTKYNIEEVPAILKWAYDLGIKRVSLYVLDTVGRGAGIADWLPTHEQLRKFADTIID
EARKYSGEMEILIVRAQFLGIYIADKLARSPEDFMKYISLLDAQGNCGRKSISIYPNGDVKPCQFVDWVTLGNVRRQTLK
DILSPENKELKPFLAIENYLRGPRCGRCPFRRICGGGSRGRALELTGDEWGDDPLCFIDFSAIAKKWGIDPNKIL

Sequences:

>Translated_395_residues
MIPVTVLVGGKAAVSRRIKGDYSVSKPPRFSELLRPIVFWNITYQCNLQCVHCYIKALAKRNPNELTTEEAKRVAEEIVE
IGIPLVVFSGGEPLVRSDFWEIVEPMAGKQRPKLSLSTNGTLITRDVAEKLASYQFKYVGISIDSIKPEWHDRFRGVPGA
FEAAVRGIKYVMELGIDVGVRTTLTKYNIEEVPAILKWAYDLGIKRVSLYVLDTVGRGAGIADWLPTHEQLRKFADTIID
EARKYSGEMEILIVRAQFLGIYIADKLARSPEDFMKYISLLDAQGNCGRKSISIYPNGDVKPCQFVDWVTLGNVRRQTLK
DILSPENKELKPFLAIENYLRGPRCGRCPFRRICGGGSRGRALELTGDEWGDDPLCFIDFSAIAKKWGIDPNKIL
>Mature_395_residues
MIPVTVLVGGKAAVSRRIKGDYSVSKPPRFSELLRPIVFWNITYQCNLQCVHCYIKALAKRNPNELTTEEAKRVAEEIVE
IGIPLVVFSGGEPLVRSDFWEIVEPMAGKQRPKLSLSTNGTLITRDVAEKLASYQFKYVGISIDSIKPEWHDRFRGVPGA
FEAAVRGIKYVMELGIDVGVRTTLTKYNIEEVPAILKWAYDLGIKRVSLYVLDTVGRGAGIADWLPTHEQLRKFADTIID
EARKYSGEMEILIVRAQFLGIYIADKLARSPEDFMKYISLLDAQGNCGRKSISIYPNGDVKPCQFVDWVTLGNVRRQTLK
DILSPENKELKPFLAIENYLRGPRCGRCPFRRICGGGSRGRALELTGDEWGDDPLCFIDFSAIAKKWGIDPNKIL

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44420; Mature: 44420

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVTVLVGGKAAVSRRIKGDYSVSKPPRFSELLRPIVFWNITYQCNLQCVHCYIKALAK
CCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEEEECHHHHHHHHHHHHC
RNPNELTTEEAKRVAEEIVEIGIPLVVFSGGEPLVRSDFWEIVEPMAGKQRPKLSLSTNG
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
TLITRDVAEKLASYQFKYVGISIDSIKPEWHDRFRGVPGAFEAAVRGIKYVMELGIDVGV
EEEEHHHHHHHHHCEEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
RTTLTKYNIEEVPAILKWAYDLGIKRVSLYVLDTVGRGAGIADWLPTHEQLRKFADTIID
CCEEECCCHHHHHHHHHHHHHHCHHHEEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHH
EARKYSGEMEILIVRAQFLGIYIADKLARSPEDFMKYISLLDAQGNCGRKSISIYPNGDV
HHHHHCCCEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
KPCQFVDWVTLGNVRRQTLKDILSPENKELKPFLAIENYLRGPRCGRCPFRRICGGGSRG
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
RALELTGDEWGDDPLCFIDFSAIAKKWGIDPNKIL
CEEEECCCCCCCCCEEEEEHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MIPVTVLVGGKAAVSRRIKGDYSVSKPPRFSELLRPIVFWNITYQCNLQCVHCYIKALAK
CCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEEEECHHHHHHHHHHHHC
RNPNELTTEEAKRVAEEIVEIGIPLVVFSGGEPLVRSDFWEIVEPMAGKQRPKLSLSTNG
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
TLITRDVAEKLASYQFKYVGISIDSIKPEWHDRFRGVPGAFEAAVRGIKYVMELGIDVGV
EEEEHHHHHHHHHCEEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
RTTLTKYNIEEVPAILKWAYDLGIKRVSLYVLDTVGRGAGIADWLPTHEQLRKFADTIID
CCEEECCCHHHHHHHHHHHHHHCHHHEEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHH
EARKYSGEMEILIVRAQFLGIYIADKLARSPEDFMKYISLLDAQGNCGRKSISIYPNGDV
HHHHHCCCEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
KPCQFVDWVTLGNVRRQTLKDILSPENKELKPFLAIENYLRGPRCGRCPFRRICGGGSRG
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
RALELTGDEWGDDPLCFIDFSAIAKKWGIDPNKIL
CEEEECCCCCCCCCEEEEEHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]