Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026890

Identifier: 124026890

GI number: 124026890

Start: 1845347

End: 1846459

Strand: Direct

Name: 124026890

Synonym: NATL1_21851

Alternate gene names: NA

Gene position: 1845347-1846459 (Clockwise)

Preceding gene: 124026887

Following gene: 124026892

Centisome position: 98.96

GC content: 29.92

Gene sequence:

>1113_bases
ATGCAAATGAATAGCCAAAAAACAGAAAAAAAACACACCGAAATCTCAATTGTTGGAGGTGGGATAGCAGGAATTACAAC
TGCCTTTCATTTAGGGAAAAAAGGTTATCAAATAAATTTAATCGACCCAACATTAAATTCAGAAATAAATAATTTAAATC
CAAAAAATGGAACACAAGCTAGTTTGGGTGTTCTCATGGGAAATATCTACAAAAGATCAAAAGGAAGAGCTTTTTTACTA
AGAAAAAAAAGTATGAAATTATGGAAAGAATGGCTTACACAAATAAACTATTCTGAGACAGATTTGATTCTTGAAAAACC
ATTAATTAAATTAGCAAGTTCAGACAAAGAGTATCAATCAATGATTGAATTAAGTCATAATAAAAAAACTTATGGAATTG
AACTTTTAGATCAAAATTCTTTAGATTTCTGGAATTCTATATTTGAGACAAGATTAATAGGGGGATTAATATCTCATGAA
GATGGTCGATTAAATCCAATAAAGTTAATCAAGTCATTAATGGAAAGTCTTGATCAAATCAAGATAAATAAAATCGAGAA
AAGTGTTATTAGAATAAGTAAAAATAATAATTTAAATGATAAAAGCTGGACTATTAATCTTGAAAATAATCAATCTATTA
ATCAAGATTATATCATCATTTGTTCTGCATTAAATACTCAAAATTTATTAAAACCATTAGGTCATGAAATACTTTTAGAA
CCAATATTAGGACAAGTTATTGAATTAGAATTAAAAAAAGAAACTCCGAATTGGAAAGAATGGCCTGCAATATTAAATTA
TCAATCTATAAACTTTATACACCATGATCCCAATCGCATGCTTATAGGAGCAACTGTCGAAAAAGGAACTAAACCAAGCC
AATTAGATAAACAAAAAATGCTGAACCTGAGAAACGGTTCTCCAAAATGGATGCTCAATGCAAAAGTCTGTCATGAATGG
AGCGGAATAAGAGCTAGACCAACTAATGAAGCAGCTCCCTTATTAAAACAACTAGAACCAGGTCTATTAATTAATACAGG
TCACTACAGAAATGGTGTTTTATTAGCTCCTGCTTGCGCCGAATGGATAGGACTTCAAATTGAGGGCCAATAA

Upstream 100 bases:

>100_bases
TGCAAAATAACTGTTTTGATGCTCACTATAGCTATATCCTTAAACTATTCTCTTTTTTAGACCACACATTGAAAATTAAC
AAGCAAATTTCATAGCATCT

Downstream 100 bases:

>100_bases
ATATTAATTAATCTACTTATTTATTTTGTCTCTGTAAAGTCAGCATCAATAACATCATCTCCATCAACTTTACTGTCAGT
ATTAGAATCTGCCGCGGCTT

Product: NAD binding site:D-amino acid oxidase

Products: NA

Alternate protein names: D-Amino Acid Oxidase; Glycine/D-Amino Acid Oxidases; FAD-Dependent Oxidoreductase; Glycine/D-Amino Acid Oxidase

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQASLGVLMGNIYKRSKGRAFLL
RKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQSMIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHE
DGRLNPIKLIKSLMESLDQIKINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE
PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKMLNLRNGSPKWMLNAKVCHEW
SGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACAEWIGLQIEGQ

Sequences:

>Translated_370_residues
MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQASLGVLMGNIYKRSKGRAFLL
RKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQSMIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHE
DGRLNPIKLIKSLMESLDQIKINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE
PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKMLNLRNGSPKWMLNAKVCHEW
SGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACAEWIGLQIEGQ
>Mature_370_residues
MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQASLGVLMGNIYKRSKGRAFLL
RKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQSMIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHE
DGRLNPIKLIKSLMESLDQIKINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE
PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKMLNLRNGSPKWMLNAKVCHEW
SGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACAEWIGLQIEGQ

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41970; Mature: 41970

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQA
CCCCCCHHHHHCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHH
SLGVLMGNIYKRSKGRAFLLRKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQS
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
MIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHEDGRLNPIKLIKSLMESLDQI
HHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE
HHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKM
HHHHHHEEEEEECCCCCHHHCCHHCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHH
LNLRNGSPKWMLNAKVCHEWSGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACA
HHCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEECCCHH
EWIGLQIEGQ
HHCCCEEECC
>Mature Secondary Structure
MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQA
CCCCCCHHHHHCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHH
SLGVLMGNIYKRSKGRAFLLRKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQS
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
MIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHEDGRLNPIKLIKSLMESLDQI
HHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE
HHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKM
HHHHHHEEEEEECCCCCHHHCCHHCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHH
LNLRNGSPKWMLNAKVCHEWSGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACA
HHCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEECCCHH
EWIGLQIEGQ
HHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA