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The map label for this gene is atpH

Identifier: 124026555

GI number: 124026555

Start: 1512766

End: 1513314

Strand: Reverse

Name: atpH

Synonym: NATL1_18501

Alternate gene names: 124026555

Gene position: 1513314-1512766 (Counterclockwise)

Preceding gene: 124026556

Following gene: 124026554

Centisome position: 81.15

GC content: 38.62

Gene sequence:

>549_bases
ATGCCACTACTTAATACAATCACTACTCCATATGCTGAAGCGTTCCTTCAAGTAGCAGAGAGCCGCAACGAGGTGGATGA
AGTAGTTACTCAAGCTAAGTCTATTTTAGAACTTTGGAATTCTTGCCCTGAATTTAGTGATGCGATGTCATCACCAGTTT
TAGAAGTTAATCAAAAGAAAGCCGCTTTAGAGAAGCTTTTCTCTAGTCAAGTCACTCCATCTTTCTTAAATCTTTTAAAA
CTTTTGGCAGATCGACAAAGAATTGGATTGTTGAATTCTGTTCTTGAAAGATTATTAGAAATCTATCGAGAACAAAGAAA
TATTGCTCTAGCAACTATTACTTCTGCTTCAGCGCTAAATGAAGATCAACAATCTGAGCTACTCAAGAAAGTACAATCTA
TAGCTGGTACAGATAATTTGGAAATCGATCTCAAAGTCGACTCCGAATTACTTGGTGGCTTTGTGGTCAATGTTGGATCA
AAGGTCATTGATGCCAGCATCGCAGGGCAAGTCAGAAGACTTGGTCTTGCTTTGGCCAAAGTCAGCTAA

Upstream 100 bases:

>100_bases
TTGCTATTGAAAAAGCATTAGCAATGCTTCCAAAAAAGTTAGATTCAAATACTCAAGATAATTTTCTTAAACAGTCAATT
AAAAATATTGGAGACAACTA

Downstream 100 bases:

>100_bases
TTCTCTCCTGACTTTCTCCTCCCTTCTTCCTCTTTTTCTTCTTCCCCAACTTTAAGTTAATCCCATGGTTTCTATACGTC
CCGACGAGATCAGTTCAATC

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPLLNTITTPYAEAFLQVAESRNEVDEVVTQAKSILELWNSCPEFSDAMSSPVLEVNQKKAALEKLFSSQVTPSFLNLLK
LLADRQRIGLLNSVLERLLEIYREQRNIALATITSASALNEDQQSELLKKVQSIAGTDNLEIDLKVDSELLGGFVVNVGS
KVIDASIAGQVRRLGLALAKVS

Sequences:

>Translated_182_residues
MPLLNTITTPYAEAFLQVAESRNEVDEVVTQAKSILELWNSCPEFSDAMSSPVLEVNQKKAALEKLFSSQVTPSFLNLLK
LLADRQRIGLLNSVLERLLEIYREQRNIALATITSASALNEDQQSELLKKVQSIAGTDNLEIDLKVDSELLGGFVVNVGS
KVIDASIAGQVRRLGLALAKVS
>Mature_181_residues
PLLNTITTPYAEAFLQVAESRNEVDEVVTQAKSILELWNSCPEFSDAMSSPVLEVNQKKAALEKLFSSQVTPSFLNLLKL
LADRQRIGLLNSVLERLLEIYREQRNIALATITSASALNEDQQSELLKKVQSIAGTDNLEIDLKVDSELLGGFVVNVGSK
VIDASIAGQVRRLGLALAKVS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Caenorhabditis elegans, GI71984717, Length=171, Percent_Identity=29.8245614035088, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71984710, Length=171, Percent_Identity=29.8245614035088, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24647054, Length=169, Percent_Identity=28.9940828402367, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_PROM1 (A2C4J6)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001015670.1
- ProteinModelPortal:   A2C4J6
- STRING:   A2C4J6
- GeneID:   4779731
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_18501
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   MSTNAIA
- ProtClustDB:   PRK13429
- BioCyc:   PMAR167555:NATL1_18501-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19912; Mature: 19781

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLNTITTPYAEAFLQVAESRNEVDEVVTQAKSILELWNSCPEFSDAMSSPVLEVNQKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH
AALEKLFSSQVTPSFLNLLKLLADRQRIGLLNSVLERLLEIYREQRNIALATITSASALN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHCC
EDQQSELLKKVQSIAGTDNLEIDLKVDSELLGGFVVNVGSKVIDASIAGQVRRLGLALAK
HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VS
CC
>Mature Secondary Structure 
PLLNTITTPYAEAFLQVAESRNEVDEVVTQAKSILELWNSCPEFSDAMSSPVLEVNQKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH
AALEKLFSSQVTPSFLNLLKLLADRQRIGLLNSVLERLLEIYREQRNIALATITSASALN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHCC
EDQQSELLKKVQSIAGTDNLEIDLKVDSELLGGFVVNVGSKVIDASIAGQVRRLGLALAK
HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA