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The map label for this gene is atpF

Identifier: 124026556

GI number: 124026556

Start: 1513314

End: 1513826

Strand: Reverse

Name: atpF

Synonym: NATL1_18511

Alternate gene names: 124026556

Gene position: 1513826-1513314 (Counterclockwise)

Preceding gene: 124026557

Following gene: 124026555

Centisome position: 81.18

GC content: 35.67

Gene sequence:

>513_bases
ATGACTCCTTTAATTTTCGCTTCCGAAGGCTTTGGCCTTAATTTAAATATTTTTGAGACCAACATTATCAACTTAGCCGT
TGTTGTCTTTGGCCTCTACAAGTTCTTACCAGGCTTTTTAGGAAAAATCCTTGAAAAGAGGAGAACTACAATTCTTTCTG
ACTTGAAAGAAGCAGAAGAGCGTTTAGCACAAGCACAAGATTCTCTTTCACAAGCAAAAGATGATCTTTCATCAGCTAAG
CAAAAAGCTGACAAAATCAGAAATGATTGCAAAGTTAGAGCAGAAGCAATTCGTCTTGAGAGTGAAAAAAGAACTGTTGA
AGAAATGGCAAGAATTAAACAAGGAGCTGCTTCTGACTTAAGTGCTGAAGCTGCAAGGGTGACTTCCCAATTAAGAAAAG
AGGCTGCAGAACTTGCTATTGAAAAAGCATTAGCAATGCTTCCAAAAAAGTTAGATTCAAATACTCAAGATAATTTTCTT
AAACAGTCAATTAAAAATATTGGAGACAACTAA

Upstream 100 bases:

>100_bases
GGCGTGAGATTGATTCACAAAGAGATGAAGCTCTTAATCAACTCAAAAGCGAGGCTGACAATCTTGGTGATTTGATTATT
GAAAGACTCTTGGCAAAAAA

Downstream 100 bases:

>100_bases
TGCCACTACTTAATACAATCACTACTCCATATGCTGAAGCGTTCCTTCAAGTAGCAGAGAGCCGCAACGAGGTGGATGAA
GTAGTTACTCAAGCTAAGTC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTPLIFASEGFGLNLNIFETNIINLAVVVFGLYKFLPGFLGKILEKRRTTILSDLKEAEERLAQAQDSLSQAKDDLSSAK
QKADKIRNDCKVRAEAIRLESEKRTVEEMARIKQGAASDLSAEAARVTSQLRKEAAELAIEKALAMLPKKLDSNTQDNFL
KQSIKNIGDN

Sequences:

>Translated_170_residues
MTPLIFASEGFGLNLNIFETNIINLAVVVFGLYKFLPGFLGKILEKRRTTILSDLKEAEERLAQAQDSLSQAKDDLSSAK
QKADKIRNDCKVRAEAIRLESEKRTVEEMARIKQGAASDLSAEAARVTSQLRKEAAELAIEKALAMLPKKLDSNTQDNFL
KQSIKNIGDN
>Mature_169_residues
TPLIFASEGFGLNLNIFETNIINLAVVVFGLYKFLPGFLGKILEKRRTTILSDLKEAEERLAQAQDSLSQAKDDLSSAKQ
KADKIRNDCKVRAEAIRLESEKRTVEEMARIKQGAASDLSAEAARVTSQLRKEAAELAIEKALAMLPKKLDSNTQDNFLK
QSIKNIGDN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PROM1 (A2C4J7)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001015671.1
- STRING:   A2C4J7
- GeneID:   4779727
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_18511
- eggNOG:   COG0711
- HOGENOM:   HBG708990
- OMA:   ESIRMES
- ProtClustDB:   PRK07352
- BioCyc:   PMAR167555:NATL1_18511-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18854; Mature: 18723

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21da2c50)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLIFASEGFGLNLNIFETNIINLAVVVFGLYKFLPGFLGKILEKRRTTILSDLKEAEE
CCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAQAQDSLSQAKDDLSSAKQKADKIRNDCKVRAEAIRLESEKRTVEEMARIKQGAASDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SAEAARVTSQLRKEAAELAIEKALAMLPKKLDSNTQDNFLKQSIKNIGDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH
>Mature Secondary Structure 
TPLIFASEGFGLNLNIFETNIINLAVVVFGLYKFLPGFLGKILEKRRTTILSDLKEAEE
CCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAQAQDSLSQAKDDLSSAKQKADKIRNDCKVRAEAIRLESEKRTVEEMARIKQGAASDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SAEAARVTSQLRKEAAELAIEKALAMLPKKLDSNTQDNFLKQSIKNIGDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA