Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026378

Identifier: 124026378

GI number: 124026378

Start: 1364415

End: 1364996

Strand: Direct

Name: 124026378

Synonym: NATL1_16721

Alternate gene names: NA

Gene position: 1364415-1364996 (Clockwise)

Preceding gene: 124026377

Following gene: 124026379

Centisome position: 73.17

GC content: 31.44

Gene sequence:

>582_bases
ATGTGGAGAGGTTATTTCAAAAAAGCAACTAATATGACTTTTATAGATATCGATGAAAGTTGTCTAAGATTTGAAGAAAG
TGAAATAAATATTTTAATTGGTGATCAATCAGACAAATCTTTTCTCAATAAAGTTATTGAAAATCACGGACCTTTTGATG
TGATCATAGATGACGGTAGTCATCTATGTAATGATCAAATCACTTCATTTAAATCCCTTTGGCCTGCAATCAAAGATAAT
GGAATTTACTTAGTAGAAGACACACATACAAGTTATTGGCCAGGATTTGGAGGAGGATATAGGAATGAAGCTAGCTTTAT
TGAATTCTCAAAAAGAATAGTGGATAGAATGCATACTTGGTGGACTGATCAAGATGAATTATTTCCTTATAATCAGCAAC
CTATAAATATAAACAGTGTGAGATTTTATGACTCAATTATTGCATTTACGAAGAAAGAAAATAGAACACACCCATTTAAT
ATTACTTCTGTTAATGGAAAAATCTCAAAAGACAGGCGGGCATTTGGACTTAGAGAACGGGAGTCACTTTTTGACAAAGA
TTCTAAATTTCATCAAAACTAA

Upstream 100 bases:

>100_bases
GTCACAATATTTTGAAACTTATGACAAAGAGTTATCTTATCTGAGAGATAAACCTATCTCCTTCCTAGAGATAGGAGTCT
ACCAAGGTGGTTCAATACCT

Downstream 100 bases:

>100_bases
AATTATTTATACATAGAATATAAAACTAGATTCAATCAAAATTATGTATATATAAAAAAATCATGAAGCTTATAATAAAT
CTCAAAATTAATGATCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGSHLCNDQITSFKSLWPAIKDN
GIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTWWTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFN
ITSVNGKISKDRRAFGLRERESLFDKDSKFHQN

Sequences:

>Translated_193_residues
MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGSHLCNDQITSFKSLWPAIKDN
GIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTWWTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFN
ITSVNGKISKDRRAFGLRERESLFDKDSKFHQN
>Mature_193_residues
MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGSHLCNDQITSFKSLWPAIKDN
GIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTWWTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFN
ITSVNGKISKDRRAFGLRERESLFDKDSKFHQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22696; Mature: 22696

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGS
CCCCHHHHCCCCEEEECCHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC
HLCNDQITSFKSLWPAIKDNGIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTW
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
WTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFNITSVNGKISKDRRAFGLRER
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCCHHH
ESLFDKDSKFHQN
HHHHCCCHHCCCC
>Mature Secondary Structure
MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGS
CCCCHHHHCCCCEEEECCHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC
HLCNDQITSFKSLWPAIKDNGIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTW
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
WTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFNITSVNGKISKDRRAFGLRER
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCCHHH
ESLFDKDSKFHQN
HHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA