| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026347
Identifier: 124026347
GI number: 124026347
Start: 1339903
End: 1340070
Strand: Reverse
Name: 124026347
Synonym: NATL1_16411
Alternate gene names: NA
Gene position: 1340070-1339903 (Counterclockwise)
Preceding gene: 124026348
Following gene: 124026345
Centisome position: 71.86
GC content: 35.71
Gene sequence:
>168_bases ATGGCAGGCGGACCATTATTACAACTTTGGGAAAACCTACTACCCTTTGCTAAGGATCTAAGAATTCGCTTTGCAATAGC AATGCTTGGTAATGTTCTCGCAATATTATTTATTTTTAGCCTATGTAAAATGTTTATTCCAGGATTGGAAGAGCAACTAT TTAGTTGA
Upstream 100 bases:
>100_bases AGAAGATATTAATAGAATCTTTTTGCTTTAAATCTGTGTTCTCATGTAGCCAATAAGGTAGTCCCACTGTAAGCTATTAG TAATTAAACATTAATATCCA
Downstream 100 bases:
>100_bases TTTCCTAGACCAGAATTGATACATTTCTCTAAAAGATTTAGGATTTAATTTTTCAAATTTATCCCATAATTCTAAATTTT TTAAAGAGTCTTTATCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MAGGPLLQLWENLLPFAKDLRIRFAIAMLGNVLAILFIFSLCKMFIPGLEEQLFS
Sequences:
>Translated_55_residues MAGGPLLQLWENLLPFAKDLRIRFAIAMLGNVLAILFIFSLCKMFIPGLEEQLFS >Mature_54_residues AGGPLLQLWENLLPFAKDLRIRFAIAMLGNVLAILFIFSLCKMFIPGLEEQLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6212; Mature: 6080
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGPLLQLWENLLPFAKDLRIRFAIAMLGNVLAILFIFSLCKMFIPGLEEQLFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure AGGPLLQLWENLLPFAKDLRIRFAIAMLGNVLAILFIFSLCKMFIPGLEEQLFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA