| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is bcp [H]
Identifier: 124026345
GI number: 124026345
Start: 1336922
End: 1337377
Strand: Reverse
Name: bcp [H]
Synonym: NATL1_16391
Alternate gene names: 124026345
Gene position: 1337377-1336922 (Counterclockwise)
Preceding gene: 124026347
Following gene: 124026342
Centisome position: 71.72
GC content: 36.62
Gene sequence:
>456_bases ATGCCTTTAAAGTTAGGTGATCAAATACCTGATTTCTCACTCTCTGATCAACTAGGTGTTTCTAGGACGAATAAACAAGC AAAAGGTAGGCCACTAGTTTTATTTTTTTATCCCAAAGACGATACGCCTGGTTGTACAGCTGAAAATTGCGGCTTTAGAG ACAAATACGATCTTTTTAAACTATTTGGGGCTGAAGTTTGGGGGGTAAGTGGTGATGATGAAGCAAGTCATAGATCTTTT GCAGACAAAAATAAGCTTCCATTTCCATTATTGTGTGACACAGAAAATTCTTTGAGAAGAGCGTTTGGAGTTCCTAAAGT TCTTGGCTTACTTGATGGTCGAGTAACTTACATTATTGATTCAAAAGGTGTTATTAGGCATATTTTCAATGATCTTTTAA ATGGTCCTGCTCATGTGAATGAGGCACTTAGAGTATTAGGCGAGATAAGAAATTAA
Upstream 100 bases:
>100_bases TTATTTATAGATTATGGAGTTAATACACTTTTATTAATGCTTATTCCCTCCAATAAGCCCTGATTTTTTATATAATGTTT TTATATATTTTAGGATGCAA
Downstream 100 bases:
>100_bases CTTTTAAAATTGTTGATTATTTTTTTTCTTAGTAATTATCTAAAAAATAATCAAGACATTAATTTACTGCTAGCTTCTTT TGCTTGTAGTTTTTCTACTA
Product: peroxiredoxin
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPLKLGDQIPDFSLSDQLGVSRTNKQAKGRPLVLFFYPKDDTPGCTAENCGFRDKYDLFKLFGAEVWGVSGDDEASHRSF ADKNKLPFPLLCDTENSLRRAFGVPKVLGLLDGRVTYIIDSKGVIRHIFNDLLNGPAHVNEALRVLGEIRN
Sequences:
>Translated_151_residues MPLKLGDQIPDFSLSDQLGVSRTNKQAKGRPLVLFFYPKDDTPGCTAENCGFRDKYDLFKLFGAEVWGVSGDDEASHRSF ADKNKLPFPLLCDTENSLRRAFGVPKVLGLLDGRVTYIIDSKGVIRHIFNDLLNGPAHVNEALRVLGEIRN >Mature_150_residues PLKLGDQIPDFSLSDQLGVSRTNKQAKGRPLVLFFYPKDDTPGCTAENCGFRDKYDLFKLFGAEVWGVSGDDEASHRSFA DKNKLPFPLLCDTENSLRRAFGVPKVLGLLDGRVTYIIDSKGVIRHIFNDLLNGPAHVNEALRVLGEIRN
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=154, Percent_Identity=35.7142857142857, Blast_Score=70, Evalue=5e-13, Organism=Homo sapiens, GI4505591, Length=147, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI32455266, Length=147, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI32455264, Length=147, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=38.4615384615385, Blast_Score=97, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17554494, Length=132, Percent_Identity=34.8484848484849, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=129, Percent_Identity=38.7596899224806, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16808; Mature: 16677
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKLGDQIPDFSLSDQLGVSRTNKQAKGRPLVLFFYPKDDTPGCTAENCGFRDKYDLFK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH LFGAEVWGVSGDDEASHRSFADKNKLPFPLLCDTENSLRRAFGVPKVLGLLDGRVTYIID HHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHCCEEEEEEC SKGVIRHIFNDLLNGPAHVNEALRVLGEIRN CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PLKLGDQIPDFSLSDQLGVSRTNKQAKGRPLVLFFYPKDDTPGCTAENCGFRDKYDLFK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH LFGAEVWGVSGDDEASHRSFADKNKLPFPLLCDTENSLRRAFGVPKVLGLLDGRVTYIID HHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHCCEEEEEEC SKGVIRHIFNDLLNGPAHVNEALRVLGEIRN CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]