| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is mhpC [H]
Identifier: 124026309
GI number: 124026309
Start: 1310919
End: 1311890
Strand: Direct
Name: mhpC [H]
Synonym: NATL1_16031
Alternate gene names: 124026309
Gene position: 1310919-1311890 (Clockwise)
Preceding gene: 124026304
Following gene: 124026310
Centisome position: 70.3
GC content: 33.33
Gene sequence:
>972_bases ATGCAGCAAAATATTCTTAATAAAGAACCTTTAATGGGATCTCCTCATTGGGGTGAGTCTAAGTATTGGAGCTACAAAGA TCTTAGTGTTCACTTCAGAGTGACTGGAGAGGAATCTAATCCTCCCATTGTTCTAATTCATGGGTTTGGAGCTAGCAGCG ATCACTGGAGAAATAATGCAGAAATATTTGCATCAGAAGGTTTTAGGGTCTTCGGAATAGATTTAATAGGTTTTGGAAAA TCAGAGCAAAATCTTCAAAGTAAAATAAAGCATTTAGAGAATCAATTTTGGGCAAATCAATTAGCTTCATTTCTTGATGA AATTGTTGACATTCAAAAGAACGGAAAAGTTATATTAATTGGAAATTCATTGGGAGCTTTAACAGCAATCACAACTCTCT CTAATAGACCAGAGTTAATAAAAACAATAATTGCAGCACCACTACCAGAGCCAGTTTTTGTTAATCCAATTAAATTTTCT TTTCCAAATTGGCTTTTAAAAGTTAAAAGTTTTCTGATAAAAATTGTTTTTCATTTATTTCCACTGAAGACATTAGTAAA TTTGATATCAAGAACAAAATTAATTACTTTTGCTCTTCAAAGCGCCTATTTTCGCTCAATTTTAAATGATACTCCTCTAA AAAGGATAGTTACAGTCCCAGCCAAGAGAGTGAATGCATCCAAAGCTCTAAGAGCTATGTGCATTGGAATGAGCAATAGA CCAAATTCGGCAAAAGGTCCATCTATTATTGAGAAGATTCAAAACCTGTCAAATCGTCCCCCAATTTTATTAATTTGGGG AAAACAGGATAAATTGATACCTATATTTTTAGCAAAAAAACTACTAAAGCTCCATCCTTGGCTTAAATTAACCGTAGTTA ACGAAGCAGGTCATTGTCCCCACGATGAATTACCGAAAGATTTCAATCAAATTGTTATGAAATGGCTGAAGAACTTAAAA ACTTCTAAGTAA
Upstream 100 bases:
>100_bases CATTCAGTCCAGAATCCAAAGGCATGAGCAAATTTTTAAAATAAACTTAAAATGAAACTACAAATGATAAAAAACAAAGT TAAATTGATTCTTGATCTAA
Downstream 100 bases:
>100_bases AAAATATGAAGCACACACTTTCAGTTTTAGTTGAAGATGAATCTGGAGCACTAAGCAGGATTGCAGGCCTTTTTGCAAGA AGAGGATTTAATATTGATAG
Product: putative alpha/beta hydrolase superfamily protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MQQNILNKEPLMGSPHWGESKYWSYKDLSVHFRVTGEESNPPIVLIHGFGASSDHWRNNAEIFASEGFRVFGIDLIGFGK SEQNLQSKIKHLENQFWANQLASFLDEIVDIQKNGKVILIGNSLGALTAITTLSNRPELIKTIIAAPLPEPVFVNPIKFS FPNWLLKVKSFLIKIVFHLFPLKTLVNLISRTKLITFALQSAYFRSILNDTPLKRIVTVPAKRVNASKALRAMCIGMSNR PNSAKGPSIIEKIQNLSNRPPILLIWGKQDKLIPIFLAKKLLKLHPWLKLTVVNEAGHCPHDELPKDFNQIVMKWLKNLK TSK
Sequences:
>Translated_323_residues MQQNILNKEPLMGSPHWGESKYWSYKDLSVHFRVTGEESNPPIVLIHGFGASSDHWRNNAEIFASEGFRVFGIDLIGFGK SEQNLQSKIKHLENQFWANQLASFLDEIVDIQKNGKVILIGNSLGALTAITTLSNRPELIKTIIAAPLPEPVFVNPIKFS FPNWLLKVKSFLIKIVFHLFPLKTLVNLISRTKLITFALQSAYFRSILNDTPLKRIVTVPAKRVNASKALRAMCIGMSNR PNSAKGPSIIEKIQNLSNRPPILLIWGKQDKLIPIFLAKKLLKLHPWLKLTVVNEAGHCPHDELPKDFNQIVMKWLKNLK TSK >Mature_323_residues MQQNILNKEPLMGSPHWGESKYWSYKDLSVHFRVTGEESNPPIVLIHGFGASSDHWRNNAEIFASEGFRVFGIDLIGFGK SEQNLQSKIKHLENQFWANQLASFLDEIVDIQKNGKVILIGNSLGALTAITTLSNRPELIKTIIAAPLPEPVFVNPIKFS FPNWLLKVKSFLIKIVFHLFPLKTLVNLISRTKLITFALQSAYFRSILNDTPLKRIVTVPAKRVNASKALRAMCIGMSNR PNSAKGPSIIEKIQNLSNRPPILLIWGKQDKLIPIFLAKKLLKLHPWLKLTVVNEAGHCPHDELPKDFNQIVMKWLKNLK TSK
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 36566; Mature: 36566
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQNILNKEPLMGSPHWGESKYWSYKDLSVHFRVTGEESNPPIVLIHGFGASSDHWRNNA CCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC EIFASEGFRVFGIDLIGFGKSEQNLQSKIKHLENQFWANQLASFLDEIVDIQKNGKVILI EEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE GNSLGALTAITTLSNRPELIKTIIAAPLPEPVFVNPIKFSFPNWLLKVKSFLIKIVFHLF ECCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCEECCCHHHHHHHHHHHHHHHHHHH PLKTLVNLISRTKLITFALQSAYFRSILNDTPLKRIVTVPAKRVNASKALRAMCIGMSNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCHHHHHHHHHHCCCCC PNSAKGPSIIEKIQNLSNRPPILLIWGKQDKLIPIFLAKKLLKLHPWLKLTVVNEAGHCP CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCC HDELPKDFNQIVMKWLKNLKTSK CCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQQNILNKEPLMGSPHWGESKYWSYKDLSVHFRVTGEESNPPIVLIHGFGASSDHWRNNA CCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC EIFASEGFRVFGIDLIGFGKSEQNLQSKIKHLENQFWANQLASFLDEIVDIQKNGKVILI EEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE GNSLGALTAITTLSNRPELIKTIIAAPLPEPVFVNPIKFSFPNWLLKVKSFLIKIVFHLF ECCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCEECCCHHHHHHHHHHHHHHHHHHH PLKTLVNLISRTKLITFALQSAYFRSILNDTPLKRIVTVPAKRVNASKALRAMCIGMSNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCHHHHHHHHHHCCCCC PNSAKGPSIIEKIQNLSNRPPILLIWGKQDKLIPIFLAKKLLKLHPWLKLTVVNEAGHCP CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCC HDELPKDFNQIVMKWLKNLKTSK CCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA