Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026277

Identifier: 124026277

GI number: 124026277

Start: 1276594

End: 1278027

Strand: Reverse

Name: 124026277

Synonym: NATL1_15711

Alternate gene names: NA

Gene position: 1278027-1276594 (Counterclockwise)

Preceding gene: 124026280

Following gene: 124026276

Centisome position: 68.54

GC content: 36.54

Gene sequence:

>1434_bases
ATGTTTAAAGATTATCAACCTAAAAAGGGATACGACGAATACTTTTCTTCTGATGATTTTTTGCCGAGATCATCTTTAGA
GCCTTTACTTTCTTCCTTAGGAGAGATGGGCTTAGATCAATTGAACATAAGTCATGAAATAGCAAGAAAGCTTCTTCTTC
GCCATGGAGCAACTTTCCGTCTCAATGATTCTGGAAATAAAGGTTCCGAAAGGATTCTTCCCTTTGACCCTCTTCCAAGA
GTTATTGGTTCTTTAGAATGGTTAGATTTAGAGAGGGGACTGATACAACGGCTCGAAGCGATAGATTTATTTTTAGCCGA
CGTATATGGAAAACAACAAATAATTAAAGATGGGATTATTCCTAGAGATCTCATTGAGAGTTCTGATGGATGGCGACCTG
AGATGAAGGGCTTTGTTCTACCCCTAGGAAAATGGTGCCATGTCTCTGGTCTTGATCTCATTAGAGATGGCAAAGGCGAG
TGGCTAGTTTTAGAGGATAATCTTCGATGCCCTTCAGGTGTCGCATATTTCTTAGAAAATAGATTAGTAATGAAAAGAAT
TTTTCCTAGCCTTTTTAATGGAAGAGTTGTTCGGCCTATTGATGATTACCCTTCATATTTACTTAAATCACTACAAGAAT
TAGCAGTCTGGACGGATACACCTAAAGTTGTTCTACTGACTCCTGGAGTTTTTAATAGTGCATATTTTGAGCACAGTTAT
TTAGCTCAACAAATGGGCATTCAACTAGTTGAAGGAAGTGATTTAGTTTGTCAGAATCAAAATGTTTATTTGAAAACTAC
TTCTGGTATTAAAAAAGTTGATGTAATTTACCGTCGGATAGATGATGACTATTTAGACCCTAAGTTTTTTAGAAAAGATT
CAATGCTTGGAGTCCCAGGTCTTATTGATGTACTGAGAAAAGGTAGGGTAGCTATTGCAAATGCACCTGGTACAGGGCTA
GCAGATGATAAATTAATTTATACTTTTGTACCTGAAATGATCAGGTATTATTTAAAAGAGGAACCAAGAATTAACAATGT
TAAAACATATGTTTGTGCAAGATCAAGTGACCTTAGATTTGTACTAGAAAATCTTGGTAAATTAGTTGTCAAAAGTGTCT
CTGAAGCAGGGGGTTATGGAATGTTAATTGGACCACACTCATCCCAAATAGATATTGATAAATTTTCAGCAAAGATAAAA
GCTAATCCAAGAAATTATATAGCGCAACCAACATTAGACTTGTCTACAGTTCCATCCCTTAGTGATGGTGAAGTTTACCC
CTGTCATGTTGATTTAAGACCCTATGTTCTCAGAGGAAAGAATACTTGGGTAAGCCCTGGAGGATTAACAAGAGTAGCCT
TAAAAAGAGATTCTTTGATTGTTAATTCCTCTCAAGGAGGCGGATGTAAGGATACTTGGGTCGTTAGTAAATAA

Upstream 100 bases:

>100_bases
TTTATTGTTGTCATATAGTTTCTTGCCTTCTTTTTGTATTTTTAGATACCTGAGTTATGAATATCTTGATTCATATTTTA
TAAAGTTTTTCGCGGTTGAT

Downstream 100 bases:

>100_bases
TAAAAATGTTACTTAGCAGAGTCGCTGAATCACTTTATTGGATTAACAGATATCTTGAGCGTGCAGAAAATATTTCTAGA
TTTGTTGAGGTGAGTGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFRLNDSGNKGSERILPFDPLPR
VIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGIIPRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGE
WLVLEDNLRCPSGVAYFLENRLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY
LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPGLIDVLRKGRVAIANAPGTGL
ADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRFVLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIK
ANPRNYIAQPTLDLSTVPSLSDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK

Sequences:

>Translated_477_residues
MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFRLNDSGNKGSERILPFDPLPR
VIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGIIPRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGE
WLVLEDNLRCPSGVAYFLENRLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY
LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPGLIDVLRKGRVAIANAPGTGL
ADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRFVLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIK
ANPRNYIAQPTLDLSTVPSLSDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK
>Mature_477_residues
MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFRLNDSGNKGSERILPFDPLPR
VIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGIIPRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGE
WLVLEDNLRCPSGVAYFLENRLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY
LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPGLIDVLRKGRVAIANAPGTGL
ADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRFVLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIK
ANPRNYIAQPTLDLSTVPSLSDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 53687; Mature: 53687

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFR
CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCEEE
LNDSGNKGSERILPFDPLPRVIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGII
ECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
PRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGEWLVLEDNLRCPSGVAYFLEN
CHHHHCCCCCCCCCCCCEEEECCCEEECCCCHHEECCCCCEEEEECCCCCCCHHHHHHHH
RLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY
HHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHH
LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPG
HHHHHCEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCH
LIDVLRKGRVAIANAPGTGLADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRF
HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHH
VLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIKANPRNYIAQPTLDLSTVPSL
HHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHCEEEECCCHHCCCCCCCCCCCCCCC
SDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK
CCCCEEEEEECCCCEEEECCCCEECCCCCEEEEEECCEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure
MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFR
CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCEEE
LNDSGNKGSERILPFDPLPRVIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGII
ECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
PRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGEWLVLEDNLRCPSGVAYFLEN
CHHHHCCCCCCCCCCCCEEEECCCEEECCCCHHEECCCCCEEEEECCCCCCCHHHHHHHH
RLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY
HHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHH
LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPG
HHHHHCEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCH
LIDVLRKGRVAIANAPGTGLADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRF
HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHH
VLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIKANPRNYIAQPTLDLSTVPSL
HHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHCEEEECCCHHCCCCCCCCCCCCCCC
SDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK
CCCCEEEEEECCCCEEEECCCCEECCCCCEEEEEECCEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]