| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026277
Identifier: 124026277
GI number: 124026277
Start: 1276594
End: 1278027
Strand: Reverse
Name: 124026277
Synonym: NATL1_15711
Alternate gene names: NA
Gene position: 1278027-1276594 (Counterclockwise)
Preceding gene: 124026280
Following gene: 124026276
Centisome position: 68.54
GC content: 36.54
Gene sequence:
>1434_bases ATGTTTAAAGATTATCAACCTAAAAAGGGATACGACGAATACTTTTCTTCTGATGATTTTTTGCCGAGATCATCTTTAGA GCCTTTACTTTCTTCCTTAGGAGAGATGGGCTTAGATCAATTGAACATAAGTCATGAAATAGCAAGAAAGCTTCTTCTTC GCCATGGAGCAACTTTCCGTCTCAATGATTCTGGAAATAAAGGTTCCGAAAGGATTCTTCCCTTTGACCCTCTTCCAAGA GTTATTGGTTCTTTAGAATGGTTAGATTTAGAGAGGGGACTGATACAACGGCTCGAAGCGATAGATTTATTTTTAGCCGA CGTATATGGAAAACAACAAATAATTAAAGATGGGATTATTCCTAGAGATCTCATTGAGAGTTCTGATGGATGGCGACCTG AGATGAAGGGCTTTGTTCTACCCCTAGGAAAATGGTGCCATGTCTCTGGTCTTGATCTCATTAGAGATGGCAAAGGCGAG TGGCTAGTTTTAGAGGATAATCTTCGATGCCCTTCAGGTGTCGCATATTTCTTAGAAAATAGATTAGTAATGAAAAGAAT TTTTCCTAGCCTTTTTAATGGAAGAGTTGTTCGGCCTATTGATGATTACCCTTCATATTTACTTAAATCACTACAAGAAT TAGCAGTCTGGACGGATACACCTAAAGTTGTTCTACTGACTCCTGGAGTTTTTAATAGTGCATATTTTGAGCACAGTTAT TTAGCTCAACAAATGGGCATTCAACTAGTTGAAGGAAGTGATTTAGTTTGTCAGAATCAAAATGTTTATTTGAAAACTAC TTCTGGTATTAAAAAAGTTGATGTAATTTACCGTCGGATAGATGATGACTATTTAGACCCTAAGTTTTTTAGAAAAGATT CAATGCTTGGAGTCCCAGGTCTTATTGATGTACTGAGAAAAGGTAGGGTAGCTATTGCAAATGCACCTGGTACAGGGCTA GCAGATGATAAATTAATTTATACTTTTGTACCTGAAATGATCAGGTATTATTTAAAAGAGGAACCAAGAATTAACAATGT TAAAACATATGTTTGTGCAAGATCAAGTGACCTTAGATTTGTACTAGAAAATCTTGGTAAATTAGTTGTCAAAAGTGTCT CTGAAGCAGGGGGTTATGGAATGTTAATTGGACCACACTCATCCCAAATAGATATTGATAAATTTTCAGCAAAGATAAAA GCTAATCCAAGAAATTATATAGCGCAACCAACATTAGACTTGTCTACAGTTCCATCCCTTAGTGATGGTGAAGTTTACCC CTGTCATGTTGATTTAAGACCCTATGTTCTCAGAGGAAAGAATACTTGGGTAAGCCCTGGAGGATTAACAAGAGTAGCCT TAAAAAGAGATTCTTTGATTGTTAATTCCTCTCAAGGAGGCGGATGTAAGGATACTTGGGTCGTTAGTAAATAA
Upstream 100 bases:
>100_bases TTTATTGTTGTCATATAGTTTCTTGCCTTCTTTTTGTATTTTTAGATACCTGAGTTATGAATATCTTGATTCATATTTTA TAAAGTTTTTCGCGGTTGAT
Downstream 100 bases:
>100_bases TAAAAATGTTACTTAGCAGAGTCGCTGAATCACTTTATTGGATTAACAGATATCTTGAGCGTGCAGAAAATATTTCTAGA TTTGTTGAGGTGAGTGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFRLNDSGNKGSERILPFDPLPR VIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGIIPRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGE WLVLEDNLRCPSGVAYFLENRLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPGLIDVLRKGRVAIANAPGTGL ADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRFVLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIK ANPRNYIAQPTLDLSTVPSLSDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK
Sequences:
>Translated_477_residues MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFRLNDSGNKGSERILPFDPLPR VIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGIIPRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGE WLVLEDNLRCPSGVAYFLENRLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPGLIDVLRKGRVAIANAPGTGL ADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRFVLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIK ANPRNYIAQPTLDLSTVPSLSDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK >Mature_477_residues MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFRLNDSGNKGSERILPFDPLPR VIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGIIPRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGE WLVLEDNLRCPSGVAYFLENRLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPGLIDVLRKGRVAIANAPGTGL ADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRFVLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIK ANPRNYIAQPTLDLSTVPSLSDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 53687; Mature: 53687
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFR CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCEEE LNDSGNKGSERILPFDPLPRVIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGII ECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC PRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGEWLVLEDNLRCPSGVAYFLEN CHHHHCCCCCCCCCCCCEEEECCCEEECCCCHHEECCCCCEEEEECCCCCCCHHHHHHHH RLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY HHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHH LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPG HHHHHCEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCH LIDVLRKGRVAIANAPGTGLADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRF HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHH VLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIKANPRNYIAQPTLDLSTVPSL HHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHCEEEECCCHHCCCCCCCCCCCCCCC SDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK CCCCEEEEEECCCCEEEECCCCEECCCCCEEEEEECCEEEEECCCCCCCCCCEEECC >Mature Secondary Structure MFKDYQPKKGYDEYFSSDDFLPRSSLEPLLSSLGEMGLDQLNISHEIARKLLLRHGATFR CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCEEE LNDSGNKGSERILPFDPLPRVIGSLEWLDLERGLIQRLEAIDLFLADVYGKQQIIKDGII ECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC PRDLIESSDGWRPEMKGFVLPLGKWCHVSGLDLIRDGKGEWLVLEDNLRCPSGVAYFLEN CHHHHCCCCCCCCCCCCEEEECCCEEECCCCHHEECCCCCEEEEECCCCCCCHHHHHHHH RLVMKRIFPSLFNGRVVRPIDDYPSYLLKSLQELAVWTDTPKVVLLTPGVFNSAYFEHSY HHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHH LAQQMGIQLVEGSDLVCQNQNVYLKTTSGIKKVDVIYRRIDDDYLDPKFFRKDSMLGVPG HHHHHCEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCH LIDVLRKGRVAIANAPGTGLADDKLIYTFVPEMIRYYLKEEPRINNVKTYVCARSSDLRF HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHH VLENLGKLVVKSVSEAGGYGMLIGPHSSQIDIDKFSAKIKANPRNYIAQPTLDLSTVPSL HHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHCEEEECCCHHCCCCCCCCCCCCCCC SDGEVYPCHVDLRPYVLRGKNTWVSPGGLTRVALKRDSLIVNSSQGGGCKDTWVVSK CCCCEEEEEECCCCEEEECCCCEECCCCCEEEEEECCEEEEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]