| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026276
Identifier: 124026276
GI number: 124026276
Start: 1275614
End: 1276588
Strand: Reverse
Name: 124026276
Synonym: NATL1_15701
Alternate gene names: NA
Gene position: 1276588-1275614 (Counterclockwise)
Preceding gene: 124026277
Following gene: 124026275
Centisome position: 68.46
GC content: 33.44
Gene sequence:
>975_bases ATGTTACTTAGCAGAGTCGCTGAATCACTTTATTGGATTAACAGATATCTTGAGCGTGCAGAAAATATTTCTAGATTTGT TGAGGTGAGTGAGTCTATGGCCCTGGATTGTCCTCCTGGGAGTGCTGAGCCTTGGTTGCCTTTGGTCGACGCTAGTGGAG ATAGAAATAAGTTTGATGAAAGCTATGTAAATAAAACTCCTAGTGATGTAACAAATTTCCTTATTAGAGATAGAGAAAAT CCTAATAGCATTTTAAGCTGTATTTGTATGGCAAGAGAAAATGCTCGTCAAATAAGGGATGTTATTACTTCTGAAATGTG GGAGCAAATTAATAGTTTATATTGGAGTGTTCAAGAAGGTGAGGTGATCTGGCATCAACCTGCTCAAGAACAATTATTTG AAATTAGAAGAGGTTGTCAATTATTTTATGGAGTTACTGATGCTACTTTTAGTCATGATATAGCATGGGATTTTAGTAAA TTAGGAAGGTTAATTGAGAGAGCTGATAAAACTTCTAGGATATTAGATGTAAAGTATTTTTTACTTTTACCAAATCTAAA AGAACTTGGAGGAGCCTTGGATGAGCTTCAGTGGATTTCTTTATTACGATCAGCGGGAGCTTATCAAATGTTTAGGATTT CTGAGCAAGGTTCAATAACACCAAATGCAATTGCTAGCTTTTTATTATTGGACCCTATTTTTCCAAGATCAGTTAGATTT TGCCTTGAAGGTATTAAAGAATCTTTGGGGAAAATTCAAAATTCTCCCATTTCTAAAAAACCAAATGATCTTGAATGTTT AATAGGATTATTGCTTTCGAAATGGAGCTTTGTAAGAATCGATCACTTAATTAAAGATGGTTTACATGAGGCAATTGATA GCCTTCAGATTGATTTAAATAAGTTGCATGATCTTATACATAGTATTTATTTTAGAAATGATAAAAGGTTTGATTTTGAA TCTTTACAAGAATGA
Upstream 100 bases:
>100_bases GAGGATTAACAAGAGTAGCCTTAAAAAGAGATTCTTTGATTGTTAATTCCTCTCAAGGAGGCGGATGTAAGGATACTTGG GTCGTTAGTAAATAATAAAA
Downstream 100 bases:
>100_bases AAAAGAAAATAATTCATACATTAGTTTATACTTATGAAATACCTGTTTTACTTGAGGAGCATTTAATTTGTCTTAAGCCA AGATCTAATAGCTTTCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLLSRVAESLYWINRYLERAENISRFVEVSESMALDCPPGSAEPWLPLVDASGDRNKFDESYVNKTPSDVTNFLIRDREN PNSILSCICMARENARQIRDVITSEMWEQINSLYWSVQEGEVIWHQPAQEQLFEIRRGCQLFYGVTDATFSHDIAWDFSK LGRLIERADKTSRILDVKYFLLLPNLKELGGALDELQWISLLRSAGAYQMFRISEQGSITPNAIASFLLLDPIFPRSVRF CLEGIKESLGKIQNSPISKKPNDLECLIGLLLSKWSFVRIDHLIKDGLHEAIDSLQIDLNKLHDLIHSIYFRNDKRFDFE SLQE
Sequences:
>Translated_324_residues MLLSRVAESLYWINRYLERAENISRFVEVSESMALDCPPGSAEPWLPLVDASGDRNKFDESYVNKTPSDVTNFLIRDREN PNSILSCICMARENARQIRDVITSEMWEQINSLYWSVQEGEVIWHQPAQEQLFEIRRGCQLFYGVTDATFSHDIAWDFSK LGRLIERADKTSRILDVKYFLLLPNLKELGGALDELQWISLLRSAGAYQMFRISEQGSITPNAIASFLLLDPIFPRSVRF CLEGIKESLGKIQNSPISKKPNDLECLIGLLLSKWSFVRIDHLIKDGLHEAIDSLQIDLNKLHDLIHSIYFRNDKRFDFE SLQE >Mature_324_residues MLLSRVAESLYWINRYLERAENISRFVEVSESMALDCPPGSAEPWLPLVDASGDRNKFDESYVNKTPSDVTNFLIRDREN PNSILSCICMARENARQIRDVITSEMWEQINSLYWSVQEGEVIWHQPAQEQLFEIRRGCQLFYGVTDATFSHDIAWDFSK LGRLIERADKTSRILDVKYFLLLPNLKELGGALDELQWISLLRSAGAYQMFRISEQGSITPNAIASFLLLDPIFPRSVRF CLEGIKESLGKIQNSPISKKPNDLECLIGLLLSKWSFVRIDHLIKDGLHEAIDSLQIDLNKLHDLIHSIYFRNDKRFDFE SLQE
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37407; Mature: 37407
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSRVAESLYWINRYLERAENISRFVEVSESMALDCPPGSAEPWLPLVDASGDRNKFDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEECCCCCCHHHH SYVNKTPSDVTNFLIRDRENPNSILSCICMARENARQIRDVITSEMWEQINSLYWSVQEG HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EVIWHQPAQEQLFEIRRGCQLFYGVTDATFSHDIAWDFSKLGRLIERADKTSRILDVKYF CEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPNLKELGGALDELQWISLLRSAGAYQMFRISEQGSITPNAIASFLLLDPIFPRSVRF HHCCCHHHHCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH CLEGIKESLGKIQNSPISKKPNDLECLIGLLLSKWSFVRIDHLIKDGLHEAIDSLQIDLN HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLHDLIHSIYFRNDKRFDFESLQE HHHHHHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure MLLSRVAESLYWINRYLERAENISRFVEVSESMALDCPPGSAEPWLPLVDASGDRNKFDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEECCCCCCHHHH SYVNKTPSDVTNFLIRDRENPNSILSCICMARENARQIRDVITSEMWEQINSLYWSVQEG HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EVIWHQPAQEQLFEIRRGCQLFYGVTDATFSHDIAWDFSKLGRLIERADKTSRILDVKYF CEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPNLKELGGALDELQWISLLRSAGAYQMFRISEQGSITPNAIASFLLLDPIFPRSVRF HHCCCHHHHCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH CLEGIKESLGKIQNSPISKKPNDLECLIGLLLSKWSFVRIDHLIKDGLHEAIDSLQIDLN HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLHDLIHSIYFRNDKRFDFESLQE HHHHHHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA