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The map label for this gene is crtL [H]

Identifier: 124026228

GI number: 124026228

Start: 1237265

End: 1238509

Strand: Reverse

Name: crtL [H]

Synonym: NATL1_15221

Alternate gene names: 124026228

Gene position: 1238509-1237265 (Counterclockwise)

Preceding gene: 124026229

Following gene: 124026226

Centisome position: 66.42

GC content: 36.63

Gene sequence:

>1245_bases
TTGAAATTGAATAATGTCGCTGATGTATTAGTCATGGGAGCAGGACCTGCTGCTCTTTGCATCGCTGCTGAGTTAGTTCA
ACACGGACTTGATGTTCAGGCGATTGCTTCTAAGTCTCCTTTAGAACCTTGGCCAAACACTTATGGGATTTGGGCATCTG
AACTTGAGTCTTTAAATATGCAAGAACTATTGAAATATAGATGGGAAGATACTGTTAGCTTTTTTGGAGATGGATTAGGT
GGAAAAGGTAATATTTGTACAAATCATTATCTTGATTACGGCCTCTTTAATTCAATTAATTTTCAGGAGGCTCTTCTTGA
GAGATGTAATGGACTTCCTTGGCAACTAGAAACTGTTGATAATATTGATTTTAGAGAAAGAGAGACCGTTGTTATTTGTA
CTTCCGGAAAAAAATATTTTGCTAGGCTCGTTATTGATGCAAGTGGTTATAAAACCCCTTTTATCAGGAGGCCTAAGCAT
GATCAAATCGCTAAGCAAGCGGCATATGGGGTGGTTGGGAAATTTAGTTCTGCTCCTGTAGAGAAAAATCGTTTTGTATT
GATGGATTTTAGATCAGACCATTTAAATGCCAACGAATTAGAGGAGCCACCTTCTTTCCTTTATGCTATGGACCTTGGAG
ATGGTAGTTATTTTGTAGAAGAAACATCTTTGGCTTGTTCACCTCCAATTTCATTTGAATCATTAAAAGCAAGATTAAAT
TTACGACTATCTAATAAAGGTATTCAAATAGACGAAATTTTCCATGAAGAACATTGTCTTTTTCCAATGAACTTGCCATT
GCCTTATAGAGATCAACCCCTTTTGGCCTTTGGAGGCTCGGCCAGTATGGTTCATCCTGCTTCGGGATATCTTGTTGGAT
CCCTTTTAAGGAGAGCACCTTCATTAGCAAGTGAAATAGCAAAAGTAATTAAAAAAGAACCTCTTATGACTACATCTCAG
ATAGCCATAAGAGGATGGAAAACCCTATGGACAAATGAATTAGTTCAAAGACATCGTCTTTATCAGTTTGGACTTCAAAG
ACTAATGAGCTTTGACGAAACTTTATTAAGATCTTTTTTTGATACTTTTTTTAAATTACCTAAAAAAGATTGGTTCGGAT
ATTTAACTAATACGCTTCCTTTGCCAAGACTTTTTATTGTGATGCTCAAACTATTTTACATCGCCCCATCCAAGGTCAGG
TTGGGAATGACTGGTTTACTTATAAACAAGCGTGAAAAAACTTAG

Upstream 100 bases:

>100_bases
CGGAGGTTGTTTTAGTTCCCCCAGAGCAAATTAATGATGATGATGAGAATCAATCATCATTATCTAAAGAATCAATAAAT
ACTGATACAACGTCAAAAAA

Downstream 100 bases:

>100_bases
CTTTTCTTTTTCCAATCAATAAGAGAAATCAAAGGAAATAGACAATCCTCTTTTTCTATTTCCTCTAGAATCTTTTCATT
TATAATTTTATTATTTTTTA

Product: putative lycopene beta cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKLNNVADVLVMGAGPAALCIAAELVQHGLDVQAIASKSPLEPWPNTYGIWASELESLNMQELLKYRWEDTVSFFGDGLG
GKGNICTNHYLDYGLFNSINFQEALLERCNGLPWQLETVDNIDFRERETVVICTSGKKYFARLVIDASGYKTPFIRRPKH
DQIAKQAAYGVVGKFSSAPVEKNRFVLMDFRSDHLNANELEEPPSFLYAMDLGDGSYFVEETSLACSPPISFESLKARLN
LRLSNKGIQIDEIFHEEHCLFPMNLPLPYRDQPLLAFGGSASMVHPASGYLVGSLLRRAPSLASEIAKVIKKEPLMTTSQ
IAIRGWKTLWTNELVQRHRLYQFGLQRLMSFDETLLRSFFDTFFKLPKKDWFGYLTNTLPLPRLFIVMLKLFYIAPSKVR
LGMTGLLINKREKT

Sequences:

>Translated_414_residues
MKLNNVADVLVMGAGPAALCIAAELVQHGLDVQAIASKSPLEPWPNTYGIWASELESLNMQELLKYRWEDTVSFFGDGLG
GKGNICTNHYLDYGLFNSINFQEALLERCNGLPWQLETVDNIDFRERETVVICTSGKKYFARLVIDASGYKTPFIRRPKH
DQIAKQAAYGVVGKFSSAPVEKNRFVLMDFRSDHLNANELEEPPSFLYAMDLGDGSYFVEETSLACSPPISFESLKARLN
LRLSNKGIQIDEIFHEEHCLFPMNLPLPYRDQPLLAFGGSASMVHPASGYLVGSLLRRAPSLASEIAKVIKKEPLMTTSQ
IAIRGWKTLWTNELVQRHRLYQFGLQRLMSFDETLLRSFFDTFFKLPKKDWFGYLTNTLPLPRLFIVMLKLFYIAPSKVR
LGMTGLLINKREKT
>Mature_414_residues
MKLNNVADVLVMGAGPAALCIAAELVQHGLDVQAIASKSPLEPWPNTYGIWASELESLNMQELLKYRWEDTVSFFGDGLG
GKGNICTNHYLDYGLFNSINFQEALLERCNGLPWQLETVDNIDFRERETVVICTSGKKYFARLVIDASGYKTPFIRRPKH
DQIAKQAAYGVVGKFSSAPVEKNRFVLMDFRSDHLNANELEEPPSFLYAMDLGDGSYFVEETSLACSPPISFESLKARLN
LRLSNKGIQIDEIFHEEHCLFPMNLPLPYRDQPLLAFGGSASMVHPASGYLVGSLLRRAPSLASEIAKVIKKEPLMTTSQ
IAIRGWKTLWTNELVQRHRLYQFGLQRLMSFDETLLRSFFDTFFKLPKKDWFGYLTNTLPLPRLFIVMLKLFYIAPSKVR
LGMTGLLINKREKT

Specific function: Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lycopene cyclase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR000103 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 46924; Mature: 46924

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNNVADVLVMGAGPAALCIAAELVQHGLDVQAIASKSPLEPWPNTYGIWASELESLNM
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCH
QELLKYRWEDTVSFFGDGLGGKGNICTNHYLDYGLFNSINFQEALLERCNGLPWQLETVD
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECC
NIDFRERETVVICTSGKKYFARLVIDASGYKTPFIRRPKHDQIAKQAAYGVVGKFSSAPV
CCCCCCCCEEEEEECCHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
EKNRFVLMDFRSDHLNANELEEPPSFLYAMDLGDGSYFVEETSLACSPPISFESLKARLN
CCCCEEEEECCCCCCCCHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHEE
LRLSNKGIQIDEIFHEEHCLFPMNLPLPYRDQPLLAFGGSASMVHPASGYLVGSLLRRAP
EEECCCCCCHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHCH
SLASEIAKVIKKEPLMTTSQIAIRGWKTLWTNELVQRHRLYQFGLQRLMSFDETLLRSFF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFFKLPKKDWFGYLTNTLPLPRLFIVMLKLFYIAPSKVRLGMTGLLINKREKT
HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECEEEEEEECCCCC
>Mature Secondary Structure
MKLNNVADVLVMGAGPAALCIAAELVQHGLDVQAIASKSPLEPWPNTYGIWASELESLNM
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCH
QELLKYRWEDTVSFFGDGLGGKGNICTNHYLDYGLFNSINFQEALLERCNGLPWQLETVD
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECC
NIDFRERETVVICTSGKKYFARLVIDASGYKTPFIRRPKHDQIAKQAAYGVVGKFSSAPV
CCCCCCCCEEEEEECCHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
EKNRFVLMDFRSDHLNANELEEPPSFLYAMDLGDGSYFVEETSLACSPPISFESLKARLN
CCCCEEEEECCCCCCCCHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHEE
LRLSNKGIQIDEIFHEEHCLFPMNLPLPYRDQPLLAFGGSASMVHPASGYLVGSLLRRAP
EEECCCCCCHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCEECCCCHHHHHHHHHHCH
SLASEIAKVIKKEPLMTTSQIAIRGWKTLWTNELVQRHRLYQFGLQRLMSFDETLLRSFF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFFKLPKKDWFGYLTNTLPLPRLFIVMLKLFYIAPSKVRLGMTGLLINKREKT
HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7919981 [H]