| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is yceA [C]
Identifier: 124026192
GI number: 124026192
Start: 1196365
End: 1197324
Strand: Reverse
Name: yceA [C]
Synonym: NATL1_14861
Alternate gene names: 124026192
Gene position: 1197324-1196365 (Counterclockwise)
Preceding gene: 124026193
Following gene: 124026191
Centisome position: 64.21
GC content: 34.38
Gene sequence:
>960_bases ATGAAAAAAGATGATAGCCTTAAGAAATTTAAATATAAAGTTGCTGCGTTTTACAATTTTATATCGATTATTGATGAAGA AATTCTTTTAATCAAAGAAGAATTAACGAACTTAGCAACGAATCAAAAAATAAAAGGAACTATTTTATTAGCTTCTGAAG GTGTTAACGGTACGATCTGTGGAACTGAAAATGCGATAGTTCTATTCATTGAAACATTAGAGAATCTTTTAAAGGTATCG GATATTAATGTCAAATATAGTTGGTGTGAAAGACAGGCTTTTCGCCGCTTTAAAGCTCGTAAGAAAAAAGAAATCGTTAC GATTGGACTAAAAGAAATTAATCCTACTAAATCTGTTGGTAAATACATAAAAGCTGGTGAATGGAATCAGTTTTTAGAAG ATCCTGATAGTGTCGTTATTGATACTCGCAATGACTATGAAATAAAAATTGGAAATTTTGCAGGAGCTCTAAATCCTCAG ACAAGCTCATTCCGTGAATTTCCTGCATGGGTGCAAAAGCATTTAAAACCTTTAATCGAAGAGAATCCCTCTTTAAAAAT AGGAATGTATTGCACGGGTGGAATAAGATGCGAAAAAGCCACTTCTTATTTGATAGAAGAAGGCTTTTCTGACGTACATC ATCTTGAGGGTGGAATACTAAAATATCTAGAAGATGTTTCCTCTGAGAATAGTTTATGGAATGGAGAGTGCTTTGTTTTT GATCAACGTGTCTCTTTAGATCATGAGCTTTTACCCGGTTCACATCGGATGTGTCATGCTTGTGGATTACCCATCTCTCC AGAGGACTTAAAAAAGCCGACGTATATTAAAGGCTTGCAATGTGATGCTTGTGTTAACAAATTCACAGATAGCGATAGAG CTAGATTTGCGGAAAGACAACGTCAAATTGATGAAATAATGAAACGTCTACCTGAAAATTCTATATGGCCATCTTCATGA
Upstream 100 bases:
>100_bases AGATACACTTTTAACTACAAGCAATCCGGAGGTGGAAGCAGACCGTAAGCTTTTAGCGGATGCTGGAATTACGGCTAATT TCTCTTAAGAATAAGTAGGT
Downstream 100 bases:
>100_bases CTAAACCTAATTTAACTGCATTAGAAAAAGAAGCATCTGAAAGGGGCTTGTTGCTGCGAATACAAGTTAGAAGACCTCTC AATATTTGGTCGTTTAAGCT
Product: sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKKDDSLKKFKYKVAAFYNFISIIDEEILLIKEELTNLATNQKIKGTILLASEGVNGTICGTENAIVLFIETLENLLKVS DINVKYSWCERQAFRRFKARKKKEIVTIGLKEINPTKSVGKYIKAGEWNQFLEDPDSVVIDTRNDYEIKIGNFAGALNPQ TSSFREFPAWVQKHLKPLIEENPSLKIGMYCTGGIRCEKATSYLIEEGFSDVHHLEGGILKYLEDVSSENSLWNGECFVF DQRVSLDHELLPGSHRMCHACGLPISPEDLKKPTYIKGLQCDACVNKFTDSDRARFAERQRQIDEIMKRLPENSIWPSS
Sequences:
>Translated_319_residues MKKDDSLKKFKYKVAAFYNFISIIDEEILLIKEELTNLATNQKIKGTILLASEGVNGTICGTENAIVLFIETLENLLKVS DINVKYSWCERQAFRRFKARKKKEIVTIGLKEINPTKSVGKYIKAGEWNQFLEDPDSVVIDTRNDYEIKIGNFAGALNPQ TSSFREFPAWVQKHLKPLIEENPSLKIGMYCTGGIRCEKATSYLIEEGFSDVHHLEGGILKYLEDVSSENSLWNGECFVF DQRVSLDHELLPGSHRMCHACGLPISPEDLKKPTYIKGLQCDACVNKFTDSDRARFAERQRQIDEIMKRLPENSIWPSS >Mature_319_residues MKKDDSLKKFKYKVAAFYNFISIIDEEILLIKEELTNLATNQKIKGTILLASEGVNGTICGTENAIVLFIETLENLLKVS DINVKYSWCERQAFRRFKARKKKEIVTIGLKEINPTKSVGKYIKAGEWNQFLEDPDSVVIDTRNDYEIKIGNFAGALNPQ TSSFREFPAWVQKHLKPLIEENPSLKIGMYCTGGIRCEKATSYLIEEGFSDVHHLEGGILKYLEDVSSENSLWNGECFVF DQRVSLDHELLPGSHRMCHACGLPISPEDLKKPTYIKGLQCDACVNKFTDSDRARFAERQRQIDEIMKRLPENSIWPSS
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=229, Percent_Identity=34.9344978165939, Blast_Score=121, Evalue=7e-28, Organism=Escherichia coli, GI1787294, Length=284, Percent_Identity=30.6338028169014, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1486_PROM1 (A2C3I3)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001015308.1 - ProteinModelPortal: A2C3I3 - STRING: A2C3I3 - GeneID: 4780227 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_14861 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: QVYHLKG - ProtClustDB: CLSK839955 - BioCyc: PMAR167555:NATL1_14861-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 36382; Mature: 36382
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 191-191
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDDSLKKFKYKVAAFYNFISIIDEEILLIKEELTNLATNQKIKGTILLASEGVNGTIC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEE GTENAIVLFIETLENLLKVSDINVKYSWCERQAFRRFKARKKKEIVTIGLKEINPTKSVG CCCCEEEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHH KYIKAGEWNQFLEDPDSVVIDTRNDYEIKIGNFAGALNPQTSSFREFPAWVQKHLKPLIE HHHCCCCCHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ENPSLKIGMYCTGGIRCEKATSYLIEEGFSDVHHLEGGILKYLEDVSSENSLWNGECFVF CCCCEEEEEEEECCEEEHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEE DQRVSLDHELLPGSHRMCHACGLPISPEDLKKPTYIKGLQCDACVNKFTDSDRARFAERQ ECCCCCCHHCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHH RQIDEIMKRLPENSIWPSS HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKDDSLKKFKYKVAAFYNFISIIDEEILLIKEELTNLATNQKIKGTILLASEGVNGTIC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEE GTENAIVLFIETLENLLKVSDINVKYSWCERQAFRRFKARKKKEIVTIGLKEINPTKSVG CCCCEEEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHH KYIKAGEWNQFLEDPDSVVIDTRNDYEIKIGNFAGALNPQTSSFREFPAWVQKHLKPLIE HHHCCCCCHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ENPSLKIGMYCTGGIRCEKATSYLIEEGFSDVHHLEGGILKYLEDVSSENSLWNGECFVF CCCCEEEEEEEECCEEEHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEE DQRVSLDHELLPGSHRMCHACGLPISPEDLKKPTYIKGLQCDACVNKFTDSDRARFAERQ ECCCCCCHHCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHH RQIDEIMKRLPENSIWPSS HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA