| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026191
Identifier: 124026191
GI number: 124026191
Start: 1195868
End: 1196380
Strand: Reverse
Name: 124026191
Synonym: NATL1_14851
Alternate gene names: NA
Gene position: 1196380-1195868 (Counterclockwise)
Preceding gene: 124026192
Following gene: 124026188
Centisome position: 64.16
GC content: 39.57
Gene sequence:
>513_bases ATGGCCATCTTCATGACTAAACCTAATTTAACTGCATTAGAAAAAGAAGCATCTGAAAGGGGCTTGTTGCTGCGAATACA AGTTAGAAGACCTCTCAATATTTGGTCGTTTAAGCTGGTTGTTGGTGAAATAACCAGTAATACAAAAATTCAGTTGTTGG GTGAAATGAAAGGGTGGGCATATAAAAATACTAAAGGACTTCAGCTTGATACTATGAAGGTTGGCAAGAACGCCAACTCT AAAATAGGTGACTTAATATGGGCTTCAACTATGGCCTGGGCTTTAGAAGAGACTCCCTGTCGTAGTGCGAGATTATTGGC TATTTATGATGAAAATAATCAGCATGAAATCTTGCAACGTTATTTTCGTAGGCGTGGATTTAATACTGTTCGAAAAGTTG GATCCTCTCCCTTGGATTTACCTTTGAGACTTGTTTGGGGAGGCGCAGGTGCTTTTATGGTAGGTAATTGTGAGAAAGTG TTTGAAAGAAGTTATCGGAGTTGGTCGGAGTAG
Upstream 100 bases:
>100_bases ATGCTTGTGTTAACAAATTCACAGATAGCGATAGAGCTAGATTTGCGGAAAGACAACGTCAAATTGATGAAATAATGAAA CGTCTACCTGAAAATTCTAT
Downstream 100 bases:
>100_bases TTAGATTTTTTAAGGAGGCTAATCTAAGGTCTCATTCGCATGGTAGCTGCTTCTTACTAAAGGACCGCTGTTTACTTTCT TAAAACCTAATCCCTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAIFMTKPNLTALEKEASERGLLLRIQVRRPLNIWSFKLVVGEITSNTKIQLLGEMKGWAYKNTKGLQLDTMKVGKNANS KIGDLIWASTMAWALEETPCRSARLLAIYDENNQHEILQRYFRRRGFNTVRKVGSSPLDLPLRLVWGGAGAFMVGNCEKV FERSYRSWSE
Sequences:
>Translated_170_residues MAIFMTKPNLTALEKEASERGLLLRIQVRRPLNIWSFKLVVGEITSNTKIQLLGEMKGWAYKNTKGLQLDTMKVGKNANS KIGDLIWASTMAWALEETPCRSARLLAIYDENNQHEILQRYFRRRGFNTVRKVGSSPLDLPLRLVWGGAGAFMVGNCEKV FERSYRSWSE >Mature_169_residues AIFMTKPNLTALEKEASERGLLLRIQVRRPLNIWSFKLVVGEITSNTKIQLLGEMKGWAYKNTKGLQLDTMKVGKNANSK IGDLIWASTMAWALEETPCRSARLLAIYDENNQHEILQRYFRRRGFNTVRKVGSSPLDLPLRLVWGGAGAFMVGNCEKVF ERSYRSWSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19440; Mature: 19309
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFMTKPNLTALEKEASERGLLLRIQVRRPLNIWSFKLVVGEITSNTKIQLLGEMKGWA CEEEEECCCCHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCE YKNTKGLQLDTMKVGKNANSKIGDLIWASTMAWALEETPCRSARLLAIYDENNQHEILQR ECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHH YFRRRGFNTVRKVGSSPLDLPLRLVWGGAGAFMVGNCEKVFERSYRSWSE HHHHCCCHHHHHHCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCC >Mature Secondary Structure AIFMTKPNLTALEKEASERGLLLRIQVRRPLNIWSFKLVVGEITSNTKIQLLGEMKGWA EEEEECCCCHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCE YKNTKGLQLDTMKVGKNANSKIGDLIWASTMAWALEETPCRSARLLAIYDENNQHEILQR ECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHH YFRRRGFNTVRKVGSSPLDLPLRLVWGGAGAFMVGNCEKVFERSYRSWSE HHHHCCCHHHHHHCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA