Click here to switch to the map view.

The map label for this gene is salY [H]

Identifier: 124025673

GI number: 124025673

Start: 886876

End: 888105

Strand: Reverse

Name: salY [H]

Synonym: NATL1_09661

Alternate gene names: 124025673

Gene position: 888105-886876 (Counterclockwise)

Preceding gene: 124025674

Following gene: 124025672

Centisome position: 47.63

GC content: 35.53

Gene sequence:

>1230_bases
ATGAAAAGAAAACTCCCGCTTGCTGAAACTTCGGGAATGGCAATAAAGAATCTTAAGTCAAATAAGTTTAGAAGCTTATT
AACAATGCTAGGAATAGTGATTGGAAATGCTTCTGTCATAACACTTGTAGGTGTAGGGAGAGGAGCACAAAATCTTGCTG
AAAATCAACTAAGCAATCTTGGAGCAAATGTTTTATTTGTTGTCCCTGGGAATAATGACACAAGAAGAAGAGGAGTGGCT
TTTCCCAAAAATCTCGTTCTTAAAGATGCAAAAGCAATAAAAGAACAAGTTCCTACTGTTAAGAGAGTCGCCCCACAAAT
ATCATCTAATGAAGTCATCCAAACTGGTTCTAAAAGTACTAGTAGTTCTATTTCAGGGGTTACGAGTGACTTCTTAATTG
TAAGAAGCTTTGAAATTGCTAAAGGTCGTTTTATCAATAATCAAGATACAAAAGGAGCTAAGAACGTAGTGGTAATTGGT
CCCGATCTTGAAGAGAAACTTTTTAAAAATAGAGAAGGTTTAGGAGAGCGGATAAGAATAAAAGATCAGTCTTTTGAAAT
TGTGGGAGTAATGAAGCCTAAAGGTGCTGTATTTGGAAATAATCAAGACGAAAACGCTTACATTCCTTTATCCACAATGG
TCAGCAGAATTACTGGAAAAGATCCAACATATGGAGTTAGTCTAAGTTTCATAAGTGTTGAAGCAATAAATGAAAAATCA
ACAAAGGCTGCAAAATTTCAAATAACAAACTTATTAAGACAACGACATAAAATAATTAGAGATGATGACTTTGCTGTTAG
ATCTCAAAAAGATGCTTTGCAAATAGTTTCAACTATTACGGGCGGTTTAACATTAATGCTTGCTGCAATAGGAGGTATTT
CATTATTAGTTGGTGGAATAGGCATTATGAATATCATGCTGGTATCTGTTAGCGAAAGAACTGAAGAAATAGGCCTTAGG
AAAGCATTAGGAGCTAGAAGACTTGATATATCAACACAATTCCTAATTGAATCATTAATTCTTTCTAGTCTAGGCGGAAT
TGCAGGAACAGGTTTAGGACTAACCACTGTAAAAGTCGTAGCCTTATTAACACCTCTACCTGCAACAATTGGACTTGGTA
CTGTCTTCATAACAGTTATAATTTCCGGTACAATAGGTTTGACTTTTGGTGTTCTGCCAGCAAAAAGAGCCGCAAAACTA
GATCCAATTACCGCACTAAGAAGTTTATAA

Upstream 100 bases:

>100_bases
AGCTGGAACACTATCAGGGGTAAGTGGGTCAACAGACTTGGTAAAGGTTGGGATAGTTAGTTCAGAAGATGAAAATGAAT
CTTTATTTATCTAAAAACAT

Downstream 100 bases:

>100_bases
ATATGATTTTTCTATCAAAAGTATTGGCTATTTCATGAACTTTCGAAATATCATTTTTTAAATCTTTCTGAGAAACTGAT
GAAACCATCCAACAGAAAGG

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKRKLPLAETSGMAIKNLKSNKFRSLLTMLGIVIGNASVITLVGVGRGAQNLAENQLSNLGANVLFVVPGNNDTRRRGVA
FPKNLVLKDAKAIKEQVPTVKRVAPQISSNEVIQTGSKSTSSSISGVTSDFLIVRSFEIAKGRFINNQDTKGAKNVVVIG
PDLEEKLFKNREGLGERIRIKDQSFEIVGVMKPKGAVFGNNQDENAYIPLSTMVSRITGKDPTYGVSLSFISVEAINEKS
TKAAKFQITNLLRQRHKIIRDDDFAVRSQKDALQIVSTITGGLTLMLAAIGGISLLVGGIGIMNIMLVSVSERTEEIGLR
KALGARRLDISTQFLIESLILSSLGGIAGTGLGLTTVKVVALLTPLPATIGLGTVFITVIISGTIGLTFGVLPAKRAAKL
DPITALRSL

Sequences:

>Translated_409_residues
MKRKLPLAETSGMAIKNLKSNKFRSLLTMLGIVIGNASVITLVGVGRGAQNLAENQLSNLGANVLFVVPGNNDTRRRGVA
FPKNLVLKDAKAIKEQVPTVKRVAPQISSNEVIQTGSKSTSSSISGVTSDFLIVRSFEIAKGRFINNQDTKGAKNVVVIG
PDLEEKLFKNREGLGERIRIKDQSFEIVGVMKPKGAVFGNNQDENAYIPLSTMVSRITGKDPTYGVSLSFISVEAINEKS
TKAAKFQITNLLRQRHKIIRDDDFAVRSQKDALQIVSTITGGLTLMLAAIGGISLLVGGIGIMNIMLVSVSERTEEIGLR
KALGARRLDISTQFLIESLILSSLGGIAGTGLGLTTVKVVALLTPLPATIGLGTVFITVIISGTIGLTFGVLPAKRAAKL
DPITALRSL
>Mature_409_residues
MKRKLPLAETSGMAIKNLKSNKFRSLLTMLGIVIGNASVITLVGVGRGAQNLAENQLSNLGANVLFVVPGNNDTRRRGVA
FPKNLVLKDAKAIKEQVPTVKRVAPQISSNEVIQTGSKSTSSSISGVTSDFLIVRSFEIAKGRFINNQDTKGAKNVVVIG
PDLEEKLFKNREGLGERIRIKDQSFEIVGVMKPKGAVFGNNQDENAYIPLSTMVSRITGKDPTYGVSLSFISVEAINEKS
TKAAKFQITNLLRQRHKIIRDDDFAVRSQKDALQIVSTITGGLTLMLAAIGGISLLVGGIGIMNIMLVSVSERTEEIGLR
KALGARRLDISTQFLIESLILSSLGGIAGTGLGLTTVKVVALLTPLPATIGLGTVFITVIISGTIGLTFGVLPAKRAAKL
DPITALRSL

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=401, Percent_Identity=34.9127182044888, Blast_Score=200, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43601; Mature: 43601

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKLPLAETSGMAIKNLKSNKFRSLLTMLGIVIGNASVITLVGVGRGAQNLAENQLSNL
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHC
GANVLFVVPGNNDTRRRGVAFPKNLVLKDAKAIKEQVPTVKRVAPQISSNEVIQTGSKST
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEECCCCCC
SSSISGVTSDFLIVRSFEIAKGRFINNQDTKGAKNVVVIGPDLEEKLFKNREGLGERIRI
CCHHCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEEE
KDQSFEIVGVMKPKGAVFGNNQDENAYIPLSTMVSRITGKDPTYGVSLSFISVEAINEKS
ECCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEEEECCCCC
TKAAKFQITNLLRQRHKIIRDDDFAVRSQKDALQIVSTITGGLTLMLAAIGGISLLVGGI
HHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIMNIMLVSVSERTEEIGLRKALGARRLDISTQFLIESLILSSLGGIAGTGLGLTTVKVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ALLTPLPATIGLGTVFITVIISGTIGLTFGVLPAKRAAKLDPITALRSL
HHHCCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHCCCCHHHHHHCC
>Mature Secondary Structure
MKRKLPLAETSGMAIKNLKSNKFRSLLTMLGIVIGNASVITLVGVGRGAQNLAENQLSNL
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHC
GANVLFVVPGNNDTRRRGVAFPKNLVLKDAKAIKEQVPTVKRVAPQISSNEVIQTGSKST
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEECCCCCC
SSSISGVTSDFLIVRSFEIAKGRFINNQDTKGAKNVVVIGPDLEEKLFKNREGLGERIRI
CCHHCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEEE
KDQSFEIVGVMKPKGAVFGNNQDENAYIPLSTMVSRITGKDPTYGVSLSFISVEAINEKS
ECCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEEEECCCCC
TKAAKFQITNLLRQRHKIIRDDDFAVRSQKDALQIVSTITGGLTLMLAAIGGISLLVGGI
HHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIMNIMLVSVSERTEEIGLRKALGARRLDISTQFLIESLILSSLGGIAGTGLGLTTVKVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ALLTPLPATIGLGTVFITVIISGTIGLTFGVLPAKRAAKLDPITALRSL
HHHCCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA