| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is pykF [H]
Identifier: 124025674
GI number: 124025674
Start: 888112
End: 889569
Strand: Reverse
Name: pykF [H]
Synonym: NATL1_09671
Alternate gene names: 124025674
Gene position: 889569-888112 (Counterclockwise)
Preceding gene: 124025676
Following gene: 124025673
Centisome position: 47.7
GC content: 38.34
Gene sequence:
>1458_bases ATGAAAATACTCGACCTAGCCAGAAGGACCAAGATTGTAGCTACGATAGGACCCGCAACTGAGAGTGCGAGTCAAATAAG CAAGTTAGTAGAGGCCGGTGCAACTACTTTCCGTCTAAATTTTAGTCATGGTGATCATGAAGAACATGCTCAAAGAATAA AAACAATTAGAAAAGTTTCTGACGATCTAGGCATTCACATAGGAATCCTTCAGGATCTTCAGGGGCCTAAGATTAGACTT GGTAGATTTAAAAATGGCCCAGTTAATGTCAAAAATGGCGATAAATTTATTCTTACATCGAAAAATATTGAATGTAATCA GGACCAAGCAAATGTCACTTACGACAAGCTAGCTGAAGAAGTAAATGTTGGAAATCGAATTCTGTTGGATGATGGAAGGG TAGAGATGAAAGTTGAAGAAGTAGATATAAAAGAACAAAGATTAATTTGTTCAATAACTGTGGGTGGGGTTCTATCTAAT AACAAAGGAGTTAATTTCCCTGATGTTCAACTCTCCATAAGGGCTTTAACAGACAAAGATAAAAAAGATCTAGCATTTGG TTTAAAACAAGGTGTTGATTGGGTAGCACTAAGTTTTGTAAGAAATCCTTCTGATTTAATAGAAATAAAAGATTTAATTA GAAATCATGGATATGACACTCCAGTAGTTGCGAAGATAGAAAAATTTGAAGCAATTGATCAAATAGACGCTGTCTTAAAA TTATGTGATGGAGTCATGGTTGCTAGAGGTGATCTCGGTGTAGAGATGCCAGCAGAAGAAGTTCCACTATTACAAAAACA ACTTATCAAAAAGGCAAACAGCCTTGGCATACCAATAATTACAGCCACACAAATGCTTGATTCAATGGCCTCAAGCCCAA GGCCTACAAGAGCAGAGGTGAGTGATGTTGCAAATGCAATACTCGATGGCACGGATGCTGTAATGCTCTCAAATGAGACT GCAGTGGGTGATTATCCCATTGAGGCTGTGGCGACTATGGCTACTATTGCGAAAAGAATCGAACGAGATTATCCACAAAA AGCATTAGAAAGTCATCTTCCAAGCACTATTCCAAATGCTATTAGTGCGGCTGTAAGCAGTATTGCTAGACAAATAAACG CTGCCGCAATAATACCTTTAACTAAAAGTGGTGCTACCGCCAAAAACGTAAGCAAGTTTAGACCTCCCACTCCAGTATTA GCAGTAACTAATGAAAAGAGTGTTGCCAGCACACTTCAACTTGTCTGGGGAGTAACGCCCCTTCTAATAGAAAATCAAAC AAGCACATCAAAAACATTTGTTGATGCCATGAATATGGCCAAAAAAATGAAAATCCTCAAGCAAGGAGATCTTGTTGTTG AGACAGCTGGAACACTATCAGGGGTAAGTGGGTCAACAGACTTGGTAAAGGTTGGGATAGTTAGTTCAGAAGATGAAAAT GAATCTTTATTTATCTAA
Upstream 100 bases:
>100_bases TTTGATAATCATTTAATTCCATCTTTATTCTCCTGAAAAAGTAAAGTTGACAAATAAAACACAATCAGATGTTAGTTTTT TGTTATCACAAGTCACATAA
Downstream 100 bases:
>100_bases AAACATATGAAAAGAAAACTCCCGCTTGCTGAAACTTCGGGAATGGCAATAAAGAATCTTAAGTCAAATAAGTTTAGAAG CTTATTAACAATGCTAGGAA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MKILDLARRTKIVATIGPATESASQISKLVEAGATTFRLNFSHGDHEEHAQRIKTIRKVSDDLGIHIGILQDLQGPKIRL GRFKNGPVNVKNGDKFILTSKNIECNQDQANVTYDKLAEEVNVGNRILLDDGRVEMKVEEVDIKEQRLICSITVGGVLSN NKGVNFPDVQLSIRALTDKDKKDLAFGLKQGVDWVALSFVRNPSDLIEIKDLIRNHGYDTPVVAKIEKFEAIDQIDAVLK LCDGVMVARGDLGVEMPAEEVPLLQKQLIKKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPIEAVATMATIAKRIERDYPQKALESHLPSTIPNAISAAVSSIARQINAAAIIPLTKSGATAKNVSKFRPPTPVL AVTNEKSVASTLQLVWGVTPLLIENQTSTSKTFVDAMNMAKKMKILKQGDLVVETAGTLSGVSGSTDLVKVGIVSSEDEN ESLFI
Sequences:
>Translated_485_residues MKILDLARRTKIVATIGPATESASQISKLVEAGATTFRLNFSHGDHEEHAQRIKTIRKVSDDLGIHIGILQDLQGPKIRL GRFKNGPVNVKNGDKFILTSKNIECNQDQANVTYDKLAEEVNVGNRILLDDGRVEMKVEEVDIKEQRLICSITVGGVLSN NKGVNFPDVQLSIRALTDKDKKDLAFGLKQGVDWVALSFVRNPSDLIEIKDLIRNHGYDTPVVAKIEKFEAIDQIDAVLK LCDGVMVARGDLGVEMPAEEVPLLQKQLIKKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPIEAVATMATIAKRIERDYPQKALESHLPSTIPNAISAAVSSIARQINAAAIIPLTKSGATAKNVSKFRPPTPVL AVTNEKSVASTLQLVWGVTPLLIENQTSTSKTFVDAMNMAKKMKILKQGDLVVETAGTLSGVSGSTDLVKVGIVSSEDEN ESLFI >Mature_485_residues MKILDLARRTKIVATIGPATESASQISKLVEAGATTFRLNFSHGDHEEHAQRIKTIRKVSDDLGIHIGILQDLQGPKIRL GRFKNGPVNVKNGDKFILTSKNIECNQDQANVTYDKLAEEVNVGNRILLDDGRVEMKVEEVDIKEQRLICSITVGGVLSN NKGVNFPDVQLSIRALTDKDKKDLAFGLKQGVDWVALSFVRNPSDLIEIKDLIRNHGYDTPVVAKIEKFEAIDQIDAVLK LCDGVMVARGDLGVEMPAEEVPLLQKQLIKKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPIEAVATMATIAKRIERDYPQKALESHLPSTIPNAISAAVSSIARQINAAAIIPLTKSGATAKNVSKFRPPTPVL AVTNEKSVASTLQLVWGVTPLLIENQTSTSKTFVDAMNMAKKMKILKQGDLVVETAGTLSGVSGSTDLVKVGIVSSEDEN ESLFI
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=491, Percent_Identity=38.4928716904277, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI10835121, Length=491, Percent_Identity=38.4928716904277, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=37.4233128834356, Blast_Score=318, Evalue=8e-87, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=37.4233128834356, Blast_Score=318, Evalue=8e-87, Organism=Homo sapiens, GI33286418, Length=491, Percent_Identity=37.8818737270876, Blast_Score=318, Evalue=1e-86, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=36.551724137931, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=36.551724137931, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=32.7731092436975, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=32.7731092436975, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=31.4814814814815, Blast_Score=119, Evalue=7e-27, Organism=Escherichia coli, GI1787965, Length=473, Percent_Identity=43.1289640591966, Blast_Score=363, Evalue=1e-101, Organism=Escherichia coli, GI1788160, Length=474, Percent_Identity=41.7721518987342, Blast_Score=335, Evalue=4e-93, Organism=Caenorhabditis elegans, GI17544584, Length=481, Percent_Identity=38.2536382536383, Blast_Score=329, Evalue=2e-90, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=38.477366255144, Blast_Score=297, Evalue=9e-81, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=38.477366255144, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=38.477366255144, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=38.477366255144, Blast_Score=296, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6319279, Length=479, Percent_Identity=39.4572025052192, Blast_Score=298, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=37.5770020533881, Blast_Score=293, Evalue=6e-80, Organism=Drosophila melanogaster, GI24648964, Length=488, Percent_Identity=38.5245901639344, Blast_Score=309, Evalue=3e-84, Organism=Drosophila melanogaster, GI28571814, Length=488, Percent_Identity=38.5245901639344, Blast_Score=309, Evalue=3e-84, Organism=Drosophila melanogaster, GI24648966, Length=436, Percent_Identity=39.4495412844037, Blast_Score=303, Evalue=2e-82, Organism=Drosophila melanogaster, GI24581235, Length=509, Percent_Identity=33.9882121807466, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24646914, Length=298, Percent_Identity=36.9127516778523, Blast_Score=189, Evalue=4e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 52419; Mature: 52419
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILDLARRTKIVATIGPATESASQISKLVEAGATTFRLNFSHGDHEEHAQRIKTIRKVS CCHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH DDLGIHIGILQDLQGPKIRLGRFKNGPVNVKNGDKFILTSKNIECNQDQANVTYDKLAEE HHCCEEEEEHHCCCCCCEEECCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHH VNVGNRILLDDGRVEMKVEEVDIKEQRLICSITVGGVLSNNKGVNFPDVQLSIRALTDKD HCCCCEEEEECCCEEEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCCEEEEEECCCCC KKDLAFGLKQGVDWVALSFVRNPSDLIEIKDLIRNHGYDTPVVAKIEKFEAIDQIDAVLK HHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKQLIKKANSLGIPIITATQMLDSMASSPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPIEAVATMATIAKRIERDYPQKALESHLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH ISAAVSSIARQINAAAIIPLTKSGATAKNVSKFRPPTPVLAVTNEKSVASTLQLVWGVTP HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCC LLIENQTSTSKTFVDAMNMAKKMKILKQGDLVVETAGTLSGVSGSTDLVKVGIVSSEDEN EEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCC ESLFI CCCCC >Mature Secondary Structure MKILDLARRTKIVATIGPATESASQISKLVEAGATTFRLNFSHGDHEEHAQRIKTIRKVS CCHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH DDLGIHIGILQDLQGPKIRLGRFKNGPVNVKNGDKFILTSKNIECNQDQANVTYDKLAEE HHCCEEEEEHHCCCCCCEEECCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHH VNVGNRILLDDGRVEMKVEEVDIKEQRLICSITVGGVLSNNKGVNFPDVQLSIRALTDKD HCCCCEEEEECCCEEEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCCEEEEEECCCCC KKDLAFGLKQGVDWVALSFVRNPSDLIEIKDLIRNHGYDTPVVAKIEKFEAIDQIDAVLK HHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKQLIKKANSLGIPIITATQMLDSMASSPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPIEAVATMATIAKRIERDYPQKALESHLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH ISAAVSSIARQINAAAIIPLTKSGATAKNVSKFRPPTPVLAVTNEKSVASTLQLVWGVTP HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCC LLIENQTSTSKTFVDAMNMAKKMKILKQGDLVVETAGTLSGVSGSTDLVKVGIVSSEDEN EEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCC ESLFI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]