Click here to switch to the map view.

The map label for this gene is 124025649

Identifier: 124025649

GI number: 124025649

Start: 870117

End: 870620

Strand: Reverse

Name: 124025649

Synonym: NATL1_09421

Alternate gene names: NA

Gene position: 870620-870117 (Counterclockwise)

Preceding gene: 124025650

Following gene: 124025646

Centisome position: 46.69

GC content: 28.57

Gene sequence:

>504_bases
GTGTCATGCTACATTCAAAAGAATAGAAGTCCTAGAAAAAATATAGTGGAGTTCATAGAATTTATAGATAGAACAGAAGT
AGAAATAATAAGGATGATTGAAAAGGCGGGATATAAGACAGCAGAAAATACAAAACTATGTTTGTTAGGTGAGAACTATG
TAGGTTTTTTTAATCGTGTAAAAAAGGAAATTATTATTTGTACAAATAACGCAAAGAAGAGAGAAGGATATAAGCATCTA
AGAAAGAAAAATAAGGATGTCTTTGAAAGGACAGCTTTACATATAAAAAAAGCTGTAAGGCATGAAGCTGTTCATGTCGC
ACAAGAGTGCAATAATGGAAAGTTATTAAAAATAGATAGAAAGCTATCAATAAATCCATCGAAGATCAATGCTTTTATTG
GATCTATTAGAATTTCAAGAGAGGAAGAAAAAGAAAGACAAGCATATATATTAGAAGATAAGCCAAGATTAGTAAAAAAT
AAATTAATAAAATATTGTCTATAA

Upstream 100 bases:

>100_bases
GTATAAAAACAACAAATATAGAAAATATTCCAACTATATATGCTAATTAGAAGTTAGTATAATATTTAACAATGATGCTA
CATATTAAAATTCAAACTGA

Downstream 100 bases:

>100_bases
TATTTTATTAATATTAATTGCCTCTAAGTAACTGAATAGCGTTTAATTTACTACTGAAAATTAAAACCATTCCTTGCTCC
AAATAAGAAAGACCAATACA

Product: Serine hydroxymethyltransferase

Products: NA

Alternate protein names: Serine Hydroxymethyltransferase-Like

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSCYIQKNRSPRKNIVEFIEFIDRTEVEIIRMIEKAGYKTAENTKLCLLGENYVGFFNRVKKEIIICTNNAKKREGYKHL
RKKNKDVFERTALHIKKAVRHEAVHVAQECNNGKLLKIDRKLSINPSKINAFIGSIRISREEEKERQAYILEDKPRLVKN
KLIKYCL

Sequences:

>Translated_167_residues
MSCYIQKNRSPRKNIVEFIEFIDRTEVEIIRMIEKAGYKTAENTKLCLLGENYVGFFNRVKKEIIICTNNAKKREGYKHL
RKKNKDVFERTALHIKKAVRHEAVHVAQECNNGKLLKIDRKLSINPSKINAFIGSIRISREEEKERQAYILEDKPRLVKN
KLIKYCL
>Mature_166_residues
SCYIQKNRSPRKNIVEFIEFIDRTEVEIIRMIEKAGYKTAENTKLCLLGENYVGFFNRVKKEIIICTNNAKKREGYKHLR
KKNKDVFERTALHIKKAVRHEAVHVAQECNNGKLLKIDRKLSINPSKINAFIGSIRISREEEKERQAYILEDKPRLVKNK
LIKYCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19694; Mature: 19563

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCYIQKNRSPRKNIVEFIEFIDRTEVEIIRMIEKAGYKTAENTKLCLLGENYVGFFNRV
CCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH
KKEIIICTNNAKKREGYKHLRKKNKDVFERTALHIKKAVRHEAVHVAQECNNGKLLKIDR
HHEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
KLSINPSKINAFIGSIRISREEEKERQAYILEDKPRLVKNKLIKYCL
CCCCCHHHHHHHHHHHHCCCHHHHHHCEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SCYIQKNRSPRKNIVEFIEFIDRTEVEIIRMIEKAGYKTAENTKLCLLGENYVGFFNRV
CCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH
KKEIIICTNNAKKREGYKHLRKKNKDVFERTALHIKKAVRHEAVHVAQECNNGKLLKIDR
HHEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
KLSINPSKINAFIGSIRISREEEKERQAYILEDKPRLVKNKLIKYCL
CCCCCHHHHHHHHHHHHCCCHHHHHHCEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA