Click here to switch to the map view.

The map label for this gene is dcd [H]

Identifier: 124025035

GI number: 124025035

Start: 299548

End: 300141

Strand: Reverse

Name: dcd [H]

Synonym: NATL1_03221

Alternate gene names: 124025035

Gene position: 300141-299548 (Counterclockwise)

Preceding gene: 124025036

Following gene: 124025034

Centisome position: 16.1

GC content: 37.71

Gene sequence:

>594_bases
ATGTTAAAAAACGATCTTTGGATTGCTGAACAGGCTTCACTAGGAATGCTTGAACCTTTTCAAGAAAAGCTAATAAGACA
TCTTGAGCCAGAATCCGAAAAATCTCCTGTTTTAAGCTTTGGTTGCTCATCATATGGATATGATTTACGTCTCTCCTCCA
AAGAGTTTTTGATTTTTAGGCATGTTCCTGGAACAGTAATGAATCCTAAAAAGTTTAATCCTGCCAATTTAGAACCTACA
GATTTAAAAGAAGACGAGGATGGTAAATATTTTATTTTACCTGCTCACTCTTATGGCCTTGGCGTTGCATTAGAGAAAAT
GAAAGTACCGCCAAATATTACAGTTATTTGCCTTGGGAAAAGCACCTACGCCCGTCTAGGGATAATCGTAAATACAACTC
CTGCTGAAGCAAGCTGGGAAGGTCATCTGACCCTGGAATTCAGTAATAGCTCTGGAGCAGATTGCAGGATTTATGCTGAC
GAAGGAATTTGTCAATTACTCTTCTTTGAAGGAGATCCTTGTGAAACAACTTACAGTGATAGGAAAGGTAAATATCAATA
TCAACAAGAAAAAGTAACCCTAGCAAAGGTTTAA

Upstream 100 bases:

>100_bases
TAATCGACCATCATCCACAGATATTATTCTTACAGGACCATCAATCCCTCCTAAAGTAATTGAAATGGCTGATCAAATCA
CTGAATTACGCTGCAATTAA

Downstream 100 bases:

>100_bases
ATATGAGTCGTGTTCAATTAATAACCTCTACGCCAAACGCTGAAAAAAGCATGGCATATATTGCCAGGGTTAGCAATCCA
AAGAATCAGGATAATGATGA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLKNDLWIAEQASLGMLEPFQEKLIRHLEPESEKSPVLSFGCSSYGYDLRLSSKEFLIFRHVPGTVMNPKKFNPANLEPT
DLKEDEDGKYFILPAHSYGLGVALEKMKVPPNITVICLGKSTYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYAD
EGICQLLFFEGDPCETTYSDRKGKYQYQQEKVTLAKV

Sequences:

>Translated_197_residues
MLKNDLWIAEQASLGMLEPFQEKLIRHLEPESEKSPVLSFGCSSYGYDLRLSSKEFLIFRHVPGTVMNPKKFNPANLEPT
DLKEDEDGKYFILPAHSYGLGVALEKMKVPPNITVICLGKSTYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYAD
EGICQLLFFEGDPCETTYSDRKGKYQYQQEKVTLAKV
>Mature_197_residues
MLKNDLWIAEQASLGMLEPFQEKLIRHLEPESEKSPVLSFGCSSYGYDLRLSSKEFLIFRHVPGTVMNPKKFNPANLEPT
DLKEDEDGKYFILPAHSYGLGVALEKMKVPPNITVICLGKSTYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYAD
EGICQLLFFEGDPCETTYSDRKGKYQYQQEKVTLAKV

Specific function: Unknown

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 22136; Mature: 22136

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNDLWIAEQASLGMLEPFQEKLIRHLEPESEKSPVLSFGCSSYGYDLRLSSKEFLIFR
CCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEE
HVPGTVMNPKKFNPANLEPTDLKEDEDGKYFILPAHSYGLGVALEKMKVPPNITVICLGK
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECC
STYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYADEGICQLLFFEGDPCETTYSD
CCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
RKGKYQYQQEKVTLAKV
CCCCEEEECCEEEEECC
>Mature Secondary Structure
MLKNDLWIAEQASLGMLEPFQEKLIRHLEPESEKSPVLSFGCSSYGYDLRLSSKEFLIFR
CCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEE
HVPGTVMNPKKFNPANLEPTDLKEDEDGKYFILPAHSYGLGVALEKMKVPPNITVICLGK
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECC
STYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYADEGICQLLFFEGDPCETTYSD
CCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
RKGKYQYQQEKVTLAKV
CCCCEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA